Strigops habroptila (Kakapo): 115618428
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Entry
115618428 CDS
T08851
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115618428 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115618428 (LSM1)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115618428 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
115618428 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
115618428
NCBI-ProteinID:
XP_030365847
UniProt:
A0A672U560
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Position
21:complement(3258709..3261157)
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AA seq
133 aa
AA seq
DB search
MNYMPGTASLIQDIDKKHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQAKQESEKLKVQALKER
GLCVPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatgcccggcacggccagcctcatccaggacatcgacaagaagcacctggtc
ctgctgcgggacgggcggacgctcatcgggtacctgcgcagcatcgaccagttcgcaaac
ctggtgttgcaccaaaccgtggagcgcatccacgtgggcaagaagtatggggacatccct
cgaggcatctttgttgtgagaggagagaacgttgttctgctgggggaaatagacctggag
aaggagagcgacactcctctgcagcaggtctccatcgaggagatcctggaggagcagcgc
gtggagcagcaggcaaagcaggaatcagagaagctgaaggtgcaggcgctgaaggagcgg
ggcctctgcgtcccgcgggcagacaccctggatgagtactaa
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integrated database retrieval system
