Strigops habroptila (Kakapo): 115617074
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Entry
115617074 CDS
T08851
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04010
MAPK signaling pathway
shab04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115617074 (CACNA1B)
04020 Calcium signaling pathway
115617074 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shab04040
]
115617074 (CACNA1B)
Ion channels [BR:
shab04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115617074 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
DUF4587
Motif
Other DBs
NCBI-GeneID:
115617074
NCBI-ProteinID:
XP_030363010
LinkDB
All DBs
Position
15:complement(9433192..9743685)
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AA seq
2368 aa
AA seq
DB search
MARFGDDLPTRYGGGGPAGAGRGSSRQGGPQAGQRMYKQSMAQRARTMALYNPIPVKQNC
FTVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGK
FHKTCFSNETGDEVGDFPCGEEPPARQCESGTTCREYWQGPNYGITNFDNILFAVLTVFQ
CITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENR
RAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDGRAASEGPIQQGTAP
AETSSGSSYNMLKRAAIKKSKNDLIHAEEGEDHFTDICSVGSPFARASLKSGKNESSSYF
RRKEKMFRFFIRRMVKAQSFYWVVLCVVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGL
FLTEMSLKMYGLGPRNYFHSSFNCFDFGVIVGSIFEVIWAAVKPGTSFGISVLRALRLLR
IFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTT
NFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVRAGMFSSIYFIVLTLFGNYTLLNVF
LAIAVDNLANAQELTKDEEEMEEATNQKLALQKAKEVAEVSPMSAANISIAAFVKQTRGT
VSRSSSVSSVNSPKQQNSSKSKSVWEQRTSQIRMHNFRASCEALYNELDPEERVRYATTL
HIRPDMKTHLDRPLVVEPRSEGRNNISKLSPVDVQEVEQTKVSSSDGAEAPRKHHRHRDK
DKLGEQEKGDVTKDDNGESGVNNKEERHRQHRSRSKEVEGGSKEGKSDRNRGPEGGKRHH
RRGSVEEGGEKEHRRHRPHRHSAERQGKEGNGTINGARSERRSRHRGGSRSGNREGEPGS
KGENGEEPHRRHRFRNRALSTYDSVEKENGEKEGEAGEKEHRNHQPKENKCEIEASGSVS
VPVHTLPSTYLQKVPEQPEDADNQKNVTRMIQPPLDKTTTVNIPVTITAPPGETTVIPMN
NVEFESKTEEKKDVDDLTKNGPKPILPYSSMFILSPTNPIRRLFHYIVNLRYFEMVILIV
IALSSIALAAEDPVQAESPRNDALKYLDYIFTGVFTFEMVIKMIDLGLLLHPGSYFRDLW
NILDFIVVSGALVAFAFSSFMGGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCV
VNSLKNVLNILIVYMLFMFIFAVIAVQLFKGRFFYCTDESKELEKDCRGQYLDYEKNEVE
AQPREWKKYEFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYEEQGPSPGYRMEMSIF
YVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRYMPQ
NKQSFQYKMWKFVVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIVFTSMFS
MECVLKIIAFDVLNYFRDAWNVFDFVTVLGSITDILVTEIADTDNFINLSFLRLFRAARL
IKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDDETSINRH
NNFRTFLQALMLLFRSATGEAWHEIMLSCLSNRACDPLSGLTKNECGSDFAYFYFVSFIF
LCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDPAACGRISYTDMYEML
RHMSPPLGLGKKCPARVAYKRLVRMNMPISPEDLTVHFTSTLMALIRTALEIKLASGGVK
QHQCDAELRKEISLVWPNLSQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKNSREQ
VHQPPGGLCQPGPVSLFHPLKATLEQTQPAAFSNAKAFLRQKSSASLNNGGALPAPEGGI
KESSSWGTQRTQDVFYETRTPAFERGHSEEIPIERVVEMREISPTLANGEHQPGLESQGR
AASMPRLAAETQPIPDTSPMKRSVSTLTPQRPHPMHLYEYSLERMPPEQVHHHHHHRCHR
RKEKKQKSLDRSPHQLADGQAVAQSAESSSKDKKQERGRSQERKQHSSSSSEKQRFYSCD
RYGSRDRSQPKSTDQSRPTSPNGGPEQGPHRQGSGSVNGSPLLSTSGASTPCRGRRQLPQ
TPLTPRPSITYKTANSSPVHFTTFQPVLPTFSPGRLSRGLSEHNALLRGDQQPPVVARIG
SDPYLGHRDDADSPYHAVPEDTLTFEEAVATNSGRSSRTSYVSSLTSQSHQIRRVPNGYH
YTLGLNTGPGTGTRGRSYYHEADEDDWC
NT seq
7107 nt
NT seq
+upstream
nt +downstream
nt
atggctcggttcggggatgatctgccaacccgctatggaggcggagggccggccggcgct
ggaagagggagcagccggcaaggtggcccccaagccggccaaaggatgtataagcagtcg
atggctcagagggccaggactatggctctctacaaccccatccctgtcaaacagaactgc
ttcacagtcaacagatccctcttcatcttcagtgaagataatgttatacggaaatatgcc
aagagaataacagaatggcctccatttgaatacatgattttagctacaatcatagccaac
tgtattgtgctggctctggaacaacatttgccggatggagacaagacacctatgtcagag
agattggatgacactgagccatactttattggaatattttgttttgaagctggtataaaa
atcatcgctctggggtttgtttttcataaaggctcttacctccgaaatggttggaacgtg
atggattttgttgtggtcctcacaggtattctagcaactgctgggactgattttgacctg
cggaccctgcgagccgtccgagtgttgcgacccctgaagcttgtgtctggaattccaagc
ttgcaggttgtcctcaagtccatcatgaaggcgatggtgcccttgcttcagatcgggctg
ctcctcttctttgccattgtgatgtttgccatcatcgggctggagttttacatggggaag
ttccataaaacctgcttctctaacgagacgggtgatgaggtgggagatttcccttgtgga
gaggagccacctgccaggcagtgtgagagtgggaccacctgcagggagtactggcaaggg
cccaactacggcatcaccaactttgacaatatcctcttcgctgtgctcactgtcttccag
tgcatcaccatggagggatggaccgacatcctttacaatacaaacgatgctgcaggaaat
acctggaactggctttacttcatccctctcatcatcattggctctttcttcatgctcaac
ttggtgctgggcgtcttatcaggtgaatttgccaaagaacgagagagggtagaaaatcgt
cgagctttcctgaaactccgcaggcagcagcaaattgaacgggaactgaatggatacttg
gagtggatcttcaaagcagaggaggtcatgctggcagaggaagacaagaatgcagaagag
aaatctcctctggatgggagggccgcctcggaagggccgattcaacaaggcaccgcaccg
gcagagactagcagcggcagcagctacaacatgttgaaaagagctgcaataaagaagagc
aaaaatgacctgattcatgctgaagaaggtgaggaccatttcacagacatttgctccgtt
gggtctccttttgcccgtgccagtttgaagagtggcaagaacgagagctcatcctacttc
aggaggaaagagaagatgttccggttcttcatccgacgcatggtgaaagctcagagcttc
tactgggtcgtcctctgcgtggtcgccctcaacacactctgcgttgcgatggtgcactat
gaccagccagagaagctcaccactgctctgtattttgcagagtttgtttttctgggtctg
ttccttactgagatgtctttgaagatgtatggactggggccaaggaattacttccactct
tcattcaactgctttgactttggggtcatcgtgggaagtatatttgaagtcatttgggct
gcagtgaaaccaggtacctcatttggcatcagtgtcctgagagcacttcgactgctgagg
atattcaaagtaacaaagtactggaattccctgaggaacctggtggtctccttgctgaac
tccatgaagtccatcatcagtttgctcttcctgcttttcctcttcattgtggtgtttgct
ttgctggggatgcagctcttcggaggacaattcaatttccaagatgaaacaccaaccacg
aattttgataccttccctgccgccatcctcacagtattccagatcctgacaggggaagac
tggaatgctgtgatgtaccatggaatagagtcacagggcggcgtccgcgcaggaatgttc
tcctccatctacttcatcgtcctgacgttgtttggtaactatacgctcctgaacgtcttc
ttggctattgctgtggacaatctggcaaatgcccaagagctgaccaaggatgaggaggag
atggaggaagccaccaatcaaaagctcgccctgcaaaaggccaaagaggtggcagaagtc
agccccatgtctgcagccaacatctccatagctgcttttgtaaagcaaactcgaggtact
gtatctcgcagctcgtcagtctccagcgtaaattcacccaagcagcagaactcctccaaa
tccaaatctgtttgggagcagaggaccagccagatccggatgcacaatttccgagccagc
tgcgaggcactgtacaatgagctggatccagaggagcgggtgcgttatgccaccaccctt
cacatcaggccagacatgaagactcatttggatcggccgctggtggtagagccaaggagc
gaagggaggaacaacatcagcaagctgagtcctgtggatgtacaggaggtggagcagacc
aaagtcagctccagtgatggggcagaagctccacgaaagcaccaccgacaccgggataag
gacaaactgggagagcaagagaagggtgatgtgaccaaggatgacaatggggaatctggt
gtcaataataaggaggagcggcacaggcagcaccggagccgcagcaaggaggtggaaggg
ggaagtaaggaagggaaaagtgatcggaaccggggtccggaagggggaaagaggcaccat
cgccgcggttcggtggaagaaggtggtgagaaggagcaccgcaggcaccggcctcaccgg
cactctgctgaacggcaaggcaaggaaggcaatgggacaatcaatggggccaggagcgag
cggcgttcccgacaccggggagggtcgaggtctgggaaccgggaaggggagcccgggtcc
aagggcgagaacggagaagagcctcacagacggcacaggttcaggaacagggcgctgtca
acctacgattcggtggagaaggagaacggggagaaggagggggaggctggtgagaaggag
caccggaaccatcagcccaaggagaataagtgtgagatcgaggctagtggaagtgtgagt
gtccctgtgcacacccttcccagcacctacctgcagaaggtgccggagcagccggaagat
gctgacaaccagaagaatgtgacacggatgattcagccaccgctggataaaaccaccact
gtgaacatccctgtcaccatcactgccccgccaggggaaaccactgtcataccaatgaac
aatgttgaatttgaaagtaaaacggaggagaagaaagacgtcgatgacttgacgaaaaat
gggcctaaaccaatcttgccttacagttccatgtttatcctaagtcctacaaatccgatt
cggcgtctgttccactacatcgtcaacctgcgctattttgagatggtcattctcatagtt
atagccctcagcagtattgccctggctgcagaagaccctgtccaagccgagtcaccaagg
aatgatgctttgaaatacttggattatatatttacgggtgtctttacctttgagatggtg
atcaagatgattgacttagggctgttactccatcctggctcctacttccgtgacctgtgg
aatatcctggacttcattgtggtcagtggggccttggtggcatttgccttctcgagtttc
atgggaggaaccaaaggcaaggacatcaacacaatcaagtcactgcgagttctgcgggtc
ctaagaccactgaagaccattaaacggctgccaaaactaaaggctgtctttgactgtgtg
gtgaattccctgaagaatgtcctcaatatcctcattgtttacatgctcttcatgttcatt
tttgctgtcattgctgtgcagctcttcaaaggtagattcttctactgcactgatgagtca
aaggagctggagaaggattgcaggggtcagtacctcgattatgaaaaaaatgaggtagag
gcacagcccagggaatggaaaaaatatgagttccactatgacaacgtgctctgggctctg
ctcacactcttcactgtctccacaggcgaagggtggccaactgtgctgaagcactcggtg
gatgccacctacgaggaacagggccccagccctggctaccgaatggaaatgtccatcttt
tacgtggtgtattttgttgtcttcccttttttctttgtgaacatctttgtggcgttaatc
atcatcaccttccaagagcaaggagataaagtgatgtcagagtgcagccttgagaaaaat
gagagggcctgcatagacttcgccataagtgccaagccactgacccgctacatgcctcag
aacaagcaatcttttcagtacaagatgtggaaatttgtggtgtcccctccctttgagtat
tttatcatggtcatgattgcactcaataccattgtcctcatgatgaagttctatgatgct
ccagaagcatatgaagaaatgttgaaatgcctgaatattgtgtttacatccatgttttca
atggaatgtgtgctgaagatcattgcctttgatgtactgaattatttccgagatgcctgg
aatgtctttgattttgtaacagtgttgggaagtattactgatattttagtaacagagatt
gcggacacggacaacttcatcaacctcagcttcctgcggctcttcagggcagccagactt
atcaagctcctccggcagggttacacaatccgcatcttgctctggacatttgtgcagtca
tttaaggccttgccttatgtgtgtctcctcattgcaatgctcttcttcatctatgccatc
attggcatgcaggtatttgggaacattgctctggatgatgaaacctccattaataggcac
aataatttccgtaccttcctccaagccctgatgcttctgttcaggagtgccacgggggaa
gcctggcacgagatcatgctgtcgtgcctgagcaacagagcctgtgacccactttctggc
ctcaccaaaaatgaatgcggtagcgactttgcctatttctactttgtgtcgttcatcttc
ctctgctccttcctgatgttaaacctgtttgtggctgtgatcatggacaactttgaatac
ctaacgagagactcctccatccttgggccccatcatttggatgagtttgttcgcgtctgg
gctgaatatgacccagctgcctgcgggcgcatcagttacacagacatgtatgagatgctg
agacacatgtccccacctctaggccttggaaagaaatgcccagctcgtgttgcctataag
cgcctagtgcggatgaacatgccaatctcacctgaagatttaaccgtccacttcacgtcc
acactgatggccctgatccgcactgccctggaaatcaagctcgcctcagggggtgttaag
cagcaccagtgtgatgcagagttgaggaaggagatctcgctggtttggcccaacctgtcc
cagaagactctggatttgctggtgcctcctcataaacctgatgagatgaccgtggggaag
gtctacgcagcgctgatgatattcgacttctacaagcagaataagaacagcagggaacaa
gtccaccagccgcctggaggcctgtgtcagcctggaccggtgtcactcttccaccccctg
aaggccactttggagcaaacccaacctgcagcattcagcaacgcaaaggctttccttcgt
cagaagagctcagcctcactcaacaatgggggtgccttgccagccccagagggtgggatc
aaagagtctagttcttggggaacccaacgcacccaggatgtgttttatgaaaccaggaca
ccagcttttgaacgaggccactcagaagaaatccccattgaacgggtggtagaaatgagg
gaaattagccccacacttgccaatggagagcaccaaccaggcctggagagccaggggcgg
gcagcttccatgccgcgcctggctgctgaaactcagcccatcccggacacaagccccatg
aagcgctctgtctccacgctgaccccgcagcgtcctcaccccatgcacctctacgagtac
tccttggagcgcatgccaccggagcaagtgcatcaccaccaccaccaccgctgccaccgg
cggaaagagaagaagcagaagtccttggacaggtccccccatcagctggccgatggacaa
gctgtggcccagtctgcggagtcttcttccaaggacaagaagcaggaacgcggccggtcc
caagagaggaagcagcactcttcctcctcctctgaaaagcagcgcttctactcctgtgac
cgctacggcagccgggatcgttctcagcccaagtctactgatcagagcaggcccacctca
cccaacggagggccagagcaaggtccacacagacagggcagtggttcagttaatgggagc
cccttgctgtcgacatctggtgctagtaccccatgccggggtcggaggcagctcccacag
actccactcaccccacgccccagcatcacttacaagaccgctaactcctcgcccgtgcac
ttcaccactttccaacctgtcctgcccaccttctccccgggacgcttgagccgcggcttg
tccgagcacaacgcgctgctgcggggagaccagcagccgccggtggtggcccgcatcggc
tccgacccctacctgggccaccgcgacgacgccgacagcccctaccatgcggtgccagag
gacacgctcaccttcgaggaggctgtggccaccaactcgggacggtcctcaaggacttct
tacgtctcctctttgacctcccaatctcaccaaatccgcagggtgcccaacggttaccat
tacacgctgggtctcaacacaggccccgggactggcaccagaggacgtagctactaccac
gaagctgatgaggatgactggtgctag
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integrated database retrieval system
