Strigops habroptila (Kakapo): 115616949
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Entry
115616949 CDS
T08851
Symbol
TTF1
Name
(RefSeq) transcription termination factor 1 isoform X1
KO
K15225
transcription termination factor 1
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shab03021
]
115616949 (TTF1)
Transcription machinery [BR:
shab03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
115616949 (TTF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
115616949
NCBI-ProteinID:
XP_030362680
UniProt:
A0A672UMI3
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Position
15:4618990..4629190
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AA seq
1006 aa
AA seq
DB search
MTEKASADDFQVQDFLKKKKKKKRKHKEYDKEHENDERESIQNAELSSVSLPLLEEQEAQ
SGEGCKKKKKKKKQEKEQSLLDNPCVELEHDISNETGVDASQKKKKKKKRKHNDNMDEES
NAVTCIAVNQSSCDICQESDADYIYLKPSVKKERNQKLPEEGEVHELPESVYLEPPVKKK
KRKEKLPEENEVHELPESVYLEPPVKKKKRKEKLPEENEVHELPESVYLEPPVKKKKRKE
KLPEESEVHELPESVYLEPPVKEKKTKEKLPEESEVHELPESVYSEPPVKEKKTKEKLPE
VSEVHELPESVYLEPPVKKKKRKKKLPEEGEIQELPDSIYLEPPVKEKKTKEKLPEEDEV
HELPESVYLEPPVKKKKRKKKLPEEGEVQELPDSIYLEPLVKEKKTKEKLPEEDEVHELP
ESVYLEPPVKKKKRKEKLPEENEVQELPASEIHDTNGSKRSKKKKKKKKTYSSALDIQEA
ADVTIDQSLLSLAEQNRQGEDTELLLATEADGVASPQQWHEDGDCDASAARSEDSMDVSA
NFSELTEAANQSPKKPPVRCTKIKSRAFITDESSSDSDVMTPEPSASNRREDQSSSFTET
VATEEGSLDDDEEYLSSIMCSFIDLDTAKQELEEFIPHVRNISDSSVMKMAGRDLRRFKQ
FKKQGIAVRFGRFSEQENDQIRKNIEEFLQITGIDSAEKLLFTSRYPEEKKTISRLKAEY
LFCEKLSEGIPRPWRLIYYRARKIFDPNNYKGRYTKEEKEKLKKYYALHGNDWKKISEIM
SRSNLSVAMKYSEIKSAVNYGPWSKEETQKLMRAVEEVIRKRIEVEDGNSLSLLEKSNRE
ILIDREKLYQKLPWSEIETKVGTRYWRQCKQKWSTILINKMNKGQQLYRGTKGLQAKINL
IKRLYEMNVEDPNEVNWEELSGVIGDVPRAYVQGKFYKLKVSCVPLWQKRTFSEIIGYLY
EKKLPELEERLEKEKGKNLSPDNPAPGQQKKAFRLSEIFDSSEESD
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaaagcaagtgcagatgattttcaagttcaggattttctgaagaagaagaag
aagaaaaagagaaaacacaaagaatatgataaggaacatgaaaatgatgaaagagaaagc
atacagaatgcagagcttagctctgtttctctacctctgcttgaagagcaagaagcacag
agtggtgaaggctgtaaaaagaagaaaaaaaaaaagaagcaggagaaggaacagtctttg
ttagataatccttgcgtagaactggaacatgacattagtaatgaaactggagtggatgct
tcccaaaagaaaaagaagaaaaagaagaggaagcataatgataatatggatgaggaaagt
aatgctgtaacttgtatcgcagtaaatcagagtagctgtgatatttgtcaggagagtgat
gctgattacatttatttaaaaccttctgtgaagaaagaaagaaaccaaaaattacctgaa
gagggtgaggtacatgagctgcctgaatccgtttatttagaaccacccgtaaagaagaag
aaaagaaaagaaaaattacctgaagagaatgaggtacacgagctgcctgaatctgtttat
ttagaaccacctgtaaagaagaagaaaagaaaagaaaaattacctgaagagaatgaggta
catgagctgcctgaatccgtttatttagaaccacctgtaaagaagaagaaaagaaaagaa
aaattacctgaagagagtgaggtacatgagctgcctgaatctgtttatttagaaccaccg
gtgaaggagaagaaaacaaaagaaaaattacctgaagagagtgaggtacatgagctgcct
gaatctgtttattcagaaccaccagtgaaggagaagaaaacaaaagaaaaattacctgaa
gtgagtgaggtacatgagctgcctgaatctgtttatttagaaccacctgtaaagaagaaa
aaaagaaagaagaaattacctgaagagggtgagatacaagagctgcctgattccatttat
ttagaaccaccggtgaaggagaagaaaacaaaagaaaaattacctgaagaggatgaggta
catgagctgcctgaatctgtttatttagaaccacctgtaaagaagaagaaaagaaagaag
aaattgcctgaagagggtgaggtacaagagctgcctgattccatttatttagaaccactg
gtgaaggagaagaaaacaaaagaaaaattacctgaagaggatgaggtacacgagctgcct
gaatctgtttatttagaaccacctgtaaagaagaagaaaagaaaagaaaaattacctgaa
gagaatgaggtacaagagctgcctgcctcagaaatacatgacacaaatggcagtaaaaga
tcaaaaaagaagaagaagaagaagaaaacatacagcagtgccctagatatacaagaagca
gcagatgtaaccattgaccagtcactgttgtcacttgcagagcaaaacaggcaaggggaa
gacacagagctgctgttagctacagaagcggatggtgtagcgtcgccccagcaatggcac
gaagatggtgactgtgatgcttctgctgccaggagtgaagattctatggatgtatctgct
aatttttctgagctgactgaagcagctaatcagtctcctaaaaaacctccagtgcgctgt
acgaagataaaaagcagagcttttatcacagacgaaagttcttcagattctgatgtaatg
acaccagaaccctcagcatcaaatagaagggaggaccagagtagttcctttactgaaaca
gtagccacagaggagggtagcctggatgatgacgaagagtacctgagctctatcatgtgt
tcattcatagatttggatactgcaaaacaggaactggaagagtttattcctcatgtgagg
aatatatcggacagttcagtcatgaagatggctggaagagacctaaggaggtttaaacag
tttaaaaaacaaggtattgctgtcaggtttggcagattttcggagcaggagaatgatcaa
atccggaaaaatattgaagagttcttacagattactggcatagacagtgctgagaaactc
ctgtttacctcgaggtatccagaagagaaaaaaactatcagtcgcttaaaagcagaatat
cttttctgtgaaaaactttctgagggcataccacgaccttggaggctgatatattatcga
gcaaggaagatctttgacccaaataattataaagggaggtacactaaggaagaaaaagaa
aaattgaagaagtattatgctctgcatggcaatgattggaagaagatttctgagataatg
tcgcgttctaacctctcagttgctatgaaatactctgaaatcaagtcagctgttaattat
ggcccttggtcaaaggaagagacccagaagttaatgcgtgcagtggaggaggtgattagg
aagagaatagaagtggaagatggaaattctctttccttactggaaaagtcaaatagagag
atcttaattgaccgtgagaaactgtaccagaaattaccgtggtctgagattgaaactaaa
gtgggaactcgatattggagacaatgtaaacagaaatggagtacaattttaataaacaag
atgaacaaagggcagcagttatatagggggaccaaaggattacaagccaagatcaatctt
attaaaaggttgtatgaaatgaatgtggaggatcctaatgaagtaaactgggaagaactc
agtggtgttattggagatgtccctagagcctatgttcaaggaaaattttataagctaaaa
gtctcctgtgtccctttatggcaaaaaaggactttttctgaaattattggttatctttat
gaaaagaaacttccagaacttgaagaaaggcttgaaaaagagaaggggaaaaaccttagt
cctgacaacccagcacctgggcaacagaagaaggctttccgactcagtgagatttttgac
tccagtgaagagagcgattaa
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