Strigops habroptila (Kakapo): 115617282
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Entry
115617282 CDS
T08851
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03013
Nucleocytoplasmic transport
shab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115617282
03015 mRNA surveillance pathway
115617282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115617282
Enzymes [BR:
shab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115617282
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115617282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
115617282
NCBI-ProteinID:
XP_030363435
UniProt:
A0A672U261
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Position
16:838405..850447
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AA seq
479 aa
AA seq
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MATDSWALAVDEQEAAAESLSSLHLKEEKTKPDANGAVVKADDNIEKTEDEEKEDRAAQS
LLNKLIRSNLVDTTNQVEVLQRDPTSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPGNKYPQCLCLSPTYELALQTGK
VIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPRDCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE
EETLDTIKQYYVLCSNRDEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAAELSKEGHQV
ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFNKKINKLDTDDLDEIEKITN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcctgggccctggccgtggacgagcaggaggcggcggccgagtcgttg
agcagtttacacctgaaggaggaaaaaaccaaaccagatgccaatggtgccgttgtcaag
gcagatgacaacattgagaagacggaagatgaggagaaggaggacagagctgcccagtcc
ttgctgaacaagctgatccgcagcaacctggttgacaccacgaatcaggtggaggtgctg
cagagggaccccacgtcacccctctactccgtgaagtctttcgaggagctgcggctgaaa
ccacagctcctgcaaggagtctatgccatgggcttcaacagaccatctaagatacaagag
aacgcgctgcccatgatgcttgctgagcccccacagaacctgattgcacagtctcagtcc
ggcactggcaagacggctgcctttgtcctggccatgctcagtcgtgtggagcctgggaac
aagtatccacagtgtttgtgcctttccccaacgtacgagctggcactgcagacaggaaaa
gtgattgagcagatggggaagttttatccagagctgaagcttgcctatgctgtccgaggc
aataagttggagagaggtcagaagatctcagagcagattgtcatcggcactcctggcact
gtgctcgactggtgttccaagctcaaattcatagatcccaagaaaatcaaagtgtttgtg
ctggatgaggctgatgtgatgatagcaacccagggccatcaggaccagagcatccgcatt
cagagaatgctccccagggactgccagatgctgctgttctcagccacctttgaggattcc
gtgtggaagtttgctcagaaagttgttcctgacccaaacatcatcaaactgaagcgagag
gaggagacactggacactattaagcagtactatgttctgtgcagtaacagagatgagaag
ttccaggctctctgtaacatctacggcgctatcaccattgcccaggccatgatcttctgc
catactcggaagacagccgggtggctggcggctgagctctccaaggagggccatcaggtg
gcactgctcagtggggagatgatggtggagcagagagccgccgtcatcgagcgcttccga
gagggcaaagagaaggtgctggtgaccacaaacgtctgtgccagagggatcgacgtggag
caggtctctgttgttatcaattttgaccttcctgtggataaagatggaaatccagataat
gagacgtatctgcaccggatcggacgtacagggcgctttggcaagcgaggactggctatt
aacatggtggacagcaagcacagcatgaacattctcaacagaatccaggagcatttcaac
aaaaagatcaacaaattggatactgacgacttggatgagattgagaagatcactaactga
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