Strigops habroptila (Kakapo): 115616973
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Entry
115616973 CDS
T08851
Symbol
ABCA2
Name
(RefSeq) ATP-binding cassette sub-family A member 2 isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab02010
ABC transporters
shab04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115616973 (ABCA2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
115616973 (ABCA2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shab02000
]
115616973 (ABCA2)
Transporters [BR:
shab02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
115616973 (ABCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
ABC2_membrane_2
Motif
Other DBs
NCBI-GeneID:
115616973
NCBI-ProteinID:
XP_030362767
LinkDB
All DBs
Position
15:11777237..11809711
Genome browser
AA seq
2506 aa
AA seq
DB search
MGFLHQLHLLLWKNVTLKRRSPWVLTFEIFIPLVLFFILLGLRQKKPTIPVKEVSFYTAA
PLTSAGILPVMQSLCPDGQRDEFGFLQYSNSTVTQLLEHLTEAVEQSSLFDPEHPGLEEE
LESLRRHLEALSSSEPSSMETHFSNTAGSGFTLAWAAKDRGELHRFLTQNLSLPNSTAEL
LLGSSVDLREVYRLFFGSFPLVPDDTWERDLWDGFGASEKMTRLEQSLPGGWRSLREGLV
HRALRDPAAAPRRPALLRLLSRALGLATPAPTSSDSPQALITEMEGVLFTGPMLEQLTCE
RSPVGLRRLLRVGPAQQPVLQAYRTLACNGSRAARHDRFTQLAAELREQLDTPRIVSRLK
LDEVNSTAAQHRLRALLEDLVEMEKVLRDVNILSALAKLLPRGACASKAPLPTANSTGWA
NANTTASNTTMEEEGAGGSPAGGDNPQGQFSAFVQLWAGLQPILCGNNRTIEPEALKQGN
MSSLGFTSKEQRNLGLLVHLMTSNPKILYAPVGTEVDKVILKANETFAFVGNVTHYAKAW
LNISPEIRAYLEEGRLQRRIRWLQQFTADLHKHPEILNVSDSDVLHNFLNGNFSLPNASV
LLQQLDTIDNAACGWVHFMAKVSVDIFKGFPDEESIVNYTLNQAYQDNVTVFASVIFQTN
RDGSLPPHVMYKIRQNSSFTEKTNEIRRAYWRPGPNTGGRFYFLYGFVWIQDMMERALIN
TFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVYSVAMMIQHIVTEKEH
RLKEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGKVLMHSDVLIIWLFLAIY
AVATIMFCFLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIREEVAHDKITAFEKCIASL
MSTTAFGLGSKYFALYEVAGVGIQWHTFSQSPVEGDDFNLLLSMMMLIVDAVVYGVLTWY
IEAVHPGMFGLPRPWYFPFQKSYWLGNGRVETWEWTWPWSRTTRLSIMEEDQACAMESRR
MAEETRGIEEEPTHLPLVVCIDKLTKVYKTDKKLALNKLSLNLYENQVVSFLGHNGAGKT
TTMSILTGLFPPTSGSATIYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSQL
KSMAEEEIRKEMDKMIEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAVILDEPTA
GVDPYARRAIWDLILKYKPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKST
YGDGYKLTVVKKQSDTRNGTEPAQLHSPPAHCSVSPCSEPRVSQFIKKYVASCLLISDTN
TELSYVLPSEAVKKGCFERLFQHLEQSLEELDLTSFGLMDTTLEEVFLKVSEEDQSLENS
DADMKESKKDTLQPPTTELGPKPEANGDVLAEAAVLEKPEVELSNLVTCSKLAQSQASLR
SASSVGSVRGDEGGAYSEFFGDYAPLFDNRQDPDNISLQEQEVEVEDHDLAGQGSFKLEG
SWLKLRQFHGLIVKRFHCAKRNTKALFSQILLPAFFVCVAMTVALSVPEIGDLPPLILSP
SQYHNYTQPKGNFIPYANEERREYRIRLSPDASPQQLVNTFHLPSGVGATCVLKTPFNNT
LDQPMQNLNSNESKMLAAKYFDAMCIDSFTQGLPLSNFVPPPPSPAPSDYPISVDEDLLR
AWNSTTFSSAVKETVTSAPALPHIVHEPIKCTCSMQGTGFSCPSGVGGHPPQMKVVTGDI
LADITGRNVSEYLLYTSDRFRLHRYGALTFGNVQKSIPASFGARAPATVRKIAVRRTAQV
FYNNKGYHSMPTYLNALNNAILRANLPKSKGNPAAYGITVTNHPMNKTSASLSLDYLLQG
TDVVIAIFIIVAMSFVPASFVVFLVAEKATKAKHLQFVSGCDPVIYWLANYVWDMLNYLV
PATCCIIILFVFDLPAYTSPTNFPAVLSLFLLYGWSITPIMYPASFWFEVPSSAYVFLIV
INLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLVFPNYNLGHGLMEMAYNEYINEY
YAKIGQFDKMKSPFEWDIVTRGLVAMTIEGFVGFFITIMCQYNFFRKPQRLPVSTKPIED
DIDVANERHRVLRGDADNDMLKIENLTKVYKSRKIGRILAVDRLCVGVRPGECFGLLGVN
GAGKTTTFKMLTGDESTTGGEAFINGHSILKELLQVQQSLGYCPQFDALFDELTAQEHLE
LYTRLRGIPWKDEERVVKWALKKLELTKYADKPASTYSGGNKRKLSTAIALIGYPAFIFL
DEPTTGMDPKARRFLWNLILDVIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLKCLGSI
QHLKNRFGDGYMITVRTKSSLNVKEVVRFFNRNFPEAVLKERHHTKAQYQLKSDQISLAQ
VFSKMEQVVDVLGIEDYSVSQTTLDNVFVNFAKKQSDNLEQQETSPSCTLQSPLERVLSL
LRPRAAPTELRALVVEEQEDLETDDEGLISFEEERAQLSFNTDTLC
NT seq
7521 nt
NT seq
+upstream
nt +downstream
nt
atggggttcctgcaccagctccatctcctgctctggaagaacgtgacgctgaagaggcgc
agcccgtgggtgctgacctttgagatcttcatccccctggtgctcttcttcatcctcctg
gggctgcggcagaagaagccaaccatccctgtgaaggaagtctctttctacacggcggcg
ccgctcacctcggccgggatcctgcccgtcatgcagtccctgtgccctgatggccagcgc
gacgagtttggcttcctgcagtattccaactccacggtgacgcagctcctggagcacctc
actgaagcagtggagcagagcagcctcttcgacccagagcacccggggctggaggaggag
ctggagtcactgcgcaggcacttggaggctctcagcagcagtgagcccagctccatggag
acccacttcagcaacacagcaggatccggcttcacgctggcatgggcagccaaggaccgg
ggcgagttgcaccgcttcctgacacagaacctgtccctgcccaacagcacagccgagctg
ctcctgggctccagcgttgacctgcgggaggtctatcgcctgttttttggttcctttcct
ttggtacccgatgacacctgggaacgagacctgtgggatgggtttggcgccagtgagaag
atgacgcggctagagcagagcctgccaggtggctggaggagcctgcgggaggggctggtg
cacagggcgctgcgggaccccgccgcagccccacgccgcccagcgctcctgcgcctgctc
tcccgggccctgggcctcgccacgccagcacccacctcctccgacagtccccaggccctc
atcaccgagatggagggtgtcctcttcacggggccaatgctggagcagctgacgtgcgag
cggagccctgtggggctgcggcgcctcctgcgtgtgggcccggcgcagcagccagtgctg
caggcgtaccgcaccctggcctgcaatggcagccgtgccgcccgccatgaccgcttcacc
cagctcgcggctgagctgcgggaacagctggacacccccaggattgtcagcaggctgaag
ctggatgaggtgaacagcacagccgcccagcaccgcctccgtgccctcctggaggacctg
gtggagatggagaaggttctccgtgatgtgaacatcctctcagcgctggccaagctgctg
cccagaggagcctgtgccagcaaggccccgctacccactgccaacagcaccggctgggcc
aacgccaacaccacggccagcaacaccacaatggaggaggagggtgccggggggagcccg
gctgggggtgacaaccctcaggggcagttctcagcatttgtgcagctctgggccgggctg
cagcccatcctctgcggcaacaaccggacgattgagcctgaggcgctgaagcagggcaac
atgagctcgctgggcttcaccagcaaggagcagcggaacttgggcctcctcgtgcacttg
atgaccagcaaccccaaaatcctgtatgcgcctgtgggcactgaagtggataaggtcatc
ctgaaggctaacgagacttttgcctttgtgggcaacgtcacccactatgctaaagcatgg
ctgaacatctcccccgagatccgtgcctacctggaggagggcaggctgcagaggcgcatc
cgctggctccagcagttcactgctgacctacacaagcacccagagatcctgaatgtctct
gatagtgatgttctccacaacttcctcaacggcaacttctccctgcccaacgccagtgtc
ctgctccagcagctggacactattgataacgctgcctgtggctgggtccacttcatggcc
aaggtcagcgtggacatcttcaaaggcttcccagatgaggagagcatcgtcaactacacg
ctgaaccaggcctaccaggacaacgtcacagtctttgccagtgtcatcttccagaccaac
agggatgggtcgctgcctccccacgtcatgtacaagatccggcagaactccagcttcaca
gagaagaccaacgagatccggcgggcatactggcgtcctggccccaacaccggcggccgc
ttctacttcctctacggcttcgtctggatccaggacatgatggagcgtgccctcatcaac
acgtttgttggccacgatgtggtggagcctggcaactatgtgcagatgttcccgtatcca
tgttacacccgggacgacttcctcttcgtcattgagcatatgatgcccttgtgcatggtg
atctcctgggtctactcagtggccatgatgatccagcacattgtgacagagaaggaacat
cgcctgaaagaggtgatgaagatgatgggtttgaacaatgcagtgcattgggtggcttgg
ttcattaccggcttcgtccagctctccatctcagtcacggcactcacggccatcctgaag
tatggcaaggtcctgatgcacagtgatgtcctcatcatctggctctttcttgccatctat
gcagtggccaccatcatgttctgcttcctggtatccgtgctctactccaaggccaagctg
gcctctgcctgtggcggcatcatctatttcctcagctatgtgccctacatgtatgtggcc
atccgggaggaggtggcacatgacaagatcacagcctttgagaagtgcattgcgtccctc
atgtccactacagccttcggactgggctccaagtactttgcactgtatgaggtggccggt
gtgggcatccagtggcacaccttcagccagtcacctgtggaaggagatgacttcaacctc
ctcctgtccatgatgatgctcatcgtggatgctgtggtgtatggcgtactcacatggtac
attgaggctgtgcacccaggtatgtttggcttgccgcggccctggtacttccccttccag
aagtcctactggctgggcaacgggcgagtggagacctgggagtggacatggccctggtcc
cgcaccacccgcctcagcatcatggaggaggatcaggcctgtgccatggagagccggagg
atggcagaggagacacgtggcatcgaggaggagcccacccacctccccttggttgtctgc
attgacaagctcaccaaggtctacaagacagacaagaagctggcgctgaacaagctgagc
ctcaacctctatgagaaccaggtggtgtccttcctggggcacaacggcgcagggaaaacc
accaccatgtccatcctcactggcttgttccctccgacctcgggctccgctaccatctac
ggccatgatatccgaacggagatggatgagatccggaagaacctgggcatgtgtccccag
cacaatgtgctgtttgacaggctgacagtggaagagcacctctggttctactcgcagctc
aagagcatggcagaggaggagatccgcaaagaaatggacaagatgattgaggacctggag
ctgtccaacaaacgccattccctggtgcagaccctctcagggggcatgaagaggaagctc
tcggtggccatagccttcgtgggtgggtcacgggccgtgatcttggacgagcccacggct
ggtgtggacccatatgcacgcagggccatctgggacctcatcctcaagtacaagccaggg
aggaccatcctgctctccacacaccacatggacgaggctgacctgctgggtgaccgcatc
gccatcatctcccatggcaagctcaagtgctgtggctctccgctcttccttaagagcacg
tatggtgatggctacaagctgacagtggtgaagaagcagtcggacaccagaaacggcaca
gagccagcccagctgcacagcccaccggcccactgctctgtcagcccctgctccgagcct
cgtgtctcccagttcatcaagaagtatgtggcctcctgcctcctcatctcagacaccaat
actgagctctcctatgtcctgcccagcgaggctgtcaagaaggggtgctttgagaggctc
ttccagcacttggaacagagcctggaggagctggacctcaccagttttgggctgatggac
accacactggaggaggtcttcctgaaggtgtctgaggaggaccagtctctggagaacagt
gatgcggacatgaaggagtccaagaaggacaccctgcagccacccaccactgagctgggc
ccaaagcccgaggccaacggagatgtcctggccgaagcagctgtgctggagaagcccgag
gtggagctcagtaacctggtgacatgctccaagctggcgcagtcacaggcgtccctgcgc
tcagcctcctcggtgggctctgtgcggggtgacgaaggtggggcttattctgagttcttt
ggggattacgcacccctgttcgataaccggcaggaccccgataacatcagtctgcaagag
caagaggtggaggtggaggaccatgacctggctgggcaggggagcttcaagctggagggc
tcctggctgaagctgcgccagttccatgggctgattgtcaaacgcttccactgcgccaag
cgcaacaccaaggccctcttctcgcagatcctcctgcccgccttcttcgtctgcgtggcc
atgacggtggcactctctgtgcctgaaataggtgacttgccacccctcatactctcgcca
tcgcagtaccacaactacacccagcccaagggcaacttcattccttatgccaacgaagag
cggcgtgagtaccgcatcagactgtctcctgacgccagcccccagcagctggtgaacacc
ttccacctgccctctggtgtgggggccacctgcgtgcttaagacacccttcaacaacacg
ctggaccagcccatgcagaacctcaacagcaatgagtccaagatgctggcggccaagtac
ttcgatgccatgtgcattgactccttcacccagggcctgccgctctccaacttcgtgccg
ccgcctccatccccggctccctctgactaccccatctcagtggatgaggacctgctccgt
gcctggaactccacgactttctcttccgccgtcaaagagacggtgacctcagctcctgcc
ttgccccacattgtccacgagcccatcaagtgcacgtgctccatgcaggggactggcttc
tcctgtcccagtggtgtggggggccacccgccacagatgaaggtggtgacaggggacatc
ctggcagacatcacagggcgcaacgtctctgagtatctgctctacacctcggaccgcttc
cggctgcacaggtacggggcactcaccttcggcaacgtccagaaatccatcccagcctcc
tttggggccagggctcctgccacggtgcgcaagattgctgtgcggaggacagcccaggtt
ttctacaacaacaagggctatcacagcatgcccacctacctcaacgctctcaacaacgcc
atcctgcgagccaacttgcctaagagcaaaggcaaccctgccgcctatggcatcacggtc
accaaccaccccatgaacaagacgagtgccagcctgtccctggattacctcctgcaaggt
accgatgtggtgatcgccatcttcatcatcgtggccatgtcctttgttccagccagcttt
gtggtgttcctggtggctgaaaaggccaccaaggccaaacatctgcagtttgtgagcggc
tgtgaccctgtcatctactggttggccaactacgtgtgggacatgctgaactacctggtg
ccggccacatgctgcatcatcatcctgtttgtgttcgacctcccggcatatacctctcct
accaacttccctgctgtcctctccctcttcctgctctacggctggtccatcacacccatc
atgtaccctgcctccttctggtttgaggtgcccagctctgcctacgtcttcctcattgtc
atcaacctcttcatcggcatcactgccactgttgccacgttcctgctgcagctctttgag
cacgacaaggatctgaaggtggtgaacagctacctgaagagttgcttccttgtattccct
aactacaacctgggtcatggcttgatggagatggcctataatgagtacatcaacgaatac
tatgccaagattgggcagttcgataaaatgaaatcgccctttgaatgggacatcgtgaca
cgggggctcgttgccatgacaatcgaaggctttgtcggcttcttcatcaccatcatgtgc
cagtacaacttcttccggaagccccagcggttgcccgtctccaccaaaccaatagaggat
gacatagacgtggccaacgagcggcaccgtgtcctgcgcggcgatgccgacaacgacatg
ctgaagatcgagaacctcaccaaggtgtacaagtcccgcaagatcgggcgcatcctggcc
gtggaccggctctgtgttggtgtgcggcccggggagtgcttcgggctgctgggtgtcaac
ggagcgggcaagaccaccaccttcaagatgttgacaggggacgagagcaccacgggtgga
gaggccttcattaatgggcacagcatcctgaaggagctcctgcaggtccagcagagcttg
ggctactgcccccagttcgatgcactcttcgatgagctgacagcccaggagcacctcgag
ctctacacccgcctgcgtggcattccctggaaggatgaggagcgggtggtcaagtgggcc
ctgaagaagctggagctgaccaagtacgcggacaaacctgccagcacctacagcgggggc
aacaagaggaagctatccacagctatcgcgctgatcggatacccggccttcatcttcctg
gacgaacccaccacggggatggaccccaaggcacggcgcttcctctggaacctcatcctg
gatgtcatcaaaacagggcgctccgtggtgctcacatctcacagcatggaggagtgcgag
gcgctctgcacccgcctggccatcatggtgaacgggcggctcaagtgtcttggcagcatc
cagcacctgaagaaccggtttggcgatggctacatgatcaccgtgcgcaccaagtccagc
ctcaacgtcaaggaggtggtgaggttcttcaaccgcaacttccctgaggctgtcctcaag
gagcggcaccacaccaaggcccagtaccagctgaagtcggaccagatctcgctggcgcag
gtcttcagcaagatggagcaggtggtggacgtgctgggcattgaagactattccgtcagc
cagaccacactggacaatgtatttgtgaattttgccaagaagcaaagtgacaacctggag
cagcaggagacgagcccaagctgcaccttgcagtcgcccctggagcgtgtgctgagcttg
ctgcgcccccgggctgcccccaccgagctgcgggccctcgtggtggaagagcaggaggac
ctggagaccgacgacgaaggcctcatcagcttcgaggaggagagggctcagctctccttc
aacacggacactctgtgctga
DBGET
integrated database retrieval system
