Strigops habroptila (Kakapo): 115616576
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Entry
115616576 CDS
T08851
Symbol
TMC6
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shab02000
]
115616576 (TMC6)
03037 Cilium and associated proteins [BR:
shab03037
]
115616576 (TMC6)
Transporters [BR:
shab02000
]
Other transporters
Pores ion channels [TC:
1
]
115616576 (TMC6)
Cilium and associated proteins [BR:
shab03037
]
Other cilia and associated proteins
Stereociliary proteins
115616576 (TMC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF6684
Motif
Other DBs
NCBI-GeneID:
115616576
NCBI-ProteinID:
XP_030361876
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All DBs
Position
14:12492480..12500744
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AA seq
814 aa
AA seq
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MGQHGWALGWHWGFATAPGPRAHPSPRRAGLCPHSEEPSPDNEGALHTSFHQLIQEQSSL
MEAGLELEMQERGREPLVRLAPLDTSAAAWPETGQGKQRPGYSSASLRIVASMPSRTIGR
SRGAIISQYYNRTARLRRRSSRPPLQQLCRAARPSLRLYDLESDPAMATLQEKRSLLVKE
LLSLSPSQRSHMLLTVPLCLAEKRALRQELSGQRGPLRHCTQHQAPSPCGGSKDHIVLCC
RELWYRLLSLLPATQPWHYALKQISGRFGSSVLSYFLFLKTLLLFNIISFLILLVFVVAL
QAVYPPASANPQPFTGLELLTGAGYFTHSLLYYGYYSNTTLNSPCTSSPSMCHLAGPPLP
YNMPLAYVSSVGVSFLITCILLVYSMSRSFGESYCVGSSSRDLPVKVFCAWDFKVVQRRS
VKLQCENICTQLKELLAEQRSRSRSRSLCQRLGRAAVLLLAWLLSLGTVLGCAVAVHHFS
QHMHTVQQDHRAQGGGDRQQEALLLALPLVVSVLNAVMPHLYNLLAAWERQDSPGAQVYV
AICRNLILKMVVLGLLCYQWLSRRVVCSMEECWETCVGQDLYRFVVMDFVFTLLDTLLGE
LVWRLVLEKRLKRNQKPEFDIARNVLELIYGQTLTWLGVLFAPLLPAVQVLKLLLLFYIK
KTSLMHNCQSPSKPWQASHMSTVFITLLCFPSFLGAAVFLSYTIWSEQPSETCGPFQGLE
TIYKSWQTWVQVLEKSNPNITWFAWAQQHLVENPFLLFFMSGVLLAGIYFNIQVVRGQRR
VIRLLKEQIANEGEDKAFLIQKLHSVYEQRERRT
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggggcagcatggctgggctttgggctggcactggggctttgccacggctccgggcccc
agagcccaccccagccctaggagagcgggtctgtgtcctcacagcgaggagccaagcccg
gacaacgaaggagccctgcacacctccttccaccagctcatccaggagcagagcagcttg
atggaggcaggtctggagctggagatgcaggagaggggcagagagcccctggtccgcctg
gcccccctggacaccagtgctgcagcctggccagagactgggcagggcaagcagcgccct
gggtactcctccgcttctctgcggatcgtcgccagcatgcccagccgcaccatcgggcgc
agccgtggggccatcatctcccagtactacaaccgcacggcgcggctgcggcgccggagc
agccgcccgccactgcagcagctctgccgcgcggcgcggcccagcctgcggctgtatgac
ctggagagcgaccctgccatggccacgctgcaggagaagcggagcctgctggtgaaggag
ctgctgagcctctcgcccagccagcgcagccacatgctgctcaccgtgcccctctgcctg
gcagagaaacgcgccctccggcaggagctgagcgggcagaggggccccctgaggcactgc
acccagcaccaggcgccctctccctgcggagggtccaaggaccacattgtcctctgctgc
cgggagctctggtacaggctcctgtccctgctccctgccacgcagccctggcactacgca
ctgaagcagatcagtggccgctttggctccagtgtcctctcctacttcctcttcctcaag
acgctccttttgttcaacatcatctcattcctcatcctcctggtctttgtggtggccctg
caggctgtgtatcctcctgcctcggccaacccccagcccttcactggcctcgagctcctc
acaggagcgggctacttcactcactcgctgctctactacggctactacagcaacaccacc
ctcaacagcccctgcacctccagccccagcatgtgccacctcgcaggccccccgctccca
tacaacatgcccctggcctatgtgtccagtgttggggtctccttcctcatcacctgcatc
ctgctggtgtacagcatgtcccgctccttcggggagagctactgtgtgggcagctcctcc
cgggacctgcccgtcaaagtcttctgtgcctgggacttcaaggtggtccagaggcgctcg
gtgaagctgcagtgtgaaaacatctgcacccagctgaaggagctgctggcggagcagcgc
tcccgctcccgctcccggagcctctgccagcgcctgggccgcgccgcggtgctgctgctg
gcctggctgctgtcgctgggcacggtgctgggctgcgccgtggctgtgcaccacttctcg
cagcacatgcacacggtccagcaggaccaccgggcgcagggagggggggatcggcagcag
gaagccctcttgctggccctgccgctcgtggtgtctgtcctcaacgcggtgatgccccat
ctgtacaacctgctggcggcgtgggagaggcaggactcccccggggctcaggtctacgtg
gccatttgcaggaacctcattctgaagatggtggtgctcggtctgctctgctaccagtgg
ctcagccggagggttgtctgctcaatggaggagtgctgggagacgtgtgtggggcaggac
ctgtatcgcttcgtggtgatggactttgtattcacactgctggacacgctcctgggggag
ctggtctggaggctcgtcttggagaagaggctgaagaggaaccagaagcccgagtttgac
atcgcacggaacgtgctggagctgatctatgggcagaccctgacctggctgggtgttctc
ttcgcgccgctcctgccggccgtgcaggtcctgaagctgctgctgctgttctacatcaaa
aagaccagcctgatgcacaactgccagtcccccagcaagccctggcaagcgtctcacatg
agcaccgttttcatcaccctgctctgcttcccgtccttcctgggtgcagccgtcttcctc
tcctacaccatctggtcggagcagccatcagaaacctgtggccccttccaggggctggaa
accatctacaagtcatggcagacctgggtgcaagtgctggagaagtccaaccccaacatc
acctggtttgcctgggcccagcagcacctggtggaaaaccctttcctcctgttctttatg
tctggggtcctgctagccgggatctacttcaacatccaggtggtgagaggccagcggagg
gtcatccgcctgctgaaggagcagatcgccaacgaaggggaagataaagcctttctcatt
cagaagcttcactccgtgtatgagcagagggagagacgcacctga
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