Strigops habroptila (Kakapo): 115619277
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Entry
115619277 CDS
T08851
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-1-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04371
Apelin signaling pathway
shab04514
Cell adhesion molecules
shab04520
Adherens junction
shab05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
115619277
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115619277
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115619277
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
115619277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shab03036
]
115619277
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shab04515
]
115619277
04090 CD molecules [BR:
shab04090
]
115619277
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
115619277
Cell adhesion molecules [BR:
shab04515
]
Cadherins
Major cadherins
115619277
CD molecules [BR:
shab04090
]
Proteins
115619277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Motif
Other DBs
NCBI-GeneID:
115619277
NCBI-ProteinID:
XP_030367180
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All DBs
Position
W:complement(21197063..21219073)
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AA seq
908 aa
AA seq
DB search
MGTHGAPEGCEAGVGVPGYRGAEGGHSGTASRRDGTGRGDSPAGGKGRHCEAGTVDHWLC
ERAPSCQPGFTVDAFALAVPRDSVAAGWALGRVSFGNCGEQWHAPYLLDNMRFKVSGDGV
VSATWPLQLQQQEISFSVHTWDAAGKKRLARVTLCRWWHHHHRYHNQEQQEDTAPDVLTF
PKPGHDLCWQKRDWVILPINCPENEWEPFPKKLVQLKSNKDKETEVFYSITGQGADTPPP
VGVFTIEQEMGWLEVMKPLDREEIGKYILFSHAMSANGQPVEDPMEIITVTDQNDNQPVF
TKQVFIGYIKENAKLGTPVMTVNAMDADDAINMNNVITGYSILGEEPKSVQQIFTIDLEK
GIISVIGMRLDWETTPNYTLIIQAADQEGNGLTNTATTIVEVTDANDNAPVFDPTMYKGT
VNENEVGVVVTQLHVTDGDMQGSLAWQAVYKIKSRDQDGDFSITTNPKNNDGILKTAKGL
DYETENWYNLVVTVENTITFTVTLLLSTARILVMVRDMNEAPVFVPPVKRVEVMEDLLLG
HQVTSYMAWDPDRDQRQKNTYRMGSDPAEWLAINPENSIVTTAQPLDQESVYTINSTVDS
GPPDATSMGMLLFLLQDTNDNRPMPGPRIFDVCNWQPEEQMLTIIDKDLPPNTYPFXAVL
EHSSGTNWTVGVVGQDLLVLKLVRELEPGEYSIFLKLTASQCKLQVMPVKAQVCDCEGLA
KNCKWXAFITSGLGIPTILGGILVLLILLLPLFTRRRKVVKEPLLPPKDDKWDNVFHYDE
EGGGEEDQDYDLSQLHRGLDACPEVIHNDMIPLLMAAPQYQYRPRPANPDEIRKFIDENL
KVADADPMAPPYDSLLVFDYKGSGLEATSLSSLNSSSSDYDQDYDYLNNWGSRFKKLADL
YSGGEEDD
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgggcacccacggagctcctgaaggctgcgaggctggggtgggggtaccagggtaccgg
ggtgctgagggcgggcacagtggcaccgcctcccgtcgggacgggacggggaggggcgat
tccccggcgggggggaaaggccggcactgtgaggccggcaccgttgaccactggctgtgc
gagcgggcaccgtcctgtcagcctggcttcaccgtggacgcctttgccctcgccgtgccg
cgggatagtgtggcggcaggatgggcgctagggcgagtgagctttgggaactgtggcgag
cagtggcatgccccgtacctcttggacaacatgcgcttcaaggtgagtggggatggtgtc
gtctctgcaacctggcccctgcagctccagcagcaggagatcagcttctccgtccacacc
tgggatgctgcaggcaagaagcgcttggccagggtgaccctgtgcaggtggtggcaccat
caccatcgctaccacaaccaggagcagcaagaggacactgcacccgatgtgctgaccttc
cccaagcctggccacgacctctgttggcagaagagggactgggtcatcctccccatcaac
tgccctgagaatgagtgggagcccttccccaagaagctggtgcagctcaaatctaacaag
gacaaggagaccgaggttttctacagcatcacggggcagggggcagacacaccccccccc
gtgggggtcttcaccatcgagcaggagatggggtggctggaggtgatgaagccactggac
agggaggagattggcaaatatattctcttctcccacgccatgtcggccaacgggcagcct
gtggaggaccccatggagatcatcactgtgacagaccagaatgacaaccagcctgtcttc
accaaacaagtcttcattggctacatcaaggagaatgcaaagctgggcacacccgtgatg
actgtgaacgccatggatgcagatgatgcaatcaacatgaacaatgtcatcaccggctac
tccatcctcggtgaggagcctaagagtgtgcagcagatattcaccatcgaccttgagaag
ggcatcatcagcgtcatcggcatgaggctggactgggagaccactcccaactacacgctg
atcatccaggctgcagaccaggagggcaatggcctgaccaacactgccaccaccatcgtg
gaagtcactgatgccaatgacaatgctcctgtctttgaccccaccatgtacaaggggacg
gtgaatgagaatgaggtgggggtggtggtgacccagctgcacgtgacagatggggacatg
cagggctccctggcctggcaagctgtctacaaaatcaagagcagggaccaggatggtgac
ttcagcatcaccaccaaccccaaaaacaacgatggcatcctgaaaaccgccaagggcctg
gattatgagaccgagaactggtacaaccttgtggtgacggtggagaacaccatcaccttc
actgtgaccctgctgctctccacggccaggatcctggtgatggtcagagacatgaacgaa
gcccctgtctttgtgcccccagtcaagagggtggaggtgatggaggacctgctgctgggg
caccaggtcacctcctacatggcctgggacccagacagggatcagaggcagaaaaacacg
taccgcatgggcagtgatcctgcagagtggcttgccatcaaccctgagaacagcattgtc
accacagcccagcctctggaccaggagtcggtgtacaccatcaacagcactgtggacagt
gggccgccggatgccaccagcatggggatgctgctcttcctcctccaggacacgaacgac
aacaggcccatgccggggccccggatctttgatgtctgcaactggcagcctgaggagcag
atgctgactatcatcgacaaggacctgccccccaacacctaccccttctaggcagtgctg
gagcacagctctggcaccaactggaccgttggggtggttggacaagacctgctggtgctg
aagctggtgagggagctggagccaggggaatacagcatcttcctaaagctgacagccagc
caatgcaagttgcaggtgatgccagtcaaagctcaggtgtgtgactgcgaagggctggcc
aaaaactgcaaatggtgagcattcatcaccagtgggctgggcatccccaccatcctgggg
ggaatcctggtgctgcttatcctgctgctgccgctcttcaccaggcggaggaaggtggtg
aaggagccactgctcccgcccaaggatgacaagtgggacaatgtcttccactatgatgag
gagggtggtggtgaggaggaccaggactatgacctgagtcagctgcaccggggcctggat
gcctgccctgaggtgatccacaacgatatgatccccctgctgatggctgccccccagtac
cagtaccggccccggcctgccaaccctgatgagatcagaaaattcattgatgaaaacctg
aaggtggctgacgcagaccccatggcccccccatacgactccctgctggtgtttgactat
aagggcagtggcttggaggccacctcactcagctccctcaactcctcctcctctgactac
gaccaggactacgactaccttaacaactggggtagccgcttcaagaagctggcagacctc
tacagtggtggggaggaggatgactag
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