Strigops habroptila (Kakapo): 115617009
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Entry
115617009 CDS
T08851
Symbol
LAMC3
Name
(RefSeq) laminin subunit gamma-3 isoform X1
KO
K06247
laminin, gamma 3
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04510
Focal adhesion
shab04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115617009 (LAMC3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115617009 (LAMC3)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
Laminin_B
CdaS_N
Motif
Other DBs
NCBI-GeneID:
115617009
NCBI-ProteinID:
XP_030362855
LinkDB
All DBs
Position
15:complement(5134311..5153364)
Genome browser
AA seq
1578 aa
AA seq
DB search
MAQHPVLWLVALLWLVLGAGGSSSCWDPRGQPRRCMPVFENAAFGRAAQATNTCGSPPEE
YCLQMGARHASALCHRCDANDPQHHHNASFLTDFHSQEESTWWQSQSMAFGIQHPNSVNI
TLHLGKAYEITYVRLKFHTSRPESFAIYKRSRVDGPWVPFQYYSASCEKTYGKRQRLYLR
PGEDEQVAFCTDEFSDISPLSGGNVAFSTLEGRPSAYNFDGSPVLQEWVTVTDLLISLNR
LNTFGDDIFKDPKVLQSYYYAISDFSVGGRCKCNGHASECAPDEAGRLVCVCQHNTAGTD
CERCQPFHQDRPWARGTAEAANECLPCNCSGRSDECFYDRELFRRSGHGGHCRNCRDNTD
GPHCERCRPNHYRWEPQAACQPCHCHPAGSLQPQCDSSGTCLCKANVTGWKCERCKDGYH
SLSEGGCRPCACDPAGSVGSCDPNTGHCTCKERVEGHLCNRCQPGWFNLQPHNPAGCTSC
FCYGHSTACTAADGYEVAQVRSDFSQGLEGWAAAAPGTTDLPLHWADGEIITEWDGEEPV
DFLAPEKFLQNQRLSYGQLLSVLLGVEGMVIETGVPLLQVQLVLEGEGLEITMSSSESQP
QHGKQAVTFRLHEAEEGVEPSLSAFSFQRLLSNLTALRLRVNHVPGQGRLCLSEVQLTSA
RPGPGARAGWVEECSCPAGYTGQFCQSCAPGFKREIPFGGPFVSCVPCACNQHGDCHPLS
GHCQCLHNTEGPSCERCSPGFYGNPFIGRFDDCKPCPCPDSSPCTEVPSTGEVVCTHCPS
GQRGKRCELCDDGFFGDPLGQRGPAHPCVPCQCHENVDPNAVGNCDPVSGRCLRCLYNTT
GEHCESCRPGFYGDALAANPAGKCSSCDCNPDGSAPGLEGCDPSSGQCHCLPHVTGRTCG
LCQPGYYNLQPSVGCKSCQCHPMGSQDSGCHALTGQCSCQPGVTGKQCDRCQHGFFGFSA
RGCRACNCSPLGSVTPQCHENSTCLCRPGFVGYKCDRCQANFFPDPSSSRCQQCPACYGL
VKDEADQLKARLQEMEEWLQKPGCDARLGQSIMMRDAPRGDGLPSAHLLQGARAILLTQV
GRLAGALGTARGRLSNASQASGCSGHGHPKTCTLLLESGAALQSAQREILQAADTLATME
IPQEIPQQPTNWSHRALEARALAMSHEDAVVQVEVVVRRALRASNASSELLRSLLEGNAT
QDVQRELEAGYEEIQRARDELGADVAEVAAEARRAFTALQQGNADMAEKLLQVSAVGQQT
LLAQAGALEQDLAALEQEVEQQEPSALQAMEASRALAAGLRRELQRTRGFKQLQDQAGSA
HGTATSAISHGKAVLSDAESLLASVEGMRKVLGHRKGQAALHRRMALVRDRTMVEAQRKI
KQAEKTLGNSLSISTAARRTAGEAEQVAGESAKRARAVLQESKHARKRASQLAIRANETQ
RELSRQEHVAEKLRRDLEEAHQVETEVSEIAKSLQEARSSLIADIETLNDLLQSLGNLEP
AVPVDAVLSAGRLRLQRLRLRVAAPGALAGQLSLLQQEAARQQEKIQAVENDLAEIQADK
QNLEDILRSLPEGCLQWQ
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcatcccgtgctctggctggtggccctgctgtggctggtgcttggggcaggg
ggctcatcctcctgctgggacccccggggccagccccgccgctgcatgcccgtctttgag
aacgctgccttcggccgtgctgcccaggccaccaacacgtgtggttcacccccggaggaa
tactgcctgcagatgggtgcccgccacgccagcgccctgtgccaccgctgcgatgccaat
gacccccagcaccaccacaacgcctccttcctcaccgacttccacagccaggaggagagc
acctggtggcaaagccagtccatggcctttggcatccagcaccccaactccgtcaacatc
accctccacctgggcaaagcctatgagatcacctacgtgcggctgaagtttcacaccagc
cgccccgagagttttgccatctacaagcgcagccgcgtcgacgggccctgggtgcccttc
cagtactacagtgcatcctgtgagaagacctatgggaagcggcagcggctctacctgcgc
cccggggaggatgagcaggtcgccttctgcaccgatgagttcagtgacatctccccgctc
agtgggggcaacgtggccttctccaccctggaaggacggcccagcgcatacaacttcgat
ggaagccccgtgctgcaggagtgggtgaccgtcactgacctgctcatctccttgaaccgg
ctcaacacatttggggatgacatcttcaaggaccccaaggtgctgcagtcatactactat
gccatctctgacttctccgttggtggcaggtgcaaatgcaatggtcacgccagcgagtgc
gccccggacgaggccgggcggctggtctgtgtgtgccagcacaacacagccggcaccgac
tgcgagcgctgccagcccttccaccaggaccggccctgggcccgcggcaccgccgaggct
gccaacgagtgtctgccttgcaactgcagcggccgctcggacgagtgcttctacgaccgg
gagctgttccgccgcagcgggcacggggggcactgccgcaactgccgcgacaacacggat
gggccccactgtgagcgctgccgacccaaccactaccgctgggagccgcaggcagcctgc
cagccctgccactgccaccccgcgggctccctgcagccgcagtgtgacagctcggggacc
tgcctctgcaaagccaatgtgacggggtggaagtgtgagcgctgcaaggatggataccac
agtctcagtgaaggtggctgcagaccctgtgcctgtgacccagcaggcagcgtgggctcc
tgtgaccccaacacggggcattgcacttgcaaggagagggtggagggacacttgtgcaac
aggtgccagccaggctggttcaacctgcagccccacaaccctgccggctgcaccagctgc
ttctgctatggccactccactgcctgcacggcagcagatggctacgaggtggctcaggtc
cgctctgacttcagccaagggctggagggctgggctgctgcagctccgggtaccacagac
ctgccgctgcactgggctgatggggagatcatcactgagtgggatggagaggagcccgtg
gattttcttgcaccagagaagtttctgcagaaccagcgtctcagttacgggcagctcctg
tccgtgctgctgggagtggaggggatggtgattgagactggggtgcccctgctccaggtc
cagctcgtgctggagggcgaggggctggagatcaccatgtccagcagtgagagccagccc
cagcacggaaagcaggctgtcaccttcaggctgcacgaggcagaggagggtgtggagcct
tcactgtcggccttcagcttccagcgcctgctctccaacctgaccgccctccgccttcgt
gtgaaccacgtccctgggcaaggcaggctgtgcctgagcgaggtccagctcacatccgcg
cgccccgggccaggagcaagggcaggctgggtggaggagtgctcgtgtcctgcgggatac
accggccagttctgccagtcctgcgcacccggcttcaaacgcgagatccccttcggtggt
cccttcgtcagctgcgtgccctgcgcctgcaaccagcacggggactgtcacccactttca
gggcactgccagtgcttgcacaacacagaaggtccctcctgcgagcgctgcagccctggg
ttttacggcaaccccttcatagggcgttttgatgactgcaaaccatgcccctgccccgac
agctcgccctgcactgaggtgcccagcaccggggaggttgtctgcacccactgcccgtcg
gggcagagaggaaaacgctgtgagctctgtgatgatggattttttggggaccccctgggg
cagaggggacctgcgcatccctgtgttccctgccagtgccatgagaatgtggatcccaac
gctgtggggaactgcgaccccgtgtccggccggtgcctgcgctgcctgtacaacacgacg
ggcgagcactgtgagagctgtcggccgggcttctacggggatgcgctggctgcaaatcct
gctgggaagtgctcatcttgtgattgcaaccctgatggctcagccccagggctggagggc
tgtgatcccagctcaggccagtgccactgcctcccgcacgtgacaggcagaacctgtggg
ctctgccagcccggctactacaatctgcagccctctgtggggtgcaagagctgccagtgc
cacccgatggggtcgcaggacagcggatgccatgcgctgacagggcagtgctcctgccag
ccgggtgtcacagggaagcaatgcgaccggtgccagcacggcttcttcggcttctctgcc
aggggctgccgagcctgcaactgctcgccgctgggctccgtcacgccgcagtgccatgag
aacagcacgtgtctgtgccgccccggctttgtgggctacaagtgtgaccggtgccaggcc
aacttcttccccgacccatcgagctcccgctgccagcagtgtcctgcctgctacgggctg
gtgaaggatgaggcagaccagctgaaggccaggctgcaggagatggaggaatggctgcaa
aaaccaggctgtgatgcacgcctgggccagtccatcatgatgagagatgcgccccgggga
gatgggctgcccagtgctcacctcctgcaaggtgcccgggccatcctcttgacgcaggta
gggaggctggcaggggcgctgggcaccgcgcggggccgtctcagcaacgccagccaagcc
agtggctgctccgggcacggacaccccaagacctgcaccctgctcttggagagcggggcc
gcgctgcagtcggcacagcgggagatcctgcaggctgcggacaccctggctaccatggag
attccccaggaaatccctcagcagcccacaaactggagccaccgggcgctggaggcgcgg
gcactggccatgagccatgaggacgccgtggtccaggtggaggtggtggtcaggagagcg
ctgcgtgcctccaacgccagctccgagctcctgcggagcctgctggaggggaatgcgaca
caggatgtgcagcgtgagctggaggccgggtatgaggaaatccagcgggcacgggatgag
ctgggtgctgatgtggctgaggtggcagcagaggccaggagagctttcacagccctgcag
caggggaatgcagacatggctgagaagcttctgcaggtgtctgcagtgggacagcagaca
ctgctggctcaggctggagccctagaacaggacctggcagcgctggagcaggaagtggag
cagcaggagccatcggctctgcaggccatggaggcatcccgtgctctggctgccggattg
cgccgggagctgcagaggactcgtggcttcaagcagcttcaggaccaggctggctctgcc
catggcacagccacctcggccatctcacatggaaaagccgtgctctccgatgcagagtcc
ctcctggccagcgtggaaggcatgaggaaggtgctgggtcatcggaaaggccaggctgcc
ctgcacaggcggatggcacttgtgcgggacaggacaatggtggaggcccagaggaagatt
aaacaggcagagaagacactgggaaactccttatccatctccaccgcagcccggaggaca
gccggggaggctgagcaagtcgctggggagagcgccaagagggcacgggctgtgctgcag
gagagcaagcatgcccgcaagcgtgccagccagcttgctatacgtgccaatgagacccag
cgggagctctcccggcaggagcatgtggctgagaagctcaggagggacctggaggaagca
catcaggtggagacagaggtgagtgagatagcaaaaagtctccaagaagcgcggagctcg
ctcatcgccgacatcgagaccctgaatgacctgctgcagagcctaggcaacctggagccg
gccgtgccggtggacgcggtgctgagcgccgggcggctgcggctgcagcggctgcggctg
cgtgtggctgcaccgggtgccctggctgggcagctcagcctgctgcagcaggaggctgca
cggcagcaagagaagatccaggcggtggagaacgacctggctgagatccaggccgacaag
cagaacctggaggacatcctgcggagcctccccgagggctgcttgcagtggcagtga
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