Strigops habroptila (Kakapo): 115617628
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Entry
115617628 CDS
T08851
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115617628 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shab03041
]
115617628 (DHX8)
Enzymes [BR:
shab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115617628 (DHX8)
Spliceosome [BR:
shab03041
]
Complex C
Other components
Step II factors
115617628 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
WHD_HA2
DEAD
AAA_22
GIPC1_GH2
PRP38_assoc
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
nSTAND_NTPase5
PhoH
TsaE
Sigma54_activ_2
AAA_16
Cas3-like_C_2
OB_RRP5_4th
Spem1
Motif
Other DBs
NCBI-GeneID:
115617628
NCBI-ProteinID:
XP_030364246
LinkDB
All DBs
Position
19:2180975..2194844
Genome browser
AA seq
1206 aa
AA seq
DB search
MRKCGGAMAELAAAEELAQLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDT
FKAVLLKNGAEFTDSLISNLLRLIQTMRPPPKSSTSKEAVVKPKSEKEKLKELFPALCRP
DNPNIRTSSLFSQTMLDEDDVKVAADALKELEALMPSADREGKQRSSDHRAKKKRRSRSR
SRDRRRRHRSRSRSRSRTRDRNRGKSRYRSRSRSWSPSRDRKDRDRYLEKSNERWRDKHI
DRPPPEEPSIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVS
KGQRVKVKVLSFTGSKTSLSMKDVDQDTGEDLNPNRRRNLVGETNEETSMRNPDRPSHLS
LVNAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEED
EDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQR
EAEMDSIPMGLNTHWVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKT
QLSIIEQRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIG
CTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDP
DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPI
FTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILY
ERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYV
VDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLT
TNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLT
RLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAK
FHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVV
SCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHEL
VLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRIS
RAFRRR
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagtgcggcggagccatggcggagctggcggcggcggaggagctcgctcagctc
gagtacctgtcgctcgtgtccaaggtgtgcacggagctggacaatcacctgggcatcaac
gacaaggacctggccgagtttgtgataagtctcgcagagaaaaataccacctttgacacg
tttaaagcagttcttctgaagaatggcgctgagttcactgattcccttattagtaacttg
cttcgtctcatccagaccatgcggcccccaccaaaatcctctacgagcaaagaggcagtt
gtcaaacccaagtcggagaaggaaaagctgaaggaattgtttccagctctttgcaggcca
gacaatcccaatatcaggaccagttctctgttctcacagactatgctggatgaagatgat
gtgaaagtggcagctgatgcacttaaagaacttgaagctctgatgcccagcgcggacaga
gagggcaagcagaggagcagtgaccaccgggcaaagaagaagaggaggagccggagtcgc
agcagggacaggaggcgcaggcacagatctcgctctaggtctcgttctaggactcgggat
aggaacaggggaaaatccagatatcggtcaaggagcagaagttggagtccaagtagggac
cgtaaagatcgagacagatatcttgagaagagcaatgagagatggagagacaaacacatt
gaccgtcccccacctgaggagccttccattggagacatctataatggcaaagtcacaagt
ataatgcagtttggatgttttgtgcaactggaaggactaaggaagcgttgggagggcttg
gtccacatctcagagcttcggagagaaggacgtgttgccaatgttgctgatgtggtgagc
aaaggacaaagagtgaaagtcaaagtcttatcctttactggatccaaaaccagcctgagc
atgaaggatgttgatcaagacactggggaagacttgaacccaaaccggaggagaaacctg
gttggagaaaccaacgaagaaacatctatgagaaacccagacagacccagtcacctgtcc
ctggtgaacgccccggaggtggaggacgacagcctcgagcggaagcgcctcacccgcatt
tcagacccagagaaatgggaaataaaacagatgattgcagctaatgtgctttccaaggaa
gagtttcctgactttgatgaggagactgggatccttcctaaagttgatgatgaagaagat
gaggacctggagattgagttagttgaggaagagccacccttccttcgaggtcatactaaa
cagagcatggatatgagtcctatcaaaatagtaaagaatccagatggttccttgtcccag
gctgcaatgatgcagagcgctttagctaaagaaaggcgagaacttaaacaagcccagaga
gaagcagagatggattctatccccatggggctcaacacacactgggtggatcctctccct
gatgtggatggaagacaaatagctgcaaacatgcgaggtattggaatgatgcccaatgat
atcccagagtggaagaaacatgcatttggtggcaacaaagcttcttatggtaagaagacc
caactttccatcattgagcagagagagagtctcccaatcttcagactgaaggagcagctg
atacaagctgtgcatgacaaccagattctgattgttattggagagacaggatctgggaaa
acaacccagatcacccagtacctggcggaggcggggtatacgtcaagaggaaagattgga
tgtactcagcctcgcagagtggctgcgatgtctgttgcgaagagggtgtcagaggaattt
ggttgctgcttgggacaagaggttggctacaccattcgatttgaagactgcaccagccct
gaaactgttatcaaatacatgacagatggcatgttattgagggagtgcttgatagatcct
gatctgacccagtatgccattatcatgctggatgaagcccatgagaggaccatacacaca
gatgtgctctttggactcctgaagaagacagtgcagaagcggcaggacatgaagctgatc
gtgacatcggcaacgttggatgctgtcaagttctctcagtatttctacgaagcgccgatc
ttcaccattcctggcagaacatacccagtagaaatcctgtacacaaaagagccagagaca
gattatttggatgccagtttgattacagtaatgcagatccacttgacagagccaccaggt
gacattttggtgtttctgactggtcaggaagagattgacactgcctgtgagatcctctat
gagaggatgaaatctctaggacctgatgttccagagttaattatcctaccagtctattca
gctttacccagtgaaatgcaaaccaggatctttgaccctgccccaccaggaagcagaaag
gttgtcatcgccactaatatcgctgagacgtctttgactattgatggaatatattatgtt
gttgatcctggctttgtgaagcagaaggtttataactccaagactggaattgaccagctg
gtggttacaccaatctcacaggctcaagcaaagcagcgagcaggaagggctgggagaaca
ggaccaggaaaatgctataggctatatacagagcgtgcttatcgagatgaaatgctaacc
accaacgtgcctgaaatccagagaacaaatttggccagtacagtactttctttgaaggct
atgggaatcaatgatttgctctcctttgactttatggatgctcccccaatggaaactctc
ataactgccatggagcagctgtacaccctgggagctctggatgatgagggactgctcact
cgactcgggcgcaggatggcagaattccccttggagcctatgctgtgtaagatgttgatc
atgtctgtacatctgggatgcagtgaagagatgttgacaatagtctccatgctgtctgta
cagaacgtgttctacaggccaaaggataaacaagcacttgctgatcaaaagaaagccaag
ttccatcagacagaaggcgaccacctcaccctgctggctgtctacaattcctggaagaat
aataagttttcaaatccctggtgctatgaaaactttatccaggcccgatccttacgcaga
gcgcaggacatccgcaagcagatgctgggcattatggacaggcacaagctggatgtggta
tcctgtgggaaggcaacagttcgggtccagaaagccatctgtagtggcttcttccgaaat
gcagcgaagaaggatccccaggaaggttatcggacacttatcgatcaacaagtagtctat
atccacccatccagtgctctcttcaacaggcagccagaatgggtggtgtatcatgaactg
gtgctgaccaccaaggaatatatgcgtgaagtgacaactattgatcctcgctggctggtg
gaatttgcaccagctttcttcaaggtttctgatccaaccaagctgagcaagcagaagaag
cagcagcgactggaacccctctacaaccgctacgaggagcccaatgcctggaggatatca
cgtgcattcaggcggcgatga
DBGET
integrated database retrieval system
