Strigops habroptila (Kakapo): 115619106
Help
Entry
115619106 CDS
T08851
Name
(RefSeq) transportin-1-like isoform X1
KO
K18752
transportin-1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115619106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115619106
03009 Ribosome biogenesis [BR:
shab03009
]
115619106
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
115619106
Ribosome biogenesis [BR:
shab03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
115619106
Pre-60S particles
115619106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_2
Vac14_Fab1_bd
TOR1L1_N
HEAT_EF3_N
Cnd1
Arm
PDS5
Adaptin_N
CEP104-like_TOG
MMS19_C
RTP1_C1
TPR_TTI1_C
HEAT_DAAF5
Dopey_N
UNC45-central
Motif
Other DBs
NCBI-GeneID:
115619106
NCBI-ProteinID:
XP_030367007
LinkDB
All DBs
Position
W:complement(35702247..35742398)
Genome browser
AA seq
724 aa
AA seq
DB search
MDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDE
EPEVRKNVCRALVMLLEVRMDRLLPHMISIVDYMLQRTQDQDENVALEACEFWLTLAEQP
ICKDVLCRHLTKLIPVLVNGMKYSEIDIILLKGDVEEDEAIPDSEQDIRPRFHRSRTVAQ
QHEEDGIEDGNDDDNDLDDDDDTISDWNLRKCSAAALDVLANVFRDELLPHILPLLKELL
FHPEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSNKKALVRSITCWTLSRYA
HWVVSQPPDTYLKPLMTELLKRILDTNKRVQEAACSAFATLEEEACTELVPYLAYILDTL
VFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPL
LECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLHNAQPDQYEVPDKDFMIVALD
LLSGLAEGLGGNIEQLVACSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCI
ADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKT
LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPS
GVVQDFIFFCDAVASWISPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAA
YYGV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggaccgaccactcaatatcatgatacctaaattcttgcagttcttcaagcacagcagt
ccaaaaataaggtctcatgctgtcgcatgcgtcaatcaatttatcatcagcagaactcaa
gctcttatgttgcacatagattcttttattgagaatctttttgcactggctggtgatgag
gagcctgaagtacgtaaaaatgtttgccgtgctctggtaatgttgctggaagttcgaatg
gatcgcctgcttcctcatatgattagtatagttgattacatgcttcaaaggacccaggac
caagatgaaaatgtggctttggaggcttgtgagttttggctgactttggctgaacagcca
atttgtaaagatgtattatgtcggcatcttactaaactgatacctgtgctggtaaatggt
atgaaatattcagagatcgatattattctgttgaagggggatgttgaagaagatgaagct
attccagacagtgaacaggatataagacctcgatttcatcgttcacggactgtagctcag
caacatgaagaagatggtattgaagatggtaacgatgatgacaatgatcttgatgatgat
gatgatactatttctgactggaatttaaggaaatgttctgctgctgctctagatgtcttg
gctaatgtatttcgtgatgaacttctgccacacatcttgccccttttgaaggagttgctc
ttccatcccgaatgggtagttaaagaatctggtatccttgttcttggagcaattgctgaa
ggctgcatgcagggtatgattccatatcttcctgagctgatccctcaccttattcagtgc
ctctctaacaaaaaggctcttgtgcgctccattacatgttggactcttagtcgctatgca
cactgggtagttagtcaacccccagacacatacttgaagccattaatgactgagttgcta
aagcgtattctggataccaacaagagagtacaagaagctgcctgcagtgcctttgctact
ctagaagaggaggcttgtacagagcttgttccttatcttgcgtatatccttgacactttg
gtcttcgcatttagtaaataccagcataaaaacctgctcattctttatgatgctatagga
actctagcagattctgtaggacatcatctaaataaaccagaatatattcagatgctaatg
cctccattaatccagaagtggaacatgttgaaggatgaagataaagatctcttcccttta
ttagagtgcctgtcgtcagttgctactgccttgcaatctggctttcttccatactgtgaa
cctgtgtaccagcgttgtgtaaatctggtgcagaagactcttgcacaagccatgttgcac
aacgctcagccagaccaatatgaggttccagataaagatttcatgattgtggcccttgat
ttactcagtggtttagctgaaggacttggaggcaacattgaacagctagtggcttgcagc
aatatcctgacactaatgtaccaatgcatgcaggataaaatgcctgaggtacggcagagt
tcttttgcattgttaggtgatctgacaaaggcgtgttttcagcatgttaagccttgcatt
gctgatttcatgcccattttgggaaccaacctaaacccagaattcatttctgtgtgtaac
aatgccacgtgggcaattggagaaatctccatccagatgggtatagagatgcagccttat
attccaatggtgttgcaccagcttgtagaaataattaacagacccaacacaccaaagaca
ttattagagaacacagcaataacaattggtcgtcttggttacgtttgtcctcaagaggtg
gcccccatgctacagcagtttataagaccctggtgcacctctctgcgaaacataagagac
aatgaggaaaaggattcagcattccgtgggatatgtaccatgatctcggtcaaccccagt
ggagtagtccaagactttattttcttttgtgatgctgttgcatcatggattagcccaaaa
gatgatctccgagacatgttctgtaagattcttcatggatttaaaaaccaagttggagat
gagaattggaggcgtttctctgaccagtttcctcttcccttaaaagagcgccttgcagct
tactatggagtttaa
DBGET
integrated database retrieval system
