Strigops habroptila (Kakapo): 115618866
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Entry
115618866 CDS
T08851
Symbol
TRIM41
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM41
KO
K12017
tripartite motif-containing protein 41 [EC:
2.3.2.27
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shab04121
]
115618866 (TRIM41)
Enzymes [BR:
shab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115618866 (TRIM41)
Ubiquitin system [BR:
shab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115618866 (TRIM41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_2
Nop14
zf-RING_6
zf-RING_5
TRAF3_RING
Methyltrn_RNA_3
zf-RING_10
DUF1664
Motif
Other DBs
NCBI-GeneID:
115618866
NCBI-ProteinID:
XP_030366672
UniProt:
A0A672U2M5
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MAAPSRGCGSRLDPVETLQEEAICAICLDYFVEPVSIGCGHNFCRRCIAQLWGGADGAAP
EEEEDEEEEEEEELEVVEEEEEEEDDEGAEEEEMWSEEEDPALWGDPAEEAGMWGGEGQY
PGEEEEDEDVMEEDVEEEEEEEEEEEEEEEEEEAQPRRLQPFTCPQCRKSFFQRSFRPNL
QLANMVQIIRQLHPHPQRGPGPGPGPAGGAAAAGRCEKHQEPLKLFCEVDEEAICVVCRE
SRGHRHHSVLPLDEVVQDYKNKLQGHLEPLKKKLELVLKQKSSEEEKITELRARMQLEMQ
ELEADFERLHQFVLGEQVALLRQLEERYEALLRRQSGNVRLRQEQSAALRRLLAEAHAKS
RQDGLQLLQDIKGTFIRCENIQFQEPEMVPVDVGKKHRNYFLQDVVMRKMEKVFGKVPRA
AVTLDPATAHPRLSLSLDRRSVRLGERRPEPPDAPKRRAWEFCVLGAPGFSAGRHYWEVE
VGGRKGWALGAAREPPRRKEKAPGAQPEGEIWCVGTAGKRFQALTATEQTFLAPGERPRR
FGVYLDYERGQLCFYNAESMSHIHTFNASFRERIFPFFRILAKGTRIKICA
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccgtcgcggggctgcgggtcgcggctggacccggtggagacgctgcaggag
gaggcgatctgcgccatctgcttggattacttcgtggagccggtgtccatcgggtgcggg
cacaacttctgccgccgctgcatcgcgcagctctgggggggcgcggacggggcggccccg
gaggaggaggaggacgaggaggaggaagaggaggaagagctggaggtggtggaggaggag
gaagaggaggaggacgatgaaggcgccgaggaggaggagatgtggagcgaagaggaggac
cccgcgctctggggggaccccgcggaggaggcggggatgtggggcggggaagggcagtac
ccgggggaggaagaggaggatgaggatgtgatggaggaagacgtcgaggaggaggaggag
gaggaggaagaagaagaggaggaagaggaggaggaagaggctcaaccgcggcgcctccag
ccctttacgtgcccccagtgcaggaaaagcttcttccagcggagcttccgccccaacctg
cagctggccaacatggtgcagatcatccggcagctccacccgcacccgcagcgcggcccc
gggcccggccccggccccgcggggggagccgccgccgccggccgctgcgagaagcaccag
gagccgctgaagctgttctgcgaggtggatgaagaagccatctgcgtggtgtgccgcgag
tcccgcgggcacaggcaccacagcgtgctgcccctcgacgaggtggtgcaggactacaag
aacaagctccagggtcacctggagccgctgaagaagaagctggagctggtgctgaagcag
aaatccagcgaggaggagaagatcacggagctgagggcgcggatgcagctggagatgcag
gagctggaggcggatttcgagcggctgcaccagttcgtgctgggcgagcaggtggcgctg
ctgcggcagctggaggagcgctacgaggcgctgctgcggcgccagagcggcaacgtgcgg
ctgcggcaggagcagagcgcggcgctgcgccgcctgctggccgaggcgcacgccaagagc
cggcaggacgggctgcagctcctgcaggacatcaaaggcaccttcatcagatgtgagaac
atccaattccaggagcccgagatggtgcctgtggacgtgggcaagaaacatcggaattac
ttcctgcaggacgtggtgatgaggaagatggagaaggtcttcggcaaggtcccgcgagcg
gcggtgacgctggacccggccacggcgcacccgcgcctcagcctgtccctggaccggcgc
agcgtgcgcctgggcgagcggcgcccggagcctcccgacgcccccaagcgccgcgcctgg
gaattctgcgtgctgggggcgccgggcttcagcgccgggcgccactactgggaggtggag
gtgggcggcaggaagggctgggcgctgggagccgcgcgggagccgccgcgccgcaaggag
aaggcgccgggagcgcagcccgaaggcgagatctggtgcgtcggcaccgccgggaagcgc
ttccaagcgctcacggccacggagcaaacgttcctggcgccgggagaacggccccgccgc
ttcggggtctacctggactatgagagggggcagctctgcttctacaacgccgagagcatg
agccacatccacaccttcaacgcctccttccgcgagcgcatcttccccttcttccgcatc
ctggccaagggcacccgcatcaagatctgcgcctga
DBGET
integrated database retrieval system
