Strigops habroptila (Kakapo): 115617151
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Entry
115617151 CDS
T08851
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115617151 (GAPVD1)
Membrane trafficking [BR:
shab04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
115617151 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
DUF5996
Motif
Other DBs
NCBI-GeneID:
115617151
NCBI-ProteinID:
XP_030363215
UniProt:
A0A672UKI1
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All DBs
Position
15:3392087..3423092
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AA seq
1488 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYRTAWISKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKL
NQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLIERFSPVQQEKLFGEKGT
EKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PRMKSNLAKFDKSCVAAFLDVVIDGRAVETPPMSSVNLLEGLSRTVVYMTYSQLTTLVGF
MRNVMSSDQLKEDRMALENLLANLPQNKPGKSCSLEMTPYNTPQLSPATTPANKKNRLPI
GQQLAAITAWDTSATNLSAHITLVTPFATRSRSRSNILMDQHGDHEGSSQETIPEVQPEE
VLVISLGTGPQITPGMMSENEVLNMQLADGGQGDVPVDENKLHGKPDKTLRFSLCSDNLE
GISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKF
EIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPG
SGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDV
REVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDETAHGASQ
LTSPPSQTDSLLALFDPLSSNEGVSAVVRPKVHYARPSHPPPDPPILEGAMGGNEARLPN
FGSHSLIPTDLEAFKQRHSYPERLVRSRSSDIVSSVRRPMSDPGWNRRPGNEERELPMPA
TNAGAAGLVAASQSSSSSPSKDSSRGEIEERKDSDDEKSDRNKPWWRKRFVSAMPKAPIP
FRKKEKQEKDKDDMVPDRYATLQDDPSPRLSAQAQAAEDILDKYRNAIKRTSPSEGAIVN
YDGAEAIGDGESMHDSPRDEALQNMSADDLPDSASQVAQPQSSAFSYRDAKKKLRLALCS
ADSVAFPMLTHSTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNLMAQLQETMRCVSR
FDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFT
TVCVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDAIWQNASEEQL
QDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHKALQIPEVYLR
EAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVL
IKANPPCLLSTVQYISSFYANCLSGEESYWWMQFTAAVEFIKTIDDRK
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctggatatacacacgctggctcatcacctcaagcaggaacggctctatgta
aactcagaaaagcagctcattcagaggctcaatgcagatgtattgaagacagctgaaaag
ctgtaccgcacagcatggatttccaagcagcaaaggattaacttggacagactgattata
acaagtgctgaagcttctcctgctgaatgttgccagcatgctaaaatcttggaggacacc
cagtttgtggatgggtataagcagttgggatttcaggagactgcttacggagaattccta
aacagattgagagagaaccctaggcttattgcatcctgtctggttgctggagagaagctc
aaccaggacaacacgcagagtgtcatccacacagtctttacctccatttatggcaactgc
atcatgcaggaggatgaaagctacctcctccaggtcctgcgttacttgattgagtttgaa
ctcaaggaaagcgacaaccctaggcggctgctgagacgaggcacttgtgccttcagcatc
ttgttcaaacttttctctgaaggactcttttctgcaaaactttttcttactgcaacttta
catgagccaatcatgcagctgctggttgaagatgaagaccatttggagactgatccaaac
aagttaattgagagattctccccggtacaacaggaaaagttatttggagagaaaggcacg
gaaaagttcaagcaaagagtccaagagatggttgactccaatgaggccaagctggtgacc
ttggtgaacaaattcattggctatctcaaacaaaacacttactgttttcctcacagcttg
cgatggattgtgtcgcaaatgtacaaaacgctctcgtgtgtagacaggctggaggttggg
gaggtcagagcaatgtgcacagatctccttctagcctgtttcatctgtcctgcaattgtt
aacccagaacagtatgggatcatttctgatgctcctataaatgaggtggcaagatttaat
ctgatgcaggttgggagacttctgcagcaactggccatgacaggttctgaagagggagac
ccacgtatgaagagcaaccttgctaaatttgacaaaagctgtgttgctgcctttctggat
gtagttattgatgggcgtgcagttgaaactcctccgatgtcttctgttaaccttctggag
gggttgagcagaacagtggtttacatgacatacagccagctaactactctggttggcttt
atgcggaatgtaatgtcaagcgaccagcttaaggaagatcggatggctttggaaaacttg
ctggcaaacttaccccagaacaaaccagggaaaagctgcagccttgaaatgactccgtat
aataccccccaactttctcctgcaactactccagctaacaaaaaaaatcgattgccaata
ggacagcagttggcagccattactgcctgggatacttctgctaccaatctttctgctcat
ataactctagtaaccccttttgcaactcgtagcagaagtagatcaaacattctaatggat
cagcatggagatcatgaaggatcctcccaggagactatcccagaagttcagcctgaagaa
gtgctggtgatttctttggggacaggtccacagattactccaggaatgatgtcagaaaat
gaggtcttaaatatgcagcttgcagatggtggacaaggagatgtccctgttgatgaaaac
aaactccatggtaaacctgataaaaccttgcgcttttccctctgcagtgataatctggaa
ggaatatctgaaggtccttccaatcgctccaactccgtgtcatctttggatttagaagga
gagtctgtgtcggagcttggcgcaggcccttctgggagcaatggtgtagaagctctgcag
ctgttagagcatgaacaagccacaactcaggataatcttgatgacaagctccgtaaattt
gaaatccgtgatatgatggggttgactgatgacagagatatatcagaaactgtgagtgaa
acttggagtacagatgtcttgggaagtgacttcgatccaaatattgatgaagatcgtttg
caagaaatagcaggtgcagctgcagagaacatgctaggcagcttgctgtgtttaccaggt
tcaggatccgtgttgcttgatccctgcacaggttcaaccatatcagaaaccacaagtgag
gcatggagtgtggaagtattaccaagtgattcagaggccccagacttaaaacaggaggaa
agactacaagaactggaaagctgttctgggctgggtagcacatctgatgacacagatgta
agggaggtcagttctcgacccagcacaccaggcctcagcgttgtatcaggtattagtgcc
acatctgaagatattcctaataagattgaggatctcaggtctgagtgcagctctgacttc
gggggaaaagattctgtgacgagtcctgacatggatgaaacagcccacggagccagtcag
ttgacatctcctccttctcaaacagattctttgcttgcactgtttgaccctctgtcatca
aatgagggtgtatcagctgtagtaaggcctaaggtacactatgcaagaccctctcatcca
ccaccagatccaccaatcttggaaggagccatgggaggtaacgaggcccgattaccaaac
tttgggtctcactctttaattccaactgatttagaagcattcaaacagaggcattcttac
ccagagaggctagtccgcagtaggagttcagatatagtatcatcagttcggagacctatg
agtgatcctgggtggaacagacgtcctggtaatgaggagagggagcttcctatgccagcc
acaaacgctggagcagcaggtctggtggctgcgtcacagtcgtcatcttcatctcccagt
aaagactcctctaggggagagattgaagaacgaaaagacagtgatgatgagaagtctgac
agaaacaaaccctggtggaggaagcgttttgtgtctgccatgcccaaagctcctattcca
tttagaaagaaagaaaaacaagaaaaagacaaagatgacatggtgcctgacagatacgca
acacttcaagatgatcccagcccaaggctcagtgcacaagcacaagctgcagaggacatt
ctggacaaatacaggaatgcaatcaagagaaccagtcccagtgaaggagccatcgtaaac
tatgacggtgcagaggctattggtgatggtgagagtatgcatgactctccacgtgatgag
gccttgcaaaacatgtctgcagatgatctcccggactctgcaagtcaagtagcacagcca
caaagttctgctttctcctatagggatgcaaagaagaaattgagattggctctttgttca
gcagattctgttgccttcccgatgctgacacattcaacaaggaacggtctgccagaccac
acagaccctgaagataatgaaattgtgtgcttcttgaaagttcagctagctgaagctatt
aacctccaagataagaacttgatggcccagctgcaggagacaatgcgatgtgtaagccgc
tttgataacaggacctgtcgaaagctgctggcgtctattgcagaggactataggaaaaga
gctccgtacatcgcttatttaactcgatgtcgccaagggctgcaaacgacacaagcgcac
ttggaaaggctgttgcaaagagttctgcgagataaagaagtggccaacagatacttcact
acagtatgtgtaaggctgctgctagaaagcaaagaaaagaaaataagggagtttattcaa
gatttccagaaactcacagcagcagatgataaaacagcccaagttgaagattttctccag
ttcttgtatggggctatggctcaggatgccatatggcagaatgccagtgaagaacagctt
caggatgcacaattagctatagaacgcagcgtgatgaatcgtattttcaaacttgcattc
taccctaatcaggatggagatattttgcgtgaccaggtccttcatgagcacatacagagg
ttatctaaagtagtgactgcaaaccacaaagcacttcagatacctgaggtatatctccgg
gaggcaccgtggccatctgcacagtctgaaatccgcacaataagcgcttacaaaaccccc
cgagacaaagtacagtgtatcctgcgtatgtgttcaaccatcatgaacctgcttagtctg
gcaaatgaagattcagtacctggggcagatgattttgttcctgttctggtctttgttctc
ataaaggcaaacccaccttgcttgctgtccactgttcagtacattagtagtttctatgcc
aactgtttatctggagaagagtcgtactggtggatgcagttcacagcagcagttgaattc
attaaaactattgatgatcgcaaataa
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