Strigops habroptila (Kakapo): 115619244
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Entry
115619244 CDS
T08851
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-5-like
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04514
Cell adhesion molecules
shab04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115619244
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115619244
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shab04515
]
115619244
04090 CD molecules [BR:
shab04090
]
115619244
Cell adhesion molecules [BR:
shab04515
]
Cadherins
Major cadherins
115619244
CD molecules [BR:
shab04090
]
Proteins
115619244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Gag_p24
Motif
Other DBs
NCBI-GeneID:
115619244
NCBI-ProteinID:
XP_030367154
LinkDB
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Position
W:complement(9795445..9977098)
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AA seq
1118 aa
AA seq
DB search
MDVTVKIFNSKNWPQLKQTLIEQALAGKPDALITLGKLLALLQLARQDREAWGAAQLYLR
GAALETAPHTTTAAVQTGEPGDGGEDEVEDKSMEEQPETQAFLVTEPEEEPPATGAQGGA
ARTEPPAPPAYPWGELEDVVAHLNEECLKGNATVRGGKSVARLNKECLKGDAAIRGGESR
PNEPKNQTLDPLDALPGMVLRHLDDKELLDLGLKRVGGGDVGPFGARKKERSTPKEQTAW
REWRGGGREMHSDSESENEEATASGAGPPQGSSVEEKKHETPEDLMGELAKTMNMLKAQT
KRQRRALERLGGTPPPVAQPNWNLIAKDCVLSGVTLEAVPAAAPLQAFPVQVGPQGGAMW
TPLDAKLVQALHKAIKEEGLSSETTPMLLDSAYVQPLAPADARQLINYVSLKRDWIWNQM
HIKEDIDTPLPHHVGKITSSVRNNNAKYIIEGEYANTIFKVEETSGDVYAFERLDREKQA
EYELTALIIDRRNNQLLEPPSKFIIKVCDINDNVPMFAQKVFNGSVPEMSPVGTSITKVT
AVDADDPTVAGHATVTYQVIKGDEYFTVNDSGVISTTRADLDRENQSTNEIIIKAKDAPG
SSGDSSTATVIITLTDINDNFPISKHPSFHFKVPENISAGGEVGRVKVEDIDEPQHRNMR
YGFVRGDYRDTFEIVANPFTNEGIIRPKKALDFEKVAEYRFDIEITDPTVDLHYFKSSGS
RSISTVTIEVADIGEPPVFTKLPYEFKVRENDPEIRTFGSVWAHNPDAAKQKIRYLHKKT
DLSSPNGDYIRVSDNGIIQLPKPLDREFSSSYNITVAAQEIFEDGKCYPLPYWKGISIII
RISATDNDEISPRGFFKYSLATEDSNFSLDENYDNTSNITVKYGQFNRELAKIHYLPFII
SGNGDPELSSTNTLVISVSKCNEKGNFTFCEERAKQVGVGIQALVAIFICIFTIIVITLL
ILXKRHKKDLSGLGRNAAEIHEQLVTYDEEGGGEMDTTSYDVSVLNSVCKNGIKPEAVPS
PYAQVQKPPGNVTSGAGEMEIMTKVKKDEADNDRDLLPYDTLHIYGYEGAESIAESLGSL
EPSSSDSDIDYDFLNDWGPRFKMLSELYGSEPNEDFVY
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgacggttaagatatttaattcaaaaaattggccacaacttaagcaaacactg
attgagcaggcactggcgggaaagccagatgccctcatcactttgggaaagttgttggcc
ttattgcaattggctcggcaagatcgggaggcatggggggcggcgcagttatacttacgg
ggagccgcgcttgaaactgcgcctcacactacgacagcggcagtgcagactggcgagcct
ggtgatggtggggaggacgaggtggaggacaagtctatggaggagcagcctgagacgcag
gcatttcttgttactgagcctgaagaggagccccctgcgaccggtgcgcagggaggggcc
gcacggacggagccccccgcgccaccagcatatccgtggggggagttagaggatgttgtg
gcccatcttaacgaggaatgtcttaaagggaacgctacagtcaggggcggcaagtctgta
gcccgtcttaacaaggaatgtcttaaaggggacgctgcaatcaggggcggcgagtctagg
ccgaatgaaccaaagaatcagactctggaccccctagatgcgctcccaggcatggtactg
aggcatctagacgacaaggaattgttagacctgggattgaaacgtgtgggtggcggtgac
gtagggccctttggggcgcggaagaaggaacgcagtaccccaaaggaacaaacggcatgg
cgggaatggcggggaggtgggcgtgaaatgcattctgactctgagtcagaaaatgaggag
gctacggcgagtggcgctggacctcctcagggctcgagtgtcgaggaaaagaagcatgaa
acaccggaggaccttatgggggaacttgccaaaacgatgaatatgctgaaggcacagaca
aagagacagagacgcgccttggagcggctgggcggaaccccgccccctgtggcgcagcca
aattggaacttgattgcgaaagactgtgtgctaagtggcgtaaccctagaagctgtacct
gcggccgcgcctctacaggcgttccctgttcaggttgggccacaaggaggagctatgtgg
acgcccctagacgctaagttggttcaggcccttcacaaggcaataaaagaggaaggtttg
tcgagcgaaaccacacctatgctgctcgactccgcctatgtccagccactagcccctgcc
gacgctaggcagctgataaactatgtgtctctgaagagagactggatatggaaccaaatg
catatcaaagaagatattgatacaccattaccacaccatgttggcaagatcacatcaagt
gtaaggaacaacaatgctaagtatattattgaaggtgaatatgccaacaccatttttaaa
gtggaagaaaccagtggtgatgtatatgcatttgagaggctagacagagaaaagcaagca
gagtatgagctgacagcactcattattgatagaagaaacaaccagttgctggaaccccca
tccaaattcattatcaaggtttgtgatattaatgacaatgtccccatgtttgcacaaaaa
gtattcaatggatctgtcccagaaatgtcaccagtaggaacctcaatcaccaaagtgaca
gctgtagatgctgatgacccaacagttgcaggtcatgccacagttacctaccaagtcatt
aaaggagacgaatacttcacagtcaatgactctggtgtgatttctacaacaagggctgat
ttagacagagagaatcaatcaacaaatgaaattatcattaaagcaaaagatgctccaggg
tcttctggggattcaagtacagccacagtcattatcactttaaccgacatcaatgacaac
ttccccatatccaaacacccatcatttcactttaaagttcctgagaacatttcagcagga
ggagaagttggcagagtcaaagtagaagatattgacgaaccacaacacagaaatatgaga
tacggttttgtcagaggagactacagggacacctttgaaattgtagcaaatccatttaca
aatgaaggaatcattaggccaaagaaggccctggacttcgaaaaagtagcagaatacagg
ttcgacattgaaataactgatcccacagttgatcttcactattttaaatccagtggctct
aggagcatttcaacagtcaccattgaagtcgctgatattggtgagcctcctgtcttcact
aaactaccatatgaatttaaagtaagggaaaatgatccagaaataagaacatttggttca
gtttgggcacacaaccctgacgcagctaaacagaaaatcaggtatttacacaaaaaaaca
gatttgtctagtcctaatggagactatatcagggtatctgataatggaattattcaactt
cccaagcccttggacagagaattcagttcctcatacaacatcactgtagcagctcaagaa
atctttgaagatggtaagtgctatccacttccctattggaaaggaatcagtataatcatc
aggatttcagctactgacaatgatgaaatatcacctagagggttcttcaaatactccctg
gccacagaagatagcaacttctccttggatgagaactacgataacacatctaatatcact
gtcaaatatggacagtttaatcgtgagcttgccaaaatccactacctgcctttcatcatc
tcaggcaatggtgatcctgagctgagcagcacaaatacacttgtcatcagtgtctccaaa
tgtaatgaaaaaggcaacttcactttttgtgaggaaagagctaaacaagttggagttggt
atacaagcactggtggcaatttttatctgtatcttcacaatcattgtaatcacactgcta
attcttnctaagagacacaagaaggatttgagcggtcttgggaggaatgcagcagagatt
cacgagcagctcgtcacttatgacgaagaaggtgggggtgaaatggataccaccagctat
gatgtatctgtactcaactctgtctgcaagaatggtataaagccggaagcagttccctct
ccatatgcacaagtccaaaagcctcctggaaatgtaacttctggtgctggagaaatggaa
attatgaccaaggttaagaaggatgaagcggacaatgacagggatttgctgccatatgac
acacttcacatttatggctatgaaggtgctgagtccattgcagaatctctcggttctttg
gaacccagctcctcagactcagatattgattatgactttctaaatgactggggacccagg
tttaaaatgttatctgagctctatggatcagaaccaaatgaagattttgtgtattaa
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