Strigops habroptila (Kakapo): 115616808
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Entry
115616808 CDS
T08851
Symbol
RHBDL3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shab01002
]
115616808 (RHBDL3)
Enzymes [BR:
shab01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
115616808 (RHBDL3)
Peptidases and inhibitors [BR:
shab01002
]
Serine peptidases
Family S54: Rhomboid family
115616808 (RHBDL3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
DUF5580_M
EF-hand_11
EF-hand_8
EF-hand_9
AIF-1
EF-hand_4
DUF3087
Motif
Other DBs
NCBI-GeneID:
115616808
NCBI-ProteinID:
XP_030362380
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Position
14:8804427..8866203
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AA seq
415 aa
AA seq
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MKKDAGNGTKSFGYFSVLEYTSTVYCMLMSLLLYLLFLLFPPLCIASQHWKALFDQFDPD
NTGYISTEKFRSLLQRHGSELDPHKLEVLLALADSNSEGRICYQDFVNLMSNKRSNSFRQ
AILQGNRRLCSKALLEETGLSLSQRLIRHVAYETLPREIDRKWYYDSYTCCPPPWFMITI
TIVEVAFFLYNGVVLDRFVLQVSHPLYLKNALLYHPQLRAQAWRYLTYIFMHAGIEHLGL
NVVLQLLVGVPLEMVHGAARISFVYIAGVVAGSLAVSVADMTAPVVGSSGGVYALVSAHL
ANIVMNWSGMKCQFKLLRMAVALICMSFEFGRAVWLRFHPSVYPPCPHPSFMAHLGGVVV
GITLGVIILRNYEQRLQDQTLWWIFLSIYVIFVLFAIFWNIFAYSLLDLKLPPPP
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggatgctggaaatggcactaaatcatttggttatttctcagtgttagaatat
acttctacagtttactgcatgttaatgtcgttgctcttataccttctttttcttcttttt
cctcccttatgcattgcctctcagcactggaaagccctatttgatcagtttgatcccgac
aacactggctacatcagcactgagaagttccgctcccttctccagaggcacggctcggag
ctggacccccacaagctggaggtcctgctggccctggcagacagcaactccgaggggagg
atctgctatcaggactttgtcaacctgatgagcaacaaaaggtcgaacagcttccggcaa
gccatcctgcaggggaaccggaggctgtgcagcaaggcactgctggaggagacggggctc
agcctttcccagaggctcatccggcacgttgcgtatgaaaccctgccccgagagatagac
cgcaagtggtactacgacagctacacctgctgccctccaccctggttcatgataaccatc
actatcgtagaggttgccttttttctttacaacggagtggtattagacagatttgtgctg
caagtcagccatcccttatacctgaagaacgcattactttaccatcctcagctccgtgct
caggcttggaggtacctaacctacatattcatgcatgcagggatagaacaccttggactc
aatgttgtcctccagctcttggttggggttcccctggaaatggtgcatggcgctgcgagg
atcagttttgtgtacattgctggagttgtggcagggtccctggcagtgtcagtagctgat
atgactgcgcctgtggtgggctcctctggaggcgtgtatgctcttgtctcagcccacttg
gccaatatagtcatgaactggtcaggaatgaagtgccaattcaaactgctgcgcatggct
gttgccttgatctgtatgagctttgaatttggaagagccgtgtggctgcgattccacccc
tccgtttacccaccctgcccacaccccagcttcatggctcacctgggaggggtggtggtt
ggaatcaccctcggtgtcatcatcctgaggaactatgagcagagactccaagatcagact
ttatggtggatcttcctttctatttatgtcatttttgtcttgtttgccatcttctggaac
atttttgcctacagcctgttggatctaaagctacctccccctccctga
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