KEGG   Strigops habroptila (Kakapo): 115617098
Entry
115617098         CDS       T08851                                 
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
shab  Strigops habroptila (Kakapo)
Pathway
shab03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:shab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    115617098 (EXOSC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shab03019]
    115617098 (EXOSC2)
Messenger RNA biogenesis [BR:shab03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     115617098 (EXOSC2)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     115617098 (EXOSC2)
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 EXOSC1
Other DBs
NCBI-GeneID: 115617098
NCBI-ProteinID: XP_030363070
UniProt: A0A672TII1
LinkDB
Position
15:complement(5271592..5276183)
AA seq 294 aa
MASVTMRLPVSRKPVALNAPQGPEKHLVAPGDTITTDTGYMRGHGTYVEDDKLIASVAGV
VERVNKLICVRALNTRYNGEVGDVVVGRITEVQQKRWKVETYSRLDSVLLLSSINLPGGE
LRRRSIEDELAMRDCLQEGDLISAEVQSVFADGALSLHTRSLKYGKLSQGVLVQVSPSLV
KRQKTHFHDLPCGASVILGNNGYIWIYPTSEQRDEETGGFTTNLEPVSMSDREVISRVRN
CIVALVTHKLMLFDTSVLYCYEASLPHQIKDILKPEVMEEIVLETQHRLLDLEG
NT seq 885 nt   +upstreamnt  +downstreamnt
atggcctccgtcaccatgcggctgccggtatcgcgcaagccggtggcgctaaacgcgccg
cagggccccgagaagcacttggtggctccgggggacacgatcaccacggatacaggctac
atgaggggccacggcacgtacgtggaggatgacaagctcatcgcctcggtggccggcgtg
gtggagagggtgaacaagctgatctgtgtccgagcgctgaacacccggtacaacggtgag
gtcggcgatgtcgtggtcgggaggattacggaggttcagcagaagcgatggaaggtggag
acgtattccaggctagattcagtcctcttgctgtcatctataaacttacctggtggggaa
ctgagaaggagatcgatagaagacgagcttgcaatgagggactgtctgcaggaaggggac
ctcatcagtgcagaggtgcagtctgtattcgctgatggggcattatcgctgcacacacgg
agtctgaaatacgggaagctttcccagggtgtgctcgtccaggtctcaccgtctcttgtg
aaacgccagaagactcacttccacgacctgccctgtggtgcgtctgtgatcctcggcaac
aatggttacatctggatctatccaacttcagagcagagagatgaagagacagggggcttc
accaccaacttggagcctgtttccatgtctgaccgggaggtgatctcacgggtccgaaac
tgcattgtagctctggttactcataagttgatgctctttgacaccagcgtcctgtattgc
tatgaagcatcccttcctcatcagatcaaggacattctcaaaccagaggtgatggaggag
atcgttctggaaacccaacacaggttgctggatctggagggatag

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