Strigops habroptila (Kakapo): 115616692
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Entry
115616692 CDS
T08851
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03013
Nucleocytoplasmic transport
shab03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115616692 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115616692 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115616692 (NUP153)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115616692 (NUP153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
115616692
NCBI-ProteinID:
XP_030362114
LinkDB
All DBs
Position
1:90243470..90289324
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AA seq
1454 aa
AA seq
DB search
MASDGGGGGVGGGKIRTRRYHLGAAKPPYARSKQQGIISRMTASVKNIVPGWLQKYFNKS
EDECVDANESTDQEENPVNYHHDYANEDTIVIDGRVTPETARINLDEPSTSRSALNYSDV
LTRPSLHRSHLNCTMLDSTVPHCQPSTSSSLGIGSPGLSLVREIKDSTSQHDDDNISTTS
GFSSRASDKDITVSKNTSAPLLWSTEAERSHSLSQHPAASSKKPAFNLSAFGSPSPSLGN
TSVFKTSQLGDSPFYPGKTTYGGAAAAARETKARIAPYQPPVRRQMKAKQANVQSCGVTS
STARRILQSLEKMSSPLADAKRIPSSSPLSSPLDRSGLNITTFQSKRNQMESQLPPVQKL
VTPKAISLSGSRTQYFKPSLTPATDSSKIHQRVATKHKGMREKSFPAEQRVNPSESNLTY
PKFSTPASNGLSSGGVGGGGKMRRERGVHYISKPGQEQQEVEEPVLPKVPLPISAASLPS
FNFNFLASSTVSSSPSTVSTGAMMKVPPASNVGSPVFRFSSPIVKSTEAEVLPPLSQIGF
TFSDPVAKSAERSGSSDTPVTSFLTLDTATVNSTSNKKEKEEYDGPSKPAKVLKEGSVLD
ILKSPGFTSVKTHSPPSAQPVTSTVVYTRPAISSFSAGKDTSKQASSFWQSDTYDPCLQN
KTTDSKCVTCEAAKVSTIESTKQTISSSQCVASKAAVPTAGTLGFEDKFKTAPNTWDCDT
CLVQNKPEATKCIACETPKPGTGVMPALTLPAVTDNAVTVTSSSSSTDTTVTLGFGDKFK
KPKGSWDCAVCLVSNKAEDSKCVACQSEKPGSSVPVTSSSVPAFSAASGGSGGFLDLDKF
KKPEGSWDCEVCLVQNKAEATKCVACESAKPGTKVELKGFGTAAVSTNAAVPSFTFGVPS
SSSESSHTISSTGNFKFGEQESFKFGIASESASSNTVTGGFKFPTGSGGFKFGVSSSDSK
SEDSKKESKSNSFTFGLPSTSNQAPSTFQFGTASLGQQEKKEEPVLGGFGFGTSSTSSIA
TNENKTGVSGFAFGTVAEKEVASPAFAFKKSDEKKDETLPAKGGFSFGSVESAPASQFVL
GRTEEKQDSLVPAAPLAFGKKADNEELKTQPIFSAGTAEHTKEESTAKPIFNFSFVKPSE
KESEQAKPSFAFGAQTSTSDQGAAKPSFSFLSSSSSSTVVPTTSANSSSVFGSAISSLNP
QLVPAPFVFGQPSNTVSSSVFGNSSESAASQSFGFSQENKPATTSSSTGTGLTSFLFGSG
ATSTNAANSGFTFGATTTSSSTGSSSSFPFGSGPPALAAGPAFGTSQPPAFGQSQGSSQP
SAPSFGSLSTTLFSAGTQPAPPAFGSVTSSTQPSVFGQQVAQQPGFGSGTPSAGSVFQFG
SNSSSFNFPNSPGVFTFVANPPAPAAPAQPSGSSGFSFSQPPAFTVGTNGKNIFSASGSS
VSGRKIKTAVRRRK
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggacggcggcggcggaggggtcggcggcggcaagattcggacccggcggtac
cacctgggcgccgcgaagcctccttatgcgaggagtaagcagcagggaatcattagcaga
atgacagcatcggtgaaaaacattgtaccaggatggttacagaagtatttcaataaaagt
gaagatgaatgtgtagatgcaaatgaatctacagaccaggaagagaatccagtaaactat
caccatgattatgcaaatgaagataccatcgtgattgatgggagagtcacgcctgaaaca
gcaagaattaatctagacgaaccatccacgagtagatctgcattgaactactcagatgtg
ttaacaaggccctctcttcatcggagccatttgaactgtaccatgttggattctacagta
ccacattgtcagccctctacatcttcttctcttggcattggcagtcctgggctgtctctt
gtaagagaaataaaagattctacctctcagcatgatgatgataacatctcaacaaccagt
ggcttctcctctagagcatctgataaagatatcacagtttcaaaaaatacttcagcacca
ctgctctggtccacagaagctgaaagatctcattccctctcacagcatcctgcagctagc
tctaaaaaacctgcattcaatttgtctgcttttggatctccctctccttcacttggaaac
acttctgtctttaagacaagccagcttggggattctccattttaccctgggaagaccact
tatggaggcgcagctgcagcagcaagggagacaaaagcacgaattgctccttatcagcca
ccagtaagaagacaaatgaaagctaaacaagcaaatgtgcaatcctgtggtgtgacaagt
tccacagcacggcgcatcttgcagtcattggagaagatgtcaagtcctttggcggatgct
aaaaggattccgtcttctagtccgctttcttctcctttggacaggagtgggctgaatatt
actaccttccaatccaagcgaaaccagatggaatcgcagcttccacctgtccagaaactc
gtgacaccaaaggcaatctctctgtcagggagtcggacccagtattttaaaccatctctg
actccagctactgattccagcaaaattcaccagagggtagctacaaagcacaaaggtatg
agagagaagagttttcctgcagaacagcgagtaaacccatctgaaagcaatttgacctac
cccaaattcagtactcctgcatccaacggtctgtcttcaggaggagtgggtggtggtggc
aagatgagaagggaaagaggagtacactatatatcaaaacctggacaagagcaacaggaa
gtggaagaaccagtactaccgaaagtacccttacccatcagtgctgcatcgctgccttca
ttcaacttcaattttcttgccagtagtactgtctcatcgtcaccaagcactgtctcaaca
ggagcgatgatgaaggtaccaccagcaagtaatgttggcagtcctgtgttcagattttca
tctccaattgtgaaatctactgaggcggaagtgctacctccattgtctcagattgggttt
acatttagtgatcctgttgcaaaatcagcagagcgttctggatccagtgatacaccagtg
acatccttccttactctagataccgccactgtaaacagcaccagcaataagaaggaaaaa
gaagaatacgatggcccctccaaacctgcaaaggtcttaaaggaaggaagtgtgttagac
attctaaaaagccctggctttacctctgtgaaaacacactcccctccatctgcgcagcct
gttacaagcacagtggtctatacaaggcctgcaataagtagtttttctgcaggtaaagac
acctctaaacaagcatcctcattttggcagtctgacacgtatgacccatgtctgcaaaac
aaaaccacggatagcaaatgtgtaacatgtgaagctgctaaagtgtcaacaattgagagt
acgaaacagacaataagctcaagtcaatgtgttgcctctaaggcagcagttcctacagcg
gggacattgggctttgaagacaaatttaaaacagcacccaacacatgggattgtgatacc
tgtctggtccagaacaaacctgaagctacaaaatgtatagcatgtgagacaccaaagccc
ggaacaggagtaatgcctgccctgacattgccagcagtcacagacaacgcggtgacagtg
acatcctcctccagcagcactgacacaacagtcactctggggtttggagacaaatttaag
aagccaaaaggttcttgggactgtgcggtgtgccttgtatcaaataaggcagaagacagc
aaatgtgtagcttgtcagtcagagaaaccagggagttcagtgcctgtgaccagtagcagt
gttcctgcattttctgctgcttctggaggatctggaggatttctggatttagacaagttc
aagaagcctgaaggaagctgggattgtgaggtctgcttggtccaaaacaaagcagaagcc
acaaaatgtgtagcttgtgaaagtgcaaagccaggcaccaaagtagagctcaaaggcttt
ggtactgctgctgtgtccacaaatgctgcagtgccatcatttacattcggtgtcccgtca
tcctcctctgaatcttctcatacaataagtagcacaggaaattttaagtttggagaacaa
gagagcttcaagttcggcattgcatcagaatctgcatcctccaacactgtgactggagga
tttaagtttcctactggttcagggggcttcaaatttggagtttcttcctcagactctaaa
tcagaagacagtaaaaaagaaagtaaaagtaatagttttacttttggacttccatctaca
agcaatcaggctccttcaacatttcagttcgggacagcgagcctgggacagcaggaaaag
aaagaggaaccagttttgggaggctttggttttggcacaagttctacttcttccatagct
accaatgagaataaaaccggggtcagtggcttcgcttttggaactgtggcggaaaaggag
gtagcatcacctgcttttgcatttaagaagtcagatgagaaaaaggatgaaacgcttcca
gcaaagggaggattctcttttggcagtgtggagtctgcacctgcctcacagtttgttttg
ggaaggacagaagagaaacaggactctctcgttcctgctgctccactagcatttggaaag
aaagctgacaatgaagagttaaagacacaacctatcttttcagctgggacggctgagcat
accaaagaggagagcacggcaaaacctatattcaattttagttttgttaaaccatcagag
aaggaaagtgagcaggcaaagccatcttttgcatttggggcacaaaccagtacttcagat
caaggagcagcaaagccatccttcagcttcttgagctctagttcctccagcacagtcgta
cccaccacttcagccaatagcagcagtgtgttcggcagcgccatctcctccttgaatcct
cagctggttcccgctcccttcgtgtttggacaacccagcaacactgtgagcagctctgtt
tttggcaattcttcagaatctgcagcctctcagtcatttggcttctctcaagaaaacaaa
ccagcaactacatcttccagcactggcacaggtcttacttcatttctgtttggctcggga
gccaccagtaccaatgcagcaaattcaggcttcaccttcggagccacaaccacatcgagt
tcaacagggtcatcctcttcgtttccatttggctctgggcctccagcgctggctgccggc
ccagcatttggcaccagtcagccaccagcatttggtcagagccaagggtccagccagcca
agcgctccaagttttggatccctgtcgacaacgttgttttcagctggcactcagcctgct
cctcctgccttcggctccgtgacgagcagcactcagccctctgtgttcggacagcaagtg
gcgcagcagccggggtttggctctggtacccccagtgctggttctgtattccagtttgga
agtaatagttctagtttcaacttcccaaatagcccaggagtatttacttttgttgcgaat
cctcctgcaccagcagcaccggcacagccttctggctcgtcaggattttcgttcagccag
cctccagcttttacagtggggactaacgggaaaaacattttctctgcctctggatcttca
gtttctggtcggaagataaagactgcagttagacgtagaaaataa
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