Strigops habroptila (Kakapo): 115618531
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Entry
115618531 CDS
T08851
Symbol
POLB
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
115618531 (POLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shab03400
]
115618531 (POLB)
Enzymes [BR:
shab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
115618531 (POLB)
DNA repair and recombination proteins [BR:
shab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
115618531 (POLB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
115618531 (POLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
DNA_pol_B_thumb
HHH_5
HHH_3
NTP_transf_2
HHH
HHH_2
Cdd1
DUF3900
DUF6932
Motif
Other DBs
NCBI-GeneID:
115618531
NCBI-ProteinID:
XP_030366052
UniProt:
A0A672U122
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All DBs
Position
21:complement(3855317..3865737)
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AA seq
335 aa
AA seq
DB search
MSKRKAPQESPNEGITDFLTELANYERNVNRAIHKYNAYRKAASVISRYPGKIQSGAEAK
KLDGVGAKIAEKIDEFLSTGKLRKLEKIRQDDTSASISLLTRVTGIGPAAARKFVEEGIK
TLEDLRKNEHKLTHHQRIGLKYFEDFEKRIPREEMLQMQEIVLKEVKKLDPNYIATVCGS
FRRGAESSGDMDVLLTHPSFTSESPKQSKLLHQVVEQLEKVHFVTDVLSKGDTKFMGVCQ
LPNKEDGTAYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEMGFTINEYTIRR
LGVTGVAGEALPVECEEDIFDYIQWKYREPKDRSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcggaaggcgccgcaggagagccccaacgagggcatcaccgacttcctcacg
gagctggccaattacgagcgcaacgtgaaccgggccatccataagtacaacgcgtacagg
aaggcagcctcggtcatctctcgctatcccggcaagatacagagcggggccgaagccaag
aagctggatggagtaggtgctaaaatagctgagaagatagatgagttcttatccacggga
aaactgcgcaaactggaaaagattcgacaagatgatacaagtgcatctatcagtctcctg
acacgagttactggcattggtcctgctgctgccaggaagtttgttgaggaaggaattaag
actttagaagatctaaggaaaaatgagcacaagctgacccatcaccagcgaattgggctg
aaatattttgaagattttgagaaaagaatcccaagagaagaaatgttgcaaatgcaggaa
attgtgctgaaagaggtaaagaagctggacccaaactatattgctacagtctgtggcagt
tttagacgaggcgcagagtcaagcggcgatatggatgttctcctgacccacccgagtttc
acatctgaatcacccaaacagtcaaaacttctgcatcaagttgtagaacagctggagaaa
gtccactttgtcacggatgtgctgtctaaaggagacacaaaattcatgggtgtctgtcag
ctgccgaataaagaagatggaacagcctatccacacaggaggattgatatccggcttatc
cccaaagatcagtattactgtggtgtactgtacttcacaggaagtgatatattcaataag
aacatgagaactcatgctctggaaatgggcttcaccatcaatgagtacacaatccgtcgc
ttgggtgtcactggagttgctggggaggccctaccagtcgaatgtgaagaagacatcttc
gactatatccagtggaagtaccgagagccaaaggatcggagtgaataa
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