KEGG   Strigops habroptila (Kakapo): 115618017
Entry
115618017         CDS       T08851                                 
Symbol
WDR18
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
shab  Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:shab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:shab03009]
    115618017 (WDR18)
Ribosome biogenesis [BR:shab03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    115618017 (WDR18)
SSDB
Motif
Pfam: WD40 WD40_alt WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz EIF3I WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_EML NBCH_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_IFT122_1st Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_WDR75_2nd Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_Nup120_160 Beta-prop_DCAF12 Beta-prop_IP5PC_F Ge1_WD40
Other DBs
NCBI-GeneID: 115618017
NCBI-ProteinID: XP_030364971
LinkDB
Position
20:1615507..1622962
AA seq 432 aa
MAAPMEVALVTDAAGPLCNCSAWELHSGSALPGYRGGNSGPRGLALLGGEHLLGAQLGKS
YINVWELQRKDQLQQKIICPGPVTCLTASPNGLYILVGVAESIYLWEVSNGNLLAILNRH
YQDLTCLCFTDDSSHFLSGAKDCLALVWNLYSVLQAEPSQIPDPRHVWSRHSLPITDLCC
GFGGPLARAATASLDQTAKLWEVSSGELLLSVLFDVGIMAVTLDLSEYHMFCGGMDGSIF
QVDLCAWPVQRDRTFQTERENGKVFKGHRNQVTCLSVSTDGSLLLSGSHDETVRLWDIQS
KQCLKTMNHKGPVTNAFIVLAPANMLNPDGKPSAPLPKFSKHLHGTESSDEQGSEGVTLR
LGLHQQEAGESYLEKARKTYSQMYSTREKNLVGDQEHLTIQVSELEEEVSTLRKINKNLF
DFSARIITKPAK
NT seq 1299 nt   +upstreamnt  +downstreamnt
atggcggcgcccatggaggtggcgctggtgacggacgcggcggggccgctgtgcaactgc
tcggcctgggagctgcactcgggctcggcgctgcccggctaccgcggcggcaacagcggc
ccgcgcgggctggcgctgctgggcggcgagcacctgctgggcgctcagctcggcaagagc
tacatcaacgtctgggagctccagaggaaggaccagctccagcagaagatcatatgcccc
gggccggtgacctgcctgacagcctctcccaatgggctctacatcttggtcggggttgct
gagagcatctacctgtgggaggtctccaatgggaacctgctagccatcctgaacagacac
taccaggacctcacatgcctctgctttactgatgacagcagccactttctctcaggggca
aaggactgtctggccctggtgtggaacctttacagcgtgctgcaggcagagccctcccag
atccccgacccacgccacgtgtggtcccgacacagcctccccatcacagacttgtgctgt
ggctttggagggcccttggcacgagctgccacagcctccctggaccagacagcgaagctc
tgggaagtctcatctggggagctcctgctttctgtcctcttcgatgtgggcatcatggcc
gtgactcttgatctctccgagtaccacatgttctgcggtggcatggacggatccatcttc
caggttgacctctgtgcctggccggtccagagagaccggaccttccagacggagcgggag
aatgggaaggtcttcaaagggcacaggaaccaggtgacgtgtctgtcggtgtccacggat
ggcagcctcctgctttcgggctcgcacgatgaaacagtccggctgtgggacatccagagc
aagcagtgcctgaagacgatgaatcacaaaggtccggttacaaacgccttcatcgtgctg
gccccagccaacatgctcaaccccgatgggaagcccagcgcgcccctgcccaagttcagc
aaacacctccacggcaccgagagcagcgacgagcagggcagcgagggggtgacgctgcgc
ctggggctccaccagcaggaggctggagagagctacctggagaaggccaggaagacctac
tcgcagatgtactcgacaagggaaaagaacctggtgggagaccaggagcacctgacgatc
caggtgagtgagctggaggaggaggtgagcaccctccggaagatcaacaagaacctcttc
gacttctccgctcgcatcatcaccaaacccgccaaatga

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