Strigops habroptila (Kakapo): 115617070
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Entry
115617070 CDS
T08851
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1 isoform X1
KO
K02599
Notch 1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115617070 (NOTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
Ank_4
EGF_3
cEGF
Motif
Other DBs
NCBI-GeneID:
115617070
NCBI-ProteinID:
XP_030363002
LinkDB
All DBs
Position
15:1239780..1282720
Genome browser
AA seq
2552 aa
AA seq
DB search
MERLLAPGLLVLLLPALTRGLRCTQLAESCLNGGKCETFLNGTEVCQCGGAFVGERCQLP
NPCLSSPCKNAGTCTAVVRGSTVDYTCACRLGFTDELCLTPRDNACLSNPCRNGGTCDLL
TLSEYKCRCPPGWSGKTCQQADPCASNPCANGGQCVPFEAHYICRCTTGFHGANCKQDVN
ECNISPPICKNGGSCTNEVGTYQCSCKPAFTGQNCEHLYVPCNPSPCQNGGTCRQIGDTT
YDCTCLPGFTGQNCEENINDCPGNNCKNGGTCVDGVNTYNCQCPPEWTGQYCTEDVDECQ
LMPNACQNGGTCHNNHGGYNCVCVNGWTGEDCSENIDDCAMAACFHGATCHDRVASFYCE
CPHGRTGLLCHLDDACISNPCNEGSNCDTNPVNGKAICTCPSGYMGPACNQDVDECSLGA
NPCEHAGKCINTQGSFQCQCLQGYSGPRCEIDVNECLSNPCQNDATCLDQIGEFQCICMP
GYEGVYCEINTDECASSPCLHNGNCLDKINEFHCECPTGFNGHLCQFDIDECASTPCKNG
AKCVDGPNTYSCECTEGFSGAHCEIDIDECDPDPCHYGTCKDSIASFTCLCQPGYTGHRC
DININECQSQPCKNGGTCQDRNNAYNCLCLKGTTGPNCEINLDDCASSPCDYGKCIDKIN
GYECTCELGYTGRMCNINIDECASNPCHNGGTCKDGINGFTCLCPEGFHDPKCLSEVNEC
NSNPCIHGKCHDGLNGYRCDCDPGWSGTNCDINNNECESNPCMNGGTCRDMTSGYICTCR
EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYTCNCLLPYTGATCEDVLAPCAGSPCKN
GGECQESEDYKSFSCSCPPGWQGQTCEIDINECVKSPCRNGATCQNTNGSYRCACRTGFT
GRNCDTDIDDCKSNPCRNGGSCSDGIGTFFCECLAGFRGPKCEEDINECASNPCKNGANC
TDCVNSYTCTCPSGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCVCLPGFTGSYCEH
DINECDSKPCLNGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTNNL
YRCECNSGWTGLYCDVPSVSCEVAAKQQGIDVAHLCRNSGLCVDTGNTHFCRCQAGYTGS
YCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGGTCID
LINTYKCSCPRGTQGVHCEINVDDCSPFFDPVTLGPKCFNNGKCTDRVGGYSCICPPGFV
GERCEGDVNECLSNPCDARGTQNCVQRVNDYKCECRPGYAGRRCDTVVDGCKGKPCRNGG
TCAVASNTGRGFICKCPPGFVGATCENDSRTCGNLHCLNGGTCISIHKSSKCMCAPAFTG
PECQYPASSPCTSNPCYNGGTCEFFSDASPYYRCNCPANFNGLNCHILDFDFQGGIGQDI
IPPKIEEKCEIAVCAGYAGNKICDGKCNNHACGWDGGDCSLNFNDPWKNCSQSLQCWKYF
NDGKCDSQCNNAGCLYDGFDCQKYEGQCNPLYDQYCKDHFSDGHCDQGCNNFECEWDGLD
CANNMPEKLADGTLVVVVLITPENLKNNSFNFLRELSRVLHTNVVFKKNPKGEYMIFPYY
GNEEELKKHYIKRSTEDWSDMSSAVINKVKSSLYSRAGRRQKRELDQMDIRGSIVYLEID
NRQCIQSSSQCFQSATDVAAFLGALASLGNLNIPYKIEAVKSETAEPTKNSQLYPMYVVV
VAVLVLLAFIGVGVLVSRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGLKPLKNA
SDGTLMDDNQNEWGDEETLDTKKFRFEEQAMLPDTDDQTDHRQWTQQHLDAADLRISSMA
PTPPQGEIDADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEDDAPAVISDFIYQGAS
LHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQI
LIRNRATDLDARMHDGTTPLILAARLAVEGMLDDLINCHADVNAVDDLGKSALHWAAAVN
NVEAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRD
IAQERMHHDIVRLLDEYNLVRSPPLHNGPLGAPTLSPPLCSPNSYISNLKPAVQGKKARK
PSTKGLSCNGKDAKDLKARRKKSQDGKGCLLDNSSVLSPVDSLESPHGYLSDVASPPLMT
SPFQQSPSMPLNHLPGMPDAHMSINHLNMAGKQDMAMGSSSRMGFDAVPPRLSHLPVSSP
STVMSNAPMSFSVGGASGLNGQCDWLTRLQNGMVQNQYNPMRGNMQPGAHQQTQNLQHGM
MTSLHNGLPTTSLSQMMSYQAMPNTRLASQPHLMQSQQLQQMQQQQLQQQNLQPQQQAQQ
QAQQQQAPQPPPQQHHNPSSSASGHIGQNFLGTELSQPDMQPVSSSTMAVHTILPQDSQM
LPTSLPSSLAQPMTTTQFLTPPSQHSYSSPLDNTPSHQLQVPDHPFLTPSPESPDQWSSS
SPHSNVSDWSEGISSPPTSMQSQMGHIPEAFK
NT seq
7659 nt
NT seq
+upstream
nt +downstream
nt
atggagcggctcctggcgcccgggctcctggtgctcctgctgcccgccctgacgcgaggt
ttacggtgcacgcagcttgctgaatcctgcctcaatgggggcaagtgtgaaactttcctc
aacgggacggaggtgtgccagtgcggcggtgccttcgttggcgagcggtgccaactgccc
aacccctgcctgagctccccgtgcaagaacgccggcacctgcaccgcggtggtgcgcggc
agcaccgtggactacacgtgcgcctgccgcctgggcttcaccgacgagctgtgcctgacg
ccccgcgacaacgcctgcctcagcaacccctgccgcaacggcggcacctgcgacctgctc
acgctcagcgagtacaagtgccgctgcccgccggggtggtcaggcaaaacctgccagcag
gctgatccctgtgcctccaacccctgcgccaacgggggccagtgcgtccccttcgaagcc
cactacatctgccggtgcaccaccggcttccacggcgccaactgcaagcaggacgtgaac
gaatgcaacatctctccccccatctgcaagaacggcgggagctgcaccaacgaggtgggc
acgtaccagtgctcctgcaagccggcgttcaccgggcagaactgcgagcacctctacgtg
ccctgcaacccctcgccctgccagaacgggggcacgtgccgccagatcggggacacgacc
tacgactgcacgtgcctgccagggttcacgggccagaactgtgaggagaacatcaatgac
tgtccaggcaacaactgcaagaatgggggtacctgcgtggatggtgtcaacacctacaac
tgccagtgcccgcccgagtggacaggtcagtactgcactgaggacgtggacgagtgccag
ttgatgcccaatgcctgccagaacgggggcacttgccacaacaaccatggtggctacaac
tgcgtgtgtgtcaatggctggacgggcgaggactgcagcgagaacatcgatgactgtgcc
atggccgcctgcttccacggggccacgtgccatgaccgtgtcgcctccttctactgcgag
tgcccccacggccgcacaggtttgctgtgccacctcgatgatgcctgcatcagcaacccc
tgcaacgagggctccaactgtgacaccaaccccgtcaatggcaaagctatctgcacatgt
ccttcggggtacatggggccggcctgcaaccaggacgtggacgagtgctcgctgggagcc
aacccttgtgagcacgcagggaagtgcatcaacacccaggggtccttccagtgccagtgc
ctgcagggctactcgggccctcgctgtgagatcgatgtcaatgagtgcctctccaacccc
tgccagaacgatgccacctgcctggaccagatcggggagttccagtgcatctgcatgccc
ggttacgagggggtttactgtgagatcaacacggacgagtgcgccagcagcccctgtctg
cacaacggcaactgcctcgacaagatcaatgagttccactgcgagtgccccactggcttc
aacgggcacctctgccagttcgacatcgacgagtgcgccagcaccccctgcaagaacggc
gccaagtgcgtggatggccccaacacctacagctgcgagtgcaccgaaggtttctcaggc
gctcactgcgagattgacattgatgagtgcgaccccgacccgtgccactacgggacctgc
aaggacagcatcgcctccttcacctgcctctgccagcccggctacacgggccaccgctgc
gacatcaacatcaacgagtgccagagccagccctgcaaaaacgggggcacctgccaggac
aggaacaatgcctacaactgcctctgcctcaaagggaccacggggcccaactgtgagatc
aacctggatgactgcgccagcagcccctgcgactatggcaagtgcatcgacaagatcaac
ggctacgagtgcacctgcgagctggggtacacagggcgcatgtgcaacatcaacatcgat
gagtgtgccagcaacccctgccacaacgggggcacgtgcaaggatggcatcaacggcttc
acctgcctctgccccgagggcttccatgaccccaagtgcctgtccgaagtgaatgagtgc
aacagcaacccctgcatccatgggaaatgccacgacgggctgaacggctacaggtgtgac
tgtgacccaggctggagcgggacgaactgcgacatcaacaataacgagtgtgaatccaac
ccctgcatgaacggtggcacctgcagggacatgaccagcggctacatctgcacatgcagg
gagggcttcagcggacccaactgccagaccaatatcaatgaatgtgcctccaacccttgc
ctgaaccagggcacgtgcatcgacgacgtcgccggctacacttgcaactgcctcctgccc
tacacaggagccacctgtgaggacgtgctggccccctgcgctggcagcccctgcaagaac
ggcggcgagtgccaggagtcagaggactacaagagcttctcctgcagttgcccccctggc
tggcaaggtcagacctgcgagatcgacatcaacgagtgcgtgaagagcccctgccgcaac
ggggccacgtgccagaacaccaacgggagctaccgctgcgcctgcaggaccggcttcact
ggccgcaactgcgacactgacatcgacgactgcaagtccaatccatgccgcaacggtggc
tcctgctccgatggcatcggcacgttcttctgcgagtgcctggctggtttccgtgggccc
aagtgtgaggaggacatcaacgagtgcgccagcaacccctgcaagaacggtgccaactgc
accgactgtgtcaacagctacacctgcacgtgtccctccggcttcagcggcatccactgc
gagaacaacactcctgactgcacagagagctcctgcttcaatggcgggacctgcgtggat
ggcatcaacaccttcacctgcgtgtgtctgcccggcttcacgggcagctactgcgagcat
gacatcaatgagtgtgactccaagccgtgcctgaacgggggcacgtgccaggacagctac
gggacatacaagtgcacttgtccccagggatacaccggactcaactgccagaacctggtg
cgttggtgcgactcctctccctgcaaaaatgggggcaaatgctggcagaccaacaacttg
taccgctgcgagtgcaacagcgggtggacagggctctactgcgacgtccccagcgtctcc
tgcgaggtggctgctaagcagcaaggtatcgatgtagcgcatctctgcaggaactcaggg
ctctgcgtggacaccggcaacactcacttctgccgctgtcaggccggctacaccggcagc
tactgcgaggagcaggtcgatgagtgctcccccaacccctgccagaacggagccacctgc
acagactacctgggaggctactcctgcgagtgtgtggccggttatcatggagttaactgc
tcagaggagatcaatgagtgcttgtcccacccatgccagaatggaggaacctgcatcgat
ctcatcaatacctacaaatgctcctgccccagaggaactcaaggggtgcactgtgagatc
aatgtggatgactgcagccctttctttgatcctgtcaccctggggcccaagtgctttaac
aatggcaagtgcacggatcgggtaggtggctacagctgcatctgcccccctggctttgta
ggggagcgctgcgagggagatgtcaacgagtgcctgtccaacccctgcgacgcccgcggc
acccagaactgcgtgcagcgggtcaatgactacaaatgcgagtgccggcccggctacgca
ggccgtcgctgtgacactgtggtggatggttgtaaaggcaaaccctgcaggaatggtgga
acgtgcgcggttgccagcaacaccggccgtggcttcatctgcaagtgccccccgggattc
gtgggtgccacttgcgagaacgactcccgcacgtgtgggaacctgcactgcctgaacggc
ggcacctgcatctccatccacaagagctccaagtgcatgtgtgcgccggccttcacgggc
cccgagtgccagtacccggccagcagcccctgcacgtccaacccctgctacaacggcggc
acctgcgagttcttcagcgatgcctccccctactaccgctgcaactgccccgccaacttc
aacggcctcaactgccacatcctcgacttcgatttccaaggcgggattgggcaggacatc
atcccacccaaaattgaggagaagtgtgagatcgccgtgtgcgcggggtatgccggcaac
aagatctgcgatgggaaatgcaacaaccatgcgtgtggctgggatgggggcgactgctcc
ctcaacttcaacgacccctggaagaactgctcccagtccctgcagtgctggaagtacttc
aacgatggcaagtgtgactcccagtgcaataacgctggctgcctgtacgatggattcgac
tgccagaaatacgaagggcagtgcaaccctctgtatgatcagtactgcaaagatcacttc
tcagatggtcactgtgaccagggctgcaataactttgagtgtgaatgggatggtttggac
tgtgcaaacaacatgccagagaagcttgccgatggcacgctggtggtggtggtcctcatc
actcctgagaacctgaagaacaactctttcaacttcctgcgggagctgagccgcgtcctg
cacaccaacgtggtcttcaagaagaaccccaagggagagtatatgatctttccatactat
ggcaatgaggaggagctgaaaaagcattacatcaagaggtcaacagaggactggtcagat
atgtctagtgctgtcatcaacaaagtaaagagcagcctgtactccagggctggccgaagg
cagaagagagagctcgatcagatggacatcagaggatccatcgtctacttggaaatcgat
aaccgccagtgcatccagtcatcttcccagtgcttccagagtgccaccgatgtggcggca
ttcctgggagccttggcctcccttggcaacctgaacataccctacaaaatagaagctgtt
aaaagtgaaacagccgagcccacaaagaactcccagctgtatcctatgtacgtggtggtg
gtggctgtgctggtcttgcttgctttcatcggagtgggagtactggtgtcccgtaagcgg
cgcagggagcatgggcagctctggttccctgaaggcttcaaagtgacagagtcaagcaag
aagaagcgacgagaaccacttggggaggattctgttggactgaagcccctcaaaaatgct
tcagatggcacactgatggatgacaaccaaaatgagtggggtgatgaggagaccttggac
accaagaagttcaggtttgaggagcaggcaatgctgcccgacacggacgaccagacggat
cacaggcagtggacccagcagcacctggatgccgcagacctgcgcatatcctccatggca
cctactccgccgcagggggagatcgatgcggactgcatggacgtcaacgtcagaggtcct
gatggcttcaccccactcatgatcgcctcatgcagcggaggagggctcgagacgggcaat
agtgaagaggaggacgatgctcccgccgtgatctcagacttcatttaccaaggcgccagc
ttgcacaaccagactgaccgcaccggcgagacggcgcttcacctggctgcccggtactcc
cgctcggacgctgccaagcgcctgctggaagccagcgccgatgcaaacatccaggataac
atgggcaggacgcccctgcacgccgccgtctctgccgatgcccagggagtcttccagatc
ctgataaggaacagggcaacagatctcgatgcccgaatgcatgacgggaccactcctctg
atcctggctgctcgcttggctgtggagggcatgctggatgatctcatcaactgccatgca
gacgtcaatgccgtggatgatctaggcaagtcagcactgcactgggcagctgctgtgaat
aatgttgaagctgcagtagtcctcctgaagaatggtgctaataaggatatgcagaacaat
aaggaggagaccccactgttcctcgcagccagagaagggagctacgaaaccgccaaggtc
ctgctggaccattttgccaaccgggacatcacggaccacatggaccggctcccacgggac
atcgcgcaggagcgcatgcaccacgacatcgtgaggctgctggatgagtacaacctggtg
cggagcccaccgctgcacaacggcccgctgggagcacccacgctgtccccaccgctctgc
tcccccaacagctacatcagcaacctgaagcctgccgtgcagggcaagaaagccaggaag
ccgagtaccaagggcctgagctgcaatggcaaggatgccaaagacctcaaagcccggagg
aaaaagtcacaagatggaaaaggatgtctgcttgacaactccagtgtgttgtctccagtg
gactccctggagtcgccccatgggtacctgtcggatgtcgcctctcctccgctgatgacc
tccccgtttcagcagtccccttccatgcctctgaaccatctgccaggcatgcctgatgcc
cacatgagcatcaatcacctcaacatggcggggaagcaggatatggccatgggaagctcc
agcaggatgggcttcgatgcggtgccaccgcgcctctcccacctcccggtctccagcccc
agcaccgtgatgagcaatgccccgatgagtttctctgttggcggggcgtccgggctgaac
gggcagtgtgactggctcaccaggctgcagaacggcatggtccagaaccagtacaacccc
atgagaggcaacatgcaacccggggcgcatcagcagacgcagaaccttcagcacggcatg
atgacctccctgcacaacggcttgcccaccacgagcttgtcgcagatgatgagctaccag
gccatgcccaacacccggctggcttcccagcctcacctgatgcagagccagcagctccag
cagatgcagcagcaacagctccagcagcaaaacctgcagccgcagcagcaggcgcagcag
caggcgcagcagcagcaggcgccgcagccgccgccgcagcagcaccacaaccccagctcc
agcgcgagtggccacatcggccagaatttcctcggtacggagctgagccagcccgacatg
cagccggtgagcagcagcaccatggcggtgcacaccatcctgccgcaggattcccagatg
ctgcccacgtctctgccgtcctccctcgcccagcccatgaccaccacgcagtttctaact
ccaccttcccagcacagttattcctcccccttggacaacacccccagccaccagctccag
gtgcccgaccaccctttcctaacgccgtctccggagtctccggaccagtggtccagctcg
tctcctcactccaacgtgtccgactggtccgagggcatctccagccctcccacaagtatg
cagtcacagatgggacacatccccgaagccttcaagtga
DBGET
integrated database retrieval system
