Strigops habroptila (Kakapo): 115618699
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Entry
115618699 CDS
T08851
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115618699 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shab03021
]
115618699 (SMARCC2)
03036 Chromosome and associated proteins [BR:
shab03036
]
115618699 (SMARCC2)
Transcription machinery [BR:
shab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115618699 (SMARCC2)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115618699 (SMARCC2)
PBAF complex
115618699 (SMARCC2)
GBAF(ncBAF) complex
115618699 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
115618699
NCBI-ProteinID:
XP_030366362
LinkDB
All DBs
Position
23:complement(445143..455009)
Genome browser
AA seq
1191 aa
AA seq
DB search
MAARKKDGGPNVKYYEASDTVSQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLARPNIFLQQEIEPKLLSKLKDIVKRHQGTVTEDKSNASHIVCP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVTDEKSPVTRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYNKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETAGKDEEENGTGSKGEQAKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQSDGDAKTGRKSKELDELVPEPVKGKPELQQSSASQQMLNFPDKSKEK
PADMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVG
SRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRV
ASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEP
ERMEESGAEEARAEAQPAEEKKEAKEPRDGASEEEAKEKPGETPKKEEEKGKEVEGEKEP
DKGDADGAGEPEKEKEAKEGPDEVPKEQAEPEAERKAKVERDIGEGNLSTAAAAALAAAA
VKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLAD
RQAFHMEQLKYAEMRARQQHFQHLQQQQQQQQQPPLPPGAPQPLPGTAGAPLAPAAHPLA
APPAPAMVAPAEPVGPPLPGAPPPQPLPPHAPAPFPGQQPPPPSVAGSLGGSGHPAVPGN
APAAFPFGLPPSAIPLSMANPAPGEPPAFPAANPPALGLHGALASSMPPGGGLPPAPLVG
GSPAAHSPAIVAAVQGSLLPNPGLLADQGPPLQTDPIAPSPSTATPVPPTQ
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggaagaaggacggcggccctaacgtgaagtattacgaggcctcggacacc
gtgagtcagttcgacaacgttcggctttggctcgggaagaactataagaagtacatccaa
gccgagccccccaccaacaagtcgctgtcgagcctcgtggtgcagctcctgcagttccaa
gaggaggtgttcgggaagcacgtcagtaacgcgccgctcactaagctgccgatcaaatgc
ttcctggacttcaaggcggggggtgccctgtgccacatcctggcagcagcctacaagttc
aagagcgaccaaggatggcggcgtttcgatttccagaatccctcgcggatggatcgcaac
gtggagatgttcatgaccatcgagaagtccctggtgcagaacaactgcctggcccggccc
aacatcttcctgcagcaggagatcgagcccaagctcctgagcaagctgaaggacatcgtc
aagaggcaccagggcacagtgaccgaggacaagagcaacgcgtcccacatcgtctgcccc
gtccccggcaacctggaggaagaggagtgggtccggcccgtcatgaagcgcgacaagcag
gtcctgctgcactggggctactaccccgacagctacgacacgtggatccccgccagtgag
attgaagcctcggtggaggatgctccaacaccggagaagccccggaaggtccatgccaag
tggatcctggacacggacaccttcaacgagtggatgaacgaggaggactatgaggtgacg
gacgagaagagccccgtcacccgcaggaagaagatctcagccaagaccctgacagatgag
gtgaacagccccgactcggaccggcgggacaagaagggggggaactacaagaagcgcaag
cgctcgccctccccatcgcccacccccgaggccaagaagaagaacgcaaagaagggaccc
tccaccccctacaacaagtccaagcgcgggcaccgcgaggaggagcaggaggatctgacc
aaggacatggatgagccttcgcccgtccccaacgtggaggaggtcaccctgcccaagaca
gtgaacaccaagaaggactcggagtctgcgcccgtcaaggggggcaccatgacggacctg
gatgagcaggaagacgagagcatggagacagccggaaaggacgaggaggagaacggcacc
gggagcaagggggagcaggccaagaaccccgacctgcacgaggacaacgtgacggagcag
acgcaccacatcatcatccccagctacgccgcctggttcgactacaacagcgtccacgcc
atcgagcgccgagccctgcccgagttcttcaacggcaagaacaaatccaagacccccgag
atctacctggcttaccggaacttcatgatcgacacgtaccggctgaacccgcaggagtac
ctcacctccaccgcctgccgccgcaacctggccggggacgtctgcgccatcatgcgggtc
cacgccttcctggagcaatggggcctcatcaactaccaagtggacgctgagagccggccc
acccccatgggcccccccccgacgtcccacttccacgtgctggccgataccccctcgggg
ctggtgccgctgcagcccaagacaccccagggccggcagagcgacggcgacgccaagacg
ggccgcaagagcaaagagctggacgagctggtgccggagccggtgaaggggaagccggag
ctgcagcagagctcggcctcgcagcagatgctcaacttccccgacaagagcaaggagaag
ccggccgacatgcagaacttcggcctccgcaccgacatgtacaccaagaagaacgtcccc
tccaagagcaaagcggccgccagcgccacgcgggagtggacggagcaggagacgctgctg
ctgctggaggccctggagatgtacaaggatgactggaacaaggtgtcggagcacgtgggc
agccggacgcaggacgagtgtatcctgcacttcctgcgcctgcccatcgaggacccctac
ctggaggactcggaggcgtccctggggcctctggcctaccagcccatccccttcagccag
tccggcaaccccgtcatgagcaccgtggccttcctggcctccgtggtggatccccgcgtg
gcctccgccgctgccaagtcggcgctggaggagttctccaagatgaaggaggaggtgccc
acggcgctggtggaggcccatgtgcgcaaggtggaggaggcggccaaggtgacgggcaag
gccgaccctgccttcgggctggagagcagcggcatcgccggcaccacctcggacgagccc
gagcgcatggaggagagcggcgccgaggaggcgcgggcagaggcgcagccggcggaggag
aagaaggaggcgaaggagccccgcgatggtgccagcgaggaggaggcgaaggagaagccc
ggggagacccccaagaaggaggaggagaaggggaaggaggtggagggcgagaaggagccc
gacaagggtgatgctgacggtgcaggggagccggagaaggagaaggaggcgaaggagggc
ccggatgaggtgcccaaggagcaagcggagcccgaagccgagcgcaaggccaaggtggag
cgggacatcggcgagggcaacctgtccaccgccgccgccgcggcgctggcggccgctgcc
gtgaaggccaagcacttggcagcggtggaggagcggaagatcaagtccttggtggcgctg
ctggtggagacgcagatgaagaagctggagatcaaactgcggcacttcgaggagctggag
accatcatggaccgggagcgcgaggccctggaataccagcggcagcagctcctggccgac
cggcaggcgttccacatggagcagctcaagtacgcggagatgcgggcgcgccagcagcac
ttccagcacctgcagcagcagcagcagcagcagcagcagcccccgctgcccccgggagcc
ccccagcccctgcccggcaccgccggcgccccgctggcccccgccgcgcacccgctggcc
gcgccgcccgcgcccgccatggtggcacccgccgagcccgtggggccgccgctgcccggg
gccccccccccgcagccgctgccgccgcacgccccggcgccgttccccgggcagcagccg
ccccccccgagcgtggccgggagcctgggtggcagcggccaccccgccgtgcccggtaat
gcgcccgcggctttccccttcggattgcctccatccgccatcccattgagcatggctaac
cccgcccccggcgagccccccgccttccccgccgctaacccccccgcgctcgggctgcat
ggggccctggccagcagcatgccgcctgggggggggctgccccccgccccgctcgtgggg
ggctcgccggccgcgcacagccccgccatcgtggccgccgtgcagggaagcctccttccc
aaccccggcctcctcgcagaccaaggcccccccctgcagacggaccccatcgcccccagc
cccagcacggccaccccggtgccccccacgcagtga
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integrated database retrieval system
