Strigops habroptila (Kakapo): 115618847
Help
Entry
115618847 CDS
T08851
Symbol
VARS1
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115618847 (VARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shab01007
]
115618847 (VARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shab03016
]
115618847 (VARS1)
Enzymes [BR:
shab01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
115618847 (VARS1)
Amino acid related enzymes [BR:
shab01007
]
Aminoacyl-tRNA synthetase
Class I (U)
115618847 (VARS1)
Transfer RNA biogenesis [BR:
shab03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
115618847 (VARS1)
Prokaryotic type
115618847 (VARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
tRNA-synt_1g
GST_C
tRNA-synt_1_2
GST_C_2
Anticodon_1
tRNA-synt_1e
Arc1p_N_like
Jag_N
GST_C_3
BrnA_antitoxin
Motif
Other DBs
NCBI-GeneID:
115618847
NCBI-ProteinID:
XP_030366643
LinkDB
All DBs
Position
Unknown
AA seq
1104 aa
AA seq
DB search
MGGRCPPPRWCCWCRPPPADACARRALIAARFAGPPPPALRVVRSGGGPALLTRQGALLR
GAAAAAAFLSPPALLGGRGAAPRALVRQWVAFAERELAPAAAIAAHRGGAPQARARARQE
LLRALRVLDSHLRDRTFLVGDGVTLADVTGTCVLLGPCRRVLDAATVSTIPNVCRWFETC
VGLPQFRAVLGDVGLCADGASDPQLELAPVEVDAEEDDAMGLDAMRQIAMGQPAMGQDAV
EQDAVDQAAMGQPAVGQDAMEQDAVDQAAVDQAAVGQPAVGQAAMGQAAPPPAKSAAQLK
KEAKKREKLEKFQQKQEKIREKQAPAPRRQRRPPGVVTYDLETPPGQKKDVSVPLPPSYS
PRYVEAAWYSWWEREGFFKPEYGRGRVSAPNPRGVFMMCVPPPNVTGALHLGHALTSAIQ
DSLARWQRMRGLTTLWSPGCDHAGIATQVVVERRLWRTRRLTRHQLGRERFLQEVWAWKH
EKGDRIYQQLRQLGASMDWDRACFTMDPKMSRAVCEAFVRLHEQGLIYRSTRMVHWSCAL
RSAISDIEVEKRELPGRTLLRVPGYEEPVEFGVLVAFAYPLEGGEEGQEVVVATTRLETM
LGDVAVAVHPEDPRYTHLRGRSVLHPFTGQRLPVLHDPFVDPQFGTGAVKVTPGHDATDL
DVGQRHGLPCPCVLDDEGRLCGVPPPFLGMPRFRARAAVMEALKERGLFRGVTENPMVVP
ICSRSGDVLEPVQRPQWFLRCSALAAAAAGVVRGGELRLRPPAHTRTWLQWMDNIRDWCI
SRQLWWGHRIPAYFVTIDDPSVPPGKDGDGKFWVSGRTEDEARAKAAKRFRVPPEKVTLR
QDEDVLDTWFSSGLFPFSIFGWPEPSEDLDVFYPGTLLETGHDILFFWVARMVMLGLALT
GRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGISLQGLHEQLENSNLEPAELER
AREGQKRDFPNGIPECGTDALRFALCAYTAQGRDINLDVMRVLGYRHFCNKVWNGARFVL
QALGGGYRPPPDHQVRGRPGLADRWVRSRLSRAVGAVGAAMEEFDFPGATTAVHRFWLYE
LCDVYLVRGRTRGGTGGCGAGGVG
NT seq
3311 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggcgatgcccccccccgcgctggtgctgctggtgccgccccccccccgcggac
gcgtgcgcgcggcgggcgctgatcgcggcgcggttcgcggggccgcccccccccgcgctg
cgcgtggtgcgctccggggggggccccgcgctgctcacccgccagggggcgctgctgcgc
ggcgccgccgccgccgccgccttcctcagcccccccgcgctgctcggggggcggggcgcc
gcgccgcgcgcgctcgtccgccaatgggtggccttcgccgagcgcgagctcgcccccgcc
gccgccatcgccgcgcaccgcgggggggcgccgcaggcgcgggcgcgggcgcggcaggag
ctgctgcgggcgctgcgggtgctggactcgcacctgcgggaccgaacgttcctggtgggc
gacggcgtcaccttggccgacgtgaccgggacgtgcgtgctgctggggccctgccgccgc
gtcctggacgccgccaccgtctccaccatccccaacgtctgccgctggttcgagacctgt
gtggggctgccccagttccgggcggtgctgggagatgtggggctgtgcgcggacggggcc
tctgacccacagctggagctggcacccgtggaggtggacgccgaggaggatgatgccatg
gggctggatgctatgcggcagatcgctatggggcagcccgctatggggcaggatgctgtg
gagcaggatgctgtggatcaggccgctatggggcagcccgctgtggggcaggatgctatg
gagcaggatgcggtggatcaggctgctgtggatcaggccgccgtggggcagcccgctgtg
gggcaggccgctatggggcaggccgccccgcccccagccaagagcgcggcgcagctgaag
aaggaggcgaaaaaacgggagaaactggagaaattccaacagaaacaggaaaagatccgc
gagaagcaggctcctgccccccggcgccagcgccgcccccccggggtggtgacctatgac
ctggagacccccccggggcagaagaaagacgtgtcggtgccgctgcccccctcgtacagc
ccgcggtacgtggaggccgcctggtacagctggtgggagcgcgagggcttcttcaagccc
gagtatgggcggggccgcgtgtcggcgcccaacccgcggggggtgttcatgatgtgcgtc
cccccccccaacgtgacgggcgccctgcacctgggccacgcgctcaccagcgccatccag
gacagcctcgcgcggtggcagcgcatgcgggggctgacgacgctgtggagcccgggctgt
gaccacgccggcatcgccacgcaggtggtggttgagcggcggctctggcgcacgcggcgc
ctcacgcgccaccagctcggccgcgagcgcttcctgcaggaggtgtgggcctggaagcac
gagaagggcgaccgcatctaccagcagctccggcagttgggggcctccatggactgggac
cgggcctgtttcaccatggaccccaagatgagccgcgccgtgtgcgaggccttcgtgcgg
ctgcacgagcaggggctcatctaccgcagcacgcggatggtgcactggagctgcgccctg
cgctccgccatatccgacatcgaggtggagaagcgggagctgccgggccggacgctgctg
cgggtgccgggctatgaggaacccgtcgagtttggggtcctggtggccttcgcctacccc
ctggagggcggcgaggaggggcaggaggtggtggtggccaccacgcggctggagacgatg
ctgggggacgtggcggtggccgtgcaccccgaggacccccgctacacgcacctccggggc
cgttccgtccttcaccccttcacggggcagaggctcccggtgctgcacgaccccttcgtg
gacccccagttcggcaccggcgcagtgaaggtgaccccagggcacgacgccacggacctg
gatgtggggcagcgccacgggctgccctgcccctgcgtgctggacgatgaggggcggctc
tgcggcgtgcccccccccttcctggggatgccgcggttccgggcccgcgccgcggtgatg
gaggcgctgaaggagcgggggctgttccggggggtcaccgagaaccccatggtggtgccc
atctgcagccgctcgggggacgtgctggagccggtgcagcgcccgcagtggttcctgcgt
tgctccgctctggccgcggccgccgcgggggtcgtgcgggggggggagctgcgcctgcgc
cccccggcccacacccgcacctggctgcagtggatggacaacatccgggactggtgcatc
tcccgccagctctggtggggccatcgcatcccggcctacttcgtcaccatcgacgacccc
agcgtgccccccggcaaggacggggatgggaagttctgggtcagcggccgaaccgaggac
gaggctcgagcgaaggcggcgaaacgcttccgggtgccccccgagaaagtgaccctgcgg
caggacgaggacgttctggacacttggttctcctccggcctcttcccattctccatcttc
gggtggcccgaaccaagcgaggacctggacgtgttctacccggggacgctgctggagacg
ggccacgacatcctcttcttctgggtggcgcgaatggtgatgctggggctggcgctgacc
gggcggctgcccttccgcgaggtttacctgcacgccatcgtgcgggacgcgcacggcagg
aagatgagcaaatccctcgggaacgtcatcgaccccctggacgtgatccacggcatctcc
ctgcaggggctgcacgagcagctggagaacagcaacctggagcctgcggagctggagcgg
gcgcgggaggggcagaaacgcgacttccccaacgggatccccgagtgcgggacggacgcg
ctgcgcttcgccctctgcgcctacacggcccagggccgggacatcaacctggacgtgatg
cgggtcctgggttaccggcacttctgtaacaaggtgtggaacggggcccgcttcgtgctg
caggcgctggggggcggctaccggcccccccccgaccaccaggtgcggggccggccgggg
ctggccgatcggtgggtgcggagccgcctgagccgcgccgtgggggccgtgggggccgcg
atggaggagttcgacttccccggcgccacgacggccgtgcaccgcttctggctctacgag
ctctgcgacgtctacctggtgcggggccgcacccgcggggggacgggggggtgtggggcg
gggggtgtggg
DBGET
integrated database retrieval system
