Strigops habroptila (Kakapo): 115617791
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Entry
115617791 CDS
T08851
Symbol
HDAC5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
115617791 (HDAC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shab03036
]
115617791 (HDAC5)
Enzymes [BR:
shab01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
115617791 (HDAC5)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
115617791 (HDAC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Utp11
Motif
Other DBs
NCBI-GeneID:
115617791
NCBI-ProteinID:
XP_030364583
LinkDB
All DBs
Position
19:5620560..5634917
Genome browser
AA seq
1029 aa
AA seq
DB search
MDPQSDAEGGSGREPSLELLPHAQLLPGPGPEGPGPEPGPCRGLDAAARERQLQRELVAL
KQQQQLQKQLLFAEFQKQHEHLTRQHEVQLQKHLKQQQEALAARRQQELEQQRQRERQEL
EQQRLEQLQALRKDRGRDSAIASTEVKLKLQEFLLSKTKEPGTAPPNHSLPQHPTCWAHH
TSLDQSSPPQTGSPGTPPSYRPPLLGTYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRS
SPLLRRKDGAVLSACRKRAVEITVCSVSSSSSAPGSGPSSPNSSHSAENGLTGSVPNIPA
QQLLPQPRPLPLDGVPQLSLYTSPSLPNISLGLPGPGPPLSVEAERAGGVPALRPAAALP
AQLLSSPSLLGGALDGDPAPGPASLLQHVLLLEQARQQSGLLAVPLHARAALAPGDRAGS
VRVVPKLPRHRPLSRTQSSPLPQSPQALPHALPHGALQHHFLDKQQVPLGKLLPKAGELP
RAPPTHREETEEELTEQQSPPPRDRDPPPAPPLPDPPQDPEEPGDSGDEPEGPDGPELGG
TYQQALPEAPLPLFPGSPPALLALPHPALARTHSSPPSVRPPPPDGGPQLRFSTGLVYDT
FMLKHQCTCGNTNIHPEHAGRIQSIWSRLQETGLLGKCERIRGRKATLEEIQTVHSEHHT
LLYGTSPLNRQKLDSKKLLGPISQKTYAVLPCGGIGVDSDTVWNELHSPSAVRTAVGCLL
ELAFKVAAGEIRNGFAVIRPPGHHAEESAAMGFCFFNSVAISAKLLQQKLSVSRILIVDW
DIHHGNGTQQAFYSDPAVLYISLHRYDDGNFFPGSGAPEEVGSGMGVGFNINIAWTGGVD
PPIGDVEYLTAFRTVVMPVASEFSPDVVLVSAGFDAVEGHLSPLGGYSVSAKCFGHLTKQ
LMMLAGGRVVLALEGGHDLTAICDASEACVSALLGMELEPLDPSLLQQKPNVNAVATLEK
VIEIQSRHWGSLKRGGAPWLSAGGDAEAEALSAMAQLSVGAEHGSSDPRPSIPAMPRPAE
EPMEAEPAL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggacccccagagtgatgcagagggggggtccggccgcgagccctccctggagctcctg
ccccacgcccagctcctgcccggcccagggccggaggggccggggccggagccggggccg
tgccgggggctggacgcagcggcgcgggagcggcagctgcagcgggagctcgtggccctc
aagcagcagcagcagctccagaagcagctgctcttcgccgagttccagaagcagcacgag
cacctcacgcgccagcacgaggtgcagctccagaagcacctcaagcagcagcaggaggct
ctggccgcgcgccggcagcaggagctggagcagcagcggcagcgggagcggcaggagctg
gagcagcagcgcctggagcagctgcaggcgctgcgcaaggaccgcggccgggacagcgcc
atcgccagcacggaggtgaagctgaagctgcaggagttcctgctcagcaaaacaaaggag
ccgggcacggccccccccaaccattccctcccccagcaccccacttgttgggcccatcac
acgtcgttggaccagagctcccccccccagacgggcagtcctgggacccccccgtcctat
cgcccccccctgctcggaacatacgattcccgggatgacttcccgctgcgcaagactgca
tcggagcccaacctgaaggtccgctcccggctgaagcagaaggtggcggagcgccggagc
agccccttgttgcggaggaaggacggagccgtgctcagcgcctgcaggaagagagcggtg
gagatcacggtgtgctcggtgagcagcagcagcagcgcccccggctccgggcccagctcc
cccaacagctcccacagcgccgagaacgggctcacgggctccgtgcccaacatccccgcg
cagcagctcctgccgcagccccggccgctgcccctcgatggtgtcccccagctcagcctc
tacacgtccccgtcgctgcccaacatctccctggggctgccggggcccggcccccccctt
tctgtggaggccgagcgcgcagggggggtccctgcgctgcgccccgcagccgcgctgccc
gcacagctcctgagctccccctcgctgctggggggggccctggacggggaccccgcgccc
ggccccgcgtccctgctgcagcacgtgctgctgctggagcaggcgcggcagcagagcggg
ctcctcgccgtcccgctccacgctcgcgccgcgctggcgcccggtgaccgcgccggctcc
gtgcgggtggtaccgaagctgccgcggcaccggcccctcagccgcacgcagtcgtcccca
ttgccccagagcccgcaggcgctgccccacgcgctgccccatggcgccctccagcaccac
ttcctcgacaagcagcaggtcccactcggcaagctgctgcccaaggctggggagctcccg
cgggccccccccacgcaccgcgaggagacggaggaggagctgacggagcagcagtcgccc
cccccgcgggaccgggaccccccccccgcgcccccgctcccggaccccccccaggacccc
gaggagccgggggacagcggggacgagcccgagggccccgatggccccgagctggggggc
acctaccagcaggcgctgcccgaggcgccgctgccgctgttcccgggctcccccccggcg
ctgctggcgctgccgcacccggcgctcgcccgcacacactcgtccccccccagcgtccga
ccccccccacccgacgggggcccccagctccgcttcagcacagggctggtgtacgacacc
ttcatgctgaagcaccagtgcacgtgcggcaacaccaacatccacccggagcacgccggc
cgcatccagagcatctggtcccggctgcaggagacggggctgctgggcaagtgcgagcgc
atccggggcaggaaggcgacgctggaggagatccagacggtgcactcggagcatcacacg
ctgctctatggcaccagccccctcaaccgccagaagctcgacagcaagaagctgctgggt
cccatcagccagaagacgtacgcggtgctgccgtgcggcggcatcggggtggacagtgac
acggtgtggaacgagctgcactcgcccagcgccgtgcgcacggccgtgggctgcctgctg
gagctcgccttcaaggtggccgccggcgagatccggaacggcttcgctgtcatccgcccg
cccgggcaccacgctgaggagtccgcggccatgggcttctgcttcttcaactcagtggcc
atctcagccaagctgctgcagcagaagctcagcgtgagcaggatcctcatcgtggactgg
gacatccaccacggcaatggcacccagcaggcgttctacagcgacccggccgtgctctac
atctccctgcaccgctacgacgacggcaacttcttcccgggcagcggcgcccctgaggag
gtgggcagcggaatgggggtgggcttcaacatcaacatcgcctggaccgggggtgtggac
ccccccattggggatgtggagtatctcactgccttcaggaccgtggtgatgccggtggcc
agtgagttctccccggacgtggtgctggtctcggccgggttcgacgccgtcgaggggcac
ctctcccccctcgggggttactccgtcagcgccaaatgctttgggcacctcacgaagcag
ctgatgatgctggcgggggggcgcgtggtgctggcgctcgagggggggcatgacctcacg
gccatttgtgacgcctctgaggcctgtgtgagcgccctgctcggcatggagctggagccg
ctggacccgtccctgctgcagcagaagcccaatgtgaacgcggtggccacgctggagaag
gtcatcgagatccagagccggcactggggctctctgaagcgcgggggggccccgtggctc
agcgctgggggggacgcggaggctgaagcgctctcggccatggcccagctctcggtgggg
gcagagcatgggagcagcgacccccggcccagcattcccgccatgcccaggccagcggag
gagccgatggaggcggagcccgcgctgtga
DBGET
integrated database retrieval system
