Strigops habroptila (Kakapo): 115617816
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Entry
115617816 CDS
T08851
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115617816 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shab03021
]
115617816 (SMARCD2)
03036 Chromosome and associated proteins [BR:
shab03036
]
115617816 (SMARCD2)
Transcription machinery [BR:
shab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115617816 (SMARCD2)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115617816 (SMARCD2)
PBAF complex
115617816 (SMARCD2)
GBAF(ncBAF) complex
115617816 (SMARCD2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
115617816
NCBI-ProteinID:
XP_030364633
LinkDB
All DBs
Position
19:complement(4009977..4025862)
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AA seq
504 aa
AA seq
DB search
MAGRGSFPLSPLPPAAAPPPPGPGPAIMRGPSPVPAAAAAAAAPGYRPMGPAAAQYQRPG
MPPGSRMPMAGLQVGPPGAPPYGAASPMRPGLPQSMMDPFRKRLLTPQAQPPLATQRRGV
KRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLR
IYISNTFTPAKEEGEGGERVASWELRVEGKLLEDPSKQKRKFSSFFKSLVIELDKELYGP
DNHLVEWHRLPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQT
RASIMQALWLYIKHNKLQDSHEKEYINCNRYFRQIFNCIRMRFSEIPMKLAGLLQHPDPI
IINHTISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDAKIHETIESI
NQLKTQRDFMLSFSNNPQDFIQEWIKSQRRDLKIITDVIGNPEEERRAEFYQQPWAQEAV
GRHIFAKVQQRRQELEQVLGIRLT
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggccggccgcggctccttcccgctcagcccgctgccccccgccgccgccccgccgccc
ccggggcccggccccgccatcatgcgcggccccagcccggttcctgccgccgccgctgcc
gccgccgcgccgggataccgccccatgggccccgccgccgcgcagtaccagcgccccggg
atgccgcccggcagcaggatgcccatggcagggctgcaggtgggaccaccaggagccccc
ccatatggagcagcctccccgatgagacccggcctgccacagtccatgatggatcccttc
aggaagcgcctgctgaccccccaggcacagcccccactggccacccagaggagaggggtg
aagaggaggaagatggctgacaaggtgctgccacagcggatccgggagctggtcccagaa
tcccaggcctacatggacctcctcgccttcgagcgcaagctggaccaaaccatcgctcgg
aagaggatggagattcaggaggccattaagaagccgctgacgcaaaagcggaagctgagg
atttacatctccaacactttcaccccggccaaagaagaaggggaaggtggggagcgtgtg
gcctcctgggagctgcgtgtggagggcaaactgctggaggatccgagcaagcagaagagg
aagttctcctcctttttcaagagcctcgtcatagagctggacaaagagctgtatgggcca
gacaaccatctagtggagtggcaccggctgcccacaacccaggagaccgacggcttccaa
gtgaagcgtcctggcgatgtcaatgtgaaatgcactctgctgctcatgctggatcaccag
cctccacagtacaaactggaccctcgcctggctcgcctgctcggggtgcacacccagacc
cgtgccagcatcatgcaggcgctctggctctacatcaagcacaacaagctgcaggacagc
cacgagaaggagtacatcaactgcaaccgctacttccgccagatcttcaactgcatccgc
atgcgcttctctgagatccccatgaagctggcggggctcctgcagcacccagatcccatc
atcatcaaccacaccatcagcgtggaccccaatgaccagaagaagacagcgtgctacgac
attgacgtggaggtggatgatcccctgaaggctcagatgagcaacttcctggcttccacc
accaaccagcaggagatcgcctcgctggatgccaagatccatgagaccatcgaatccatc
aaccagctgaagacgcagcgcgatttcatgctgagcttcagcaacaacccccaggatttc
atccaggaatggatcaaatcccagaggagggacctcaagatcataacggatgtgatcggg
aaccccgaggaggagcggcgagccgagttctaccagcagccctgggcgcaggaggctgtg
ggcagacacatctttgccaaggtccagcagcgtcggcaggaactggaacaagtgctcggg
atccgcctcacctaa
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