Strigops habroptila (Kakapo): 115617817
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Entry
115617817 CDS
T08851
Symbol
PSMC5
Name
(RefSeq) LOW QUALITY PROTEIN: 26S proteasome regulatory subunit 8
KO
K03066
26S proteasome regulatory subunit T6
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
115617817 (PSMC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
shab03051
]
115617817 (PSMC5)
Proteasome [BR:
shab03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
115617817 (PSMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_5
AAA_16
AAA_22
RuvB_N
PRS7_OB
nSTAND3
TIP49
AAA_18
AAA_28
Mg_chelatase
AAA_3
AAA_33
NPHP3_N
AAA_lid_PRS2_C
AAA_14
Parvo_NS1
ATPase
AAA_17
FapA
PhoH
IstB_IS21
AAA_24
AAA_7
AAA_25
DUF815
Sigma54_activat
DUF7006
bpMoxR
ABC_tran
DUF5906
RNA_helicase
AAA_11
Zeta_toxin
AAA_19
TsaE
HR1
Motif
Other DBs
NCBI-GeneID:
115617817
NCBI-ProteinID:
XP_030364635
LinkDB
All DBs
Position
19:4005856..4010480
Genome browser
AA seq
411 aa
AA seq
DB search
MPAEKMAVDGPEQMEMDDGKGGTGLRQYYLSKIEELQLIVNEKSQNLRRLQAQRNELNAK
VRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVA
LRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELF
EALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELF
VMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMAT
NRIDILDSALLRPGRIDRKIEFPPPNEEARWTSSRSHSRKMNLTRGXNLRKIAELMPGAS
GAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgccggcggagaagatggcggtggacgggcccgagcagatggagatggatgacgggaag
ggcggcacagggctccggcagtactacctgtccaagatcgaggagctgcagctcattgtg
aatgagaaaagccagaacctgcggcgcctgcaagcgcagaggaacgagctgaatgctaaa
gtgcgcctgctgcgggaggagctgcagctcctgcaggagcaggggtcctacgtgggagaa
gtcgtgagagccatggacaagaagaaagtgcttgtcaaggtgcacccagagggcaagttc
gtggtggatgtggacaagaacatcgacatcaacgacgtgaccccgaactgccgcgtggcc
ctgcgcaacgacagctacaccctgcacaagatcctgcccaacaaagtggaccctctcgtg
tccctcatgatggtggagaaggttccagattctacttacgagatgatcggcggcttggac
aagcagattaaggagatcaaggaggtgatcgagctgcccgtcaagcaccctgagctcttt
gaggcgctggggatcgcccagcccaagggggtgctgctctacggaccccctggcacaggc
aagaccttgctggccagggctgtggcccaccacaccgactgcaccttcatccgcgtgtcg
ggctcggagctggtgcagaagttcattggggaaggcgcccgcatggtgcgggagctgttc
gtgatggcccgggagcacgctccctccatcatcttcatggatgagattgactccatcggc
tcgtcccgcctggagggcggctctggtggggacagtgaggtgcagcgcacgatgctggag
ctcctcaaccagctcgatggcttcgaggccaccaagaacatcaaggtgatcatggccaca
aaccgcatcgacatcctggactcggctctgctgcgccccggccgcatcgacaggaagatc
gagttccctcctcccaatgaggaggcccgctggacatcctcaagatcccactcccggaag
atgaacctgacgcgaggcnataacctgcgcaagatcgcggagctgatgccgggcgcatcg
ggcgcggaggtgaagggggtgtgcacagaggctggcatgtacgcgctgagggagaggcgg
gtgcacgtcacgcaagaagactttgaaatggctgttgccaaggtgatgcagaaggacagc
gagaagaacatgtccatcaagaagctgtggaagtaa
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