Strigops habroptila (Kakapo): 115618857
Help
Entry
115618857 CDS
T08851
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115618857 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shab03041
]
115618857 (DHX16)
Enzymes [BR:
shab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115618857 (DHX16)
Spliceosome [BR:
shab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
115618857 (DHX16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
WHD_HA2
DEAD
AAA_22
AAA_19
AAA_30
Cas3-like_C_2
nSTAND3
nSTAND_NTPase5
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
115618857
NCBI-ProteinID:
XP_030366655
UniProt:
A0A672TZK0
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MAPPPALPASAATSGGDAPSPPKPPAPRQGPPLRLRTPPEEEPEAEWEASERERLRDLEE
RDAFAERLRRRDRSRTVLTRPDAKAYEVSPKTPQSSRRRSENTGAGGCGRNPAGNTWRSG
SGISWRSWRPRSADEEQPLRGGGAVGPRAPAASTTSAACGTWPASTSRRESGSAWRRAAG
TASPEERRGQVLQAEEAEGGPEERLAPRDEQRRWEEERMEAAALRFGARDAARRRPQPRY
DVLLEDAQMVQFVSAAQLQGARPGTEAAPAVSEAERRRQSVQEQRRSLPIFPYRDELVAA
IAQHQVLVIEGETGSGKTTQIPQYLHEEGYTRQGLKIGITQPRRVAAMSVAARVAVEMGT
KLGNEVGYSIRFEDCTSERTVLKYMTDGMLLREFLTEPDLASYSVLMVDEAHERTLHTDV
LFGLLKDIARFRPQLKVLVASATLDTRRFAAFFDNAPVFRIPGRRFPVDIYYTKAPEADY
LEACVVSVLQIHVTQPPGDILVFLTGQEEIEACVELLQERCRRLGSRLPELLVLPIYANL
PSDMQARIFQPTPPGARKVVVATNIAETSVTIDGIVYVLDPGFCKQKSYSARTGMESLVV
TPCSRASANQRAGRAGRVAPGKCFRLYTAWAFQHELEETPVPEIQRADLGSLVLLLKSLG
INDLIHFDFLDPPPHETLVLALEQLYALGALNHMGELTTLGRRMAELPVEPMLAKMILAS
EQYGCTEEVLTVAAMLSVNNAVFYRPKDKVLHADSARRGFHVPGGDHLVLLNVYNQWVSS
GHSLQWCYEHFVQARSLRRARDVREQLEGLMERVEISPASCGADCGPVRKAITAGFFYHT
ARLTRGGYRTVKHQHSVFIHPNSALFEEQPRWVLYHELVCTTKEFMRQVIEIDSAWLLEV
APHYYQAKELEDGSARKMPKKVGKSREELG
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggctccgcccccggcgcttcccgccagcgccgccacctccggcggcgacgctccgagt
cccccgaagcctccagcccctcgccaaggaccccccctccggctccggaccccccccgag
gaggagccggaagcggaatgggaagcgtcggagcgggaacggctccgggatctggaggaa
cgagatgccttcgccgagcgcctgcggcgccgggatcgctcccgcaccgtcctcacccgc
ccggatgccaaggcctatgaagtaagcccaaaaacgcctcaaagtagccgaagaagatca
gaaaacactggtgccggaggctgcggaagaaatcccgccgggaatacctggcgaagcggg
agcgggataagctggaggagctggaggccgagatctgcggacgaggagcagcctcttcgg
ggaggaggcgctgtcgggccccgagcgccggcggcttccactacaagcgccgcctgcggg
acctggcccgcgagtacaagcaggcgggagagcgggagcgcctggagaagagccgccggt
accgcatccccggaggagcggcgcggccaggtgctgcaggcggaggaggcggaagggggc
ccggaggagcggctggcgccgcgggacgagcagcggcgctgggaggaggagcgcatggag
gcggccgcgctgcgcttcggggcgcgcgacgccgcgcgccgccggccccagccccgctac
gacgtgctgctggaggacgcccagatggtgcagttcgtcagcgccgcccagctgcagggc
gcccggcccggcacggaggcagctccggccgtgtccgaggccgagcggcggcgccagtcg
gtgcaggagcagcgccgcagcctccccatcttcccctaccgcgacgagctggtggccgcc
atcgcccagcaccaggtcctggtcatcgagggcgagacgggctccgggaagaccacccag
atcccgcagtacctgcatgaggagggctacacgcggcaggggctgaagatcggcatcacg
cagccgcggcgcgtggcggccatgagcgtggcggcgcgggtggccgtggagatgggcacc
aagctgggcaatgaggtcgggtacagcatccgcttcgaggactgcacgtcggagcgcacc
gtgctcaagtacatgacggacgggatgctcctgcgggaattcctcaccgagcccgacctc
gcctcctacagcgtgctgatggtggacgaggctcacgagcgcacgctgcacacggacgtg
ctgttcgggctgctgaaggacatcgcgcgcttccggccgcagctgaaggtgctggtggcc
tcggccacgctggacacgcgccgcttcgccgccttcttcgacaacgcgcccgtcttccgc
atccccgggcgccgcttccccgtcgacatctactacaccaaggcgcccgaggccgattac
ctggaggcgtgcgtggtgtcggtgctgcagatccacgtcacccagcccccgggggacatc
ctcgtcttcctcaccggccaggaggagatcgaggcgtgcgtggagctgctgcaggagcgg
tgccggcgcctgggctcgcgcctgcccgagctgctggtgctgcccatttacgccaacctg
ccctcggacatgcaggcgcgcatcttccagcccacccctcccggcgcccgcaaggtggtg
gtggccaccaacatcgcggagacgtcggtgaccatcgacggcatcgtctacgtgctggac
cccggcttctgcaagcagaagagctacagcgcccgcaccggcatggagtccctcgtggtc
accccctgctcccgggcctcagccaaccagcgggcgggccgggcgggccgcgtggccccg
ggcaagtgcttccggctctacacggcctgggccttccagcacgagctggaggagacgccg
gtgcccgagatccagcgcgccgacctgggctccctcgtgctgctgctcaagagcctcggc
atcaacgacctgatccacttcgacttcctggacccgccgccccacgagacgctggtgctg
gcgctggagcagctctacgcgctgggcgccctcaaccacatgggcgagctcaccacgctg
ggccggcgcatggcggagctgcccgtggagcccatgttggccaagatgatcctggcctcg
gagcagtacgggtgcacggaggaggtgctgacggtggcggccatgctctcggtcaacaac
gccgtgttctaccggcccaaggacaaggtgctccacgccgacagcgcccggcgcggcttc
cacgtgcccggcggcgaccacctcgtgctgctcaacgtctacaaccagtgggtgtcgagc
gggcactccctgcagtggtgctacgagcacttcgtgcaggcgcgctccctgcgccgggcg
cgggacgtgcgggagcagctcgaggggctcatggagcgcgtggagatcagccccgcctcc
tgcggcgccgactgcggccccgtgcgcaaggccatcacggccgggttcttctaccacacg
gcgcggctgacgcgcggcgggtaccgcacggtgaagcaccagcactcggtgttcatccac
cccaacagcgccctcttcgaggagcagccgcgctgggtgctctaccacgagctcgtctgc
accaccaaggagttcatgcgccaggtgatcgagatcgacagcgcgtggctgctggaggtg
gccccccattactaccaagccaaggagctggaggacggcagcgcccgcaagatgcccaag
aaggtcgggaagagccgggaagagctgggatga
DBGET
integrated database retrieval system
