Strigops habroptila (Kakapo): 115617637
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Entry
115617637 CDS
T08851
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03013
Nucleocytoplasmic transport
shab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115617637 (CASC3)
03015 mRNA surveillance pathway
115617637 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115617637 (CASC3)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115617637 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
115617637
NCBI-ProteinID:
XP_030364266
UniProt:
A0A672TJG4
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Position
19:complement(2842544..2855794)
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AA seq
723 aa
AA seq
DB search
MADRRRQRASQDSEDSDSDSAASDSGASAASAARSPSRSGSGSRSGSPRPPHRPPRGAAG
ALSAGPRGRGGAESAAGGAAKSAPESECESEDGIEGDAVLSDYESAEDSEAEEEDYSEEE
SAKVELKQDSNDSSGSASKAEKGDEKPDSKGAVTGERQSGDGQESTEPVENKVGKKVPKH
LDDDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQA
PKTRQELIALYGYDIRSAHNPDDIKPRRMRKPRFGSPPQRDPNWSNERPNKPPRHQGADS
TSAPPRTFTNRSSAGTGRMPPPRNYPRLGGYKETRPGYRASEASVQHLSRNGEQVKQESS
YRGKRAEQTPPRDKSPEVEAAHVHSSPVKEEVPLENQATAADAAQPPPDRPIEKKSYSRA
RRTRIKAGDAGKLADEVPASEGLAPVPPKPVQAETSPPPAKSSNWESPVESSLDGLEQEM
TQMNLAEQNWAPGQSQFIQPRELRGIPNHMHVGTGPPPQFNRMEEMAVQGGRVKRYSSQR
QRPPVPEPAPPMHISIMEGHYYDPLQFQGPIYTHSESPAPLPPQGMIVQPEMHLPHPGLH
PHQTPAPMANPGLYPPPVSMPPGQPPPQQLLAPTYFSPPGVMNFGNPGYPYPPGALPPPP
PPHLYSNTQAQSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEDSKGEKSKER
SNT
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcctcgcaggacagcgaggactcggactcagactcg
gccgcctccgacagcggcgcctcggccgccagcgccgcccgctccccatcgcgctccggc
tccgggtcacgctccgggtcgccgcgcccgccgcaccgcccgccgcggggcgccgccgga
gccctcagcgctgggccgcggggccgcggcggcgccgagagcgctgcggggggagcggcc
aagagcgcgcccgagtccgagtgtgaaagtgaggacggcatcgagggagatgctgtactc
tcggattatgaaagcgcagaagactcggaggcagaggaagaggattacagcgaggaagaa
agtgccaaagtggagctgaagcaggatagtaatgattcctctggatcagcatcgaaagca
gagaaaggggatgagaaaccagactctaagggtgctgtgactggtgagaggcaaagcggg
gacgggcaggagagcactgaacccgtggagaataaagttgggaaaaaggttcccaagcac
ctggatgacgatgaggatcggaagaacccggcttacatcccacggaaagggctcttcttt
gagcatgacctccgagggcagacacaggaggaggaggtcaggccaaagggtcgtcagcgg
aagctgtggaaggacgagggccgttgggagcatgacaagttccgggaggacgagcaagcc
cccaagaccaggcaggagctgattgcgctctatggctacgacatcaggtcagctcacaac
cctgatgacatcaagccgaggaggatgcgcaaaccgaggtttgggagtcctcctcagcga
gatccaaactggtccaatgagaggcccaataagcccccaaggcaccaaggtgcagacagc
acttcagctcccccacgaaccttcaccaacaggagctctgcagggacggggaggatgccc
ccacctaggaactacccaaggctggggggctacaaagagacccgtccaggctaccgagct
tcggaagccagcgtccagcatctgtctcggaatggtgagcaagtgaaacaggagagcagc
taccgagggaagcgtgcagagcagaccccaccgagggacaagtcacccgaggtggaagca
gcacacgtccacagcagccctgtgaaggaggaggttcctttggaaaaccaagctacagct
gcagatgctgcacagccgccaccagacagaccaattgaaaagaagtcttattcccgggca
agaaggaccagaatcaaagctggggatgcagggaagctggcagatgaagtgcccgcttcg
gaagggctggctcctgtgcctccaaaaccagtgcaagctgagacatcccccccaccagcc
aagagcagcaattgggagtcgccagtagaatccagcttggatggactcgagcaagaaatg
acccaaatgaatctcgctgagcagaactgggctccagggcagtctcagttcatacagccc
cgggagctgaggggtattcctaaccatatgcacgtgggaactgggccaccgcctcagttt
aacaggatggaggaaatggccgtgcaggggggccgtgtcaaacgctactcgtcgcagcgg
cagagaccaccggtgccggagcctgccccccccatgcacatcagcatcatggaagggcac
tactacgacccactacaattccagggaccaatctacacccacagtgagagcccagccccg
ctgccaccccaggggatgatcgttcagccagaaatgcacctccctcatccaggtttacat
ccccaccagacgccagcccccatggcaaaccctgggctgtaccctccgcccgtctccatg
cccccggggcagcccccgccacagcagctgctggcaccaacttacttctcccctcctgga
gtcatgaatttcgggaatcctggctatccctacccgccgggagcgctgccccctccaccc
cctccgcatctctattccaacacgcaggcccagtcccaggtgtatggaggggtcacctac
tacaacactgtccagcagcaagtgcagcccaagccttctcctccccgaaggacatcccag
cccgtgactatcaagccaccacctcctgaggacagcaaaggtgaaaaatccaaggagagg
agcaacacgtag
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