Strigops habroptila (Kakapo): 115617098
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Entry
115617098 CDS
T08851
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115617098 (EXOSC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115617098 (EXOSC2)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
115617098 (EXOSC2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
115617098 (EXOSC2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
EXOSC1
Motif
Other DBs
NCBI-GeneID:
115617098
NCBI-ProteinID:
XP_030363070
UniProt:
A0A672TII1
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Position
15:complement(5271592..5276183)
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AA seq
294 aa
AA seq
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MASVTMRLPVSRKPVALNAPQGPEKHLVAPGDTITTDTGYMRGHGTYVEDDKLIASVAGV
VERVNKLICVRALNTRYNGEVGDVVVGRITEVQQKRWKVETYSRLDSVLLLSSINLPGGE
LRRRSIEDELAMRDCLQEGDLISAEVQSVFADGALSLHTRSLKYGKLSQGVLVQVSPSLV
KRQKTHFHDLPCGASVILGNNGYIWIYPTSEQRDEETGGFTTNLEPVSMSDREVISRVRN
CIVALVTHKLMLFDTSVLYCYEASLPHQIKDILKPEVMEEIVLETQHRLLDLEG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgtcaccatgcggctgccggtatcgcgcaagccggtggcgctaaacgcgccg
cagggccccgagaagcacttggtggctccgggggacacgatcaccacggatacaggctac
atgaggggccacggcacgtacgtggaggatgacaagctcatcgcctcggtggccggcgtg
gtggagagggtgaacaagctgatctgtgtccgagcgctgaacacccggtacaacggtgag
gtcggcgatgtcgtggtcgggaggattacggaggttcagcagaagcgatggaaggtggag
acgtattccaggctagattcagtcctcttgctgtcatctataaacttacctggtggggaa
ctgagaaggagatcgatagaagacgagcttgcaatgagggactgtctgcaggaaggggac
ctcatcagtgcagaggtgcagtctgtattcgctgatggggcattatcgctgcacacacgg
agtctgaaatacgggaagctttcccagggtgtgctcgtccaggtctcaccgtctcttgtg
aaacgccagaagactcacttccacgacctgccctgtggtgcgtctgtgatcctcggcaac
aatggttacatctggatctatccaacttcagagcagagagatgaagagacagggggcttc
accaccaacttggagcctgtttccatgtctgaccgggaggtgatctcacgggtccgaaac
tgcattgtagctctggttactcataagttgatgctctttgacaccagcgtcctgtattgc
tatgaagcatcccttcctcatcagatcaaggacattctcaaaccagaggtgatggaggag
atcgttctggaaacccaacacaggttgctggatctggagggatag
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