Strigops habroptila (Kakapo): 115618805 Help Entry 115618805         CDS       T08851                                  Symbol COL2A1 Name (RefSeq) collagen alpha-1(II) chain   KO K19719   collagen type II alpha Organism shab  Strigops habroptila (Kakapo) Pathway shab04510   Focal adhesion shab04512   ECM-receptor interaction shab04518   Integrin signaling Brite KEGG Orthology (KO) [BR:shab00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115618805 (COL2A1)    04518 Integrin signaling     115618805 (COL2A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     115618805 (COL2A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:shab00536]     115618805 (COL2A1) Glycosaminoglycan binding proteins [BR:shab00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    115618805 (COL2A1) SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd Motif Other DBs NCBI-GeneID:  115618805 NCBI-ProteinID:  XP_030366591 LinkDB All DBs Position 23:complement(2126168..2144328) Genome browser AA seq 1485 aa AA seqDB search MPGRRPLRLAAALAILFLAVVAAQDRDLPEAGSCLQDGQSYSDKDVWKPEPCRICVCDTG TVLCDDIICEELRDCPSPEIPFGECCPICPAEQPSGQPGPKGQKGEPGDIKDVVGPRGPP GPQGPAGEQGQRGDRGEKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQ MAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPSGAPGPQGFQGNPGEPGEPGAAGPMGPR GPPGPPGKPGDDGETGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEA GAPGAKGESGSPGENGSPGPMGPRGLPGERGRPGPSGAAGARGNDGLPGPAGPPGPVGPA GAPGFPGAPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGAPGNPGTDGIPGAKGSA GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQGAP GPAGEEGKRGARGEPGAAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPAGLAGPK GATGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPTGAPGEDGRPGPPGPQGARGQPGVM GFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPS GFQGLPGPPGPPGESGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLP GTPGTDGPKGATGPAGPNGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKD GARGLTGPIGPPGPAGPNGEKGESGPPGPSGAAGARGAPGERGEPGAPGPAGFAGPPGAD GQPGAKGEQGEPGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAA GRVGPPGPNGNPGPPGPPGSAGKDGPKGARGDAGPPGRAGDPGLQGPAGPPGEKGEPGED GPAGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSAGDRGPPGPV GPPGLTGPAGEPGREGNPGSDGPPGRDGAAGVKGDRGETGPVGAPGAPGAPGAPGPVGPT GKQGDRGETGAQGPMGPSGPAGARGMPGPQGPRGDKGETGEAGERGLKGHRGFTGLQGLP GPPGPSGDQGAAGPAGPSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGEPGPAGPP GNPGPPGPPGPPGTGIDMSAFAGLGQPEKGPDPIRYMRADEAGSNLRQHDVEVDATLKAL NNQIESIRSPEGSKKNPARTCRDIKLCHPEWKSGDYWIDPNQGCTLDAIKVFCNMETGET CVYPNPRSIPKKNWWTSKTKDKKHVWFAETINGGFHFSYGDEDLAPNTANIQMTFLRLLS TEGSQNVTYHCKNSIAYMDEETGNLKKAILIQGSNDVEIRAEGNSRFTYSVLEDGCTKHT GKWGKTVIEYRSQKTSRLPIVDIAPMDIGGAEQEFGVDIGPVCFL NT seq 4458 nt NT seq  +upstreamnt  +downstreamnt atgcccggccgccgcccgctccgcctcgccgccgctctcgccatcctcttcctcgccgtt gtcgccgcgcaggaccgagacctccccgaagcaggcagctgcctgcaggacgggcagagc tatagcgataaggacgtgtggaagccggagccgtgccgtatctgcgtgtgcgacacgggg accgtcctctgcgacgacatcatctgcgaggagctgcgggactgccccagccccgaaatc cccttcggagagtgctgccccatatgtcccgctgagcagcccagcgggcaacctggcccc aaggggcagaagggtgaacccggtgacattaaagatgttgtaggaccccgagggcctccg ggaccgcagggccctgcaggcgagcaggggcagcgaggggaccgcggcgagaagggggag aagggtgctcccggtccccggggcagggatggagaacccggcacccctgggaatcccggc ccccccggtccccccggccctcccggcccccctggcctcggcgggaacttcgcggctcag atggccggaggctttgatgagaaggctggaggtgcacagttgggtgtcatgcagggaccc atgggccccatgggaccccgtggcccccccggcccctccggtgctcctggtccccaagga ttccaaggcaaccccggcgagcccggcgagcccggcgctgctggtccgatgggtccccgg ggacccccgggaccccccgggaagcccggcgatgatggtgagactggcaaacccggcaag tctggagagcgtggcccccccggcccccagggtgctcgtggcttccctgggacccccggc ctccccggagtgaaaggccaccggggctaccctggcttggatggtgccaaaggagaggca ggagctcctggagccaagggtgaatccggctcccctggtgagaacggctcccccggcccc atgggtccccgtgggctgcctggagagagaggacgacccggcccctccggcgctgcgggt gctcgtggcaatgacggtctccccggcccggcgggacccccgggacctgtgggcccggcc ggagcccccggcttccccggcgcccccggctccaagggtgaagctggtcccaccggcgca cgagggcccgagggtgcccagggcccccgcggtgaatccggcacccccggctctcccggc cctgccggcgcccctggtaaccccgggactgacggcattcccggcgcgaagggatctgca ggtgctcccggcatcgcaggcgctccaggcttccctggcccccgcggcccgcccggaccc cagggtgccaccggcccgctgggacccaagggacagacgggagaacccggcatcgcgggc ttcaaaggcgagcagggacccaagggcgagacgggacccgcgggaccgcagggtgccccc gggccggcgggtgaggaaggcaagagaggagcccgcggtgaacccggtgctgccggcccc gtgggaccaccaggagagaggggtgctcccggcaaccgcggcttccctgggcaggacggg ctggctggacccaagggtgctccgggcgagcgcggccccgctggcctcgcggggcccaaa ggagccaccggtgaccccgggcgccccggagagcccggcctgcccggagccaggggtctc actggccgcccaggagatgctggtcctcaaggcaaagtcggcccaaccggtgcccccggc gaggacggacgccccggcccccccggcccacagggtgctcgtggccagcccggcgtgatg ggtttccccggtcccaaaggtgctaatggtgagcctggaaaagctggtgagaaaggactc cccggcgccccggggctgcggggtcttcccggcaaggacggtgagacgggagctgccggc cccccgggacctgccggtcccgcaggggagaggggagagcaaggagcccccggtccctcc ggcttccaggggctgcccgggccaccaggtccccccggagagagcggcaaacccggagac cagggtgttcctggggaagctggtgcccccggtctcgtcggtcccagaggtgaacgtggc ttccccggcgaacgtggctctcccggtgcacaagggctgcaaggtccccgtgggctcccc ggcactccgggcaccgacggacccaagggtgccaccggcccagctggccccaacggtgcc cagggtcccccagggctgcaggggatgcccggagagcgcggagcagccgggattgccggt cccaagggagatcggggagacgtcggagagaagggacccgagggagctcctgggaaggac ggtgcacgaggtctgacaggtcccatcggtccccccggccccgctggccccaatggcgag aagggagaatctggcccccccggtccatccggcgctgctggtgcccgcggtgcccctggc gagcgcggggagcccggagcccccggtcccgctggatttgccgggcccccgggcgccgat ggacaacccggagccaaaggggaacagggagagcccgggcagaagggagacgctggtgct cccggtccccaaggtccctccggcgctccgggcccgcagggcccaactggtgtaactggt cccaaaggagcgcggggagctcagggccccccgggagccaccggattcccaggcgctgcc ggtcgagtgggacctcccggcccgaacggtaacccgggcccccccggcccccccggctcc gctggcaaagacggtcccaagggtgctcgtggcgacgcggggccgccgggccgtgccggt gatcccgggctccagggcccggccggtccccccggggagaagggtgagcccggcgaggac ggccccgcgggtcccgacggcccccccggcccccaaggcttggcaggacaacgcggcatc gtcgggcttcccggccagcgaggggagaggggcttccccgggctgccggggccatcgggc gaacctggaaaacaaggagctcccggctctgctggtgaccgcggcccccccggccccgtg ggtccccccggtctgacgggtcctgctggtgaacctggccgcgagggtaaccccggatcc gatggcccccccggccgggacggtgcagccggagtgaagggtgaccgtggcgagaccggc cccgtgggtgctcccggcgctcccggcgctcctggtgctcctggccccgtgggtcccacc ggcaaacagggagacagaggcgagacgggtgcacaaggtcccatgggtccctccggtcct gctggtgctcgaggcatgccgggtccccaagggcctcgcggtgacaagggagagacggga gaggctggagagagagggctgaagggccaccgtggcttcaccgggctgcagggtcttccc ggaccacccggtccttctggagaccaaggtgctgctggtcccgcgggtccctccggcccc aggggtccccccggtcccgtcggtccctctggcaaggacggctccaatggaatgcctggt cccatcggcccccccggcccccgtgggcgaagcggcgaaccgggccctgcgggccccccc gggaaccccggtccccccggtcctcccggccccccaggcaccggcatcgacatgtcagcc ttcgccgggctgggtcagccggagaaagggcccgatcccatccggtacatgcgggcggac gaggcgggcagcaacctgcggcagcacgacgtcgaggtggacgccacgctcaaggccctc aacaaccagatcgagagcatccgcagccccgagggctccaagaagaacccggccaggacc tgccgggacatcaagctttgtcatcccgagtggaagagcggagactactggatcgacccc aaccaaggctgcaccttggacgccatcaaagttttctgcaacatggagacgggtgagacc tgtgtctaccccaaccccagaagcatccccaagaagaactggtggaccagcaagaccaaa gacaagaagcacgtctggttcgcagagaccatcaacggtggcttccactttagctacggt gatgaagacctggctcccaacaccgccaacatccagatgaccttcctccgcctcctgtcc accgaaggctcccagaacgtcacttaccactgcaagaacagcatcgcctacatggacgag gagacgggcaacctgaagaaagccatcctcatccagggctccaacgacgtggagatcaga gccgagggcaacagcaggttcacgtacagcgtcttggaggacggctgcacgaaacacact ggcaaatggggcaagacagtgatcgagtaccggtcacagaagacctcgcgcctgcccatt gtagatattgcacctatggacattggtggagcggagcaggagttcggtgtggatattggc cccgtctgcttcttgtaa

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