Strigops habroptila (Kakapo): 115619361
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Entry
115619361 CDS
T08851
Symbol
ZFR
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shab03041
]
115619361 (ZFR)
Spliceosome [BR:
shab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115619361 (ZFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
115619361
NCBI-ProteinID:
XP_030367296
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All DBs
Position
Z:90128110..90177018
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AA seq
1071 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHSGAAAQYSQQPASGVAYSHPTTVASYT
VHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYPTAHTATDYGYTQRQQ
EAPPPPPPVTTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAAVAAAAQPQPSVAESY
YQTAPKAGYSQGATQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPVAAAATVVP
SYTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQKQAAAAAAAAAATAAWTG
TTFTKKAPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKAS
QNTNNSSTSARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEP
NVVTQATSSTSTSASKPTASASNIATSSSTVNSSVASSAVKILTPTTNTPLNTASNNKTS
STPANIPVKKISTPKINFVGKYRSGNKLQTTGSKLEEMKSAETVKTTPPATVQTQEAKPE
TSAEPVTPTTLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKG
RRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYE
EDMYWRRMEEEQHHWDDRRRIPDGGYPHGPPGPLGLLGVRPGMPPQPQGPAPLRRPDSSD
DRYVMTKHAAIYPTEEELQAVQKIVSITERALKLVSDNMSDHEKSKNKEGDDKKDGSKDR
ALKGVLRVGVLAKGLLLRGDRNVNLVLLCAEKPSKTLLSRIAESLPKQLAVISPEKYDIK
CAVPEAAIILNSCVEPKMQVTITLTSPVIREENMRDGDVTSGMVKDPPDVLDRQKCLDAL
AALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSATGPQS
PGDALRRVFECISSGIILKGGPGLLDPCEKDPFDTLAVMTDQQREDITSSAQFALRLLAF
RQIHKVLGMDPLPQMNQRFNIHNNRKRRRDSDGVDGFEAEGKKDKKDYDNF
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgcccggtagtttcgttcacctatgtgcccagccggctgggagaagat
gccaaaatggccaccggcaactactttggattcacccatagcggggctgctgcccagtat
agccagcagcctgcttcgggtgtagcctactcccatccaactacagttgctagctacact
gtccaccaggctccagttgctgcacacaccgttactgcagcctatgctccagcagcagcc
acagttgcagtggccaggcctgctccagtagctgttgcagctgctgcaacagctgctgca
tatgggggctatcctacagcgcacacagctacagattacggttacacgcagaggcaacaa
gaagctccaccaccaccacctcctgtcactacacagaattaccaggattcctattcctac
gttcggtctactgccccggctgtagcttacgacagcaagcagtactatcaacagccaaca
gcaactgcggcggctgtggctgctgctgcccagcctcagccttcggtagcagagtcgtac
taccagacagctccgaaagcaggatatagccaaggcgcaactcagtatacccaagcccag
caaacacggcaagtgacagctataaaacctgcaacgccaagtccagcaacaactacattt
tctatatatccagtatcttctactgtgcagccagtagcagctgcagctactgtggttcca
tcctatactcaaagtgcgacatacagtacaacagcagttacttactctggtacctcttac
tctggttacgaagctgcagtgtattcagctgcatcgtcctattaccagcaacagcagcag
caacagaaacaggcagcagcagccgctgctgctgcagctgcaacagctgcttggacaggg
accacctttactaaaaaggcaccattccaaaataagcaactgaaaccaaaacaacctccc
aaaccaccccagatccactactgtgatgtttgtaagatcagctgtgctggaccacagact
tacaaagaacacttagaaggccagaaacacaaaaagaaagaagcagcattaaaagcttcc
cagaacaccaataacagcagcacttctgctcgtggaactcagaatcagttgcgctgtgag
ctttgtgatgtatcttgtacaggggcagatgcttatgctgcccatatccgtggagccaag
catcagaaagtagtgaagttgcacacaaaacttggcaagcccattccttcaactgaaccg
aacgtggttacacaagctacttcttcaacatccacatctgcttctaaaccgactgcctct
gcttcaaatatagcaactagcagcagtactgtgaattcctctgttgcatcctctgcagtg
aaaattcttactcccacgacgaacacaccacttaacactgcgtccaacaacaaaacatct
tcaactcctgctaatatacctgtaaagaaaatatctacaccgaaaataaactttgttggc
aagtacagaagtggcaataagcttcagacaacaggaagtaaactggaagaaatgaaatca
gccgaaactgttaaaacaactcctcctgctacagtacaaacacaggaagcgaaaccagaa
acatcagctgagccagtgactcccacaactctcgctgccttgcaaagtgatgtccagcca
gtgggccatgactatgtggaggaggtaagaaatgatgaaggaaaggtgatccgctttcac
tgtaaactttgtgagtgcagttttaatgatcctaatgccaaggagatgcacttaaaaggg
cgacggcacagacttcaatataagaaaaaagtaaacccagacttgcaagtagaagtaaag
cccagtattcgagcaagaaaaattcaagaagagaagatgaggaaacagatgcagaaagaa
gaatactggcgaaggcgagaagaggaagaacgctggaggatggaaatgaggagatatgaa
gaggacatgtactggaggagaatggaggaagagcagcatcactgggatgaccgtcgcaga
ataccagatggaggatatcctcatggtcctccaggacctctaggcctgctgggagttagg
ccaggaatgcctccacagccccaaggaccagctcctcttcgccgccctgactcctctgat
gaccgctatgtgatgaccaaacatgccgctatatatccaacagaggaggaacttcaggca
gtccagaaaattgtttctattactgagcgtgctttgaaacttgtttctgacaacatgtct
gatcatgaaaaaagcaagaacaaagagggagatgacaaaaaggatggcagtaaagacaga
gctttgaaaggagttttacgagtaggcgttttggctaaaggtttgctactccgtggagac
cgaaacgtcaatcttgttttgttgtgcgctgagaagccttcaaagacattacttagtcgt
attgctgaaagccttcccaaacaacttgcagtaataagtcctgagaaatacgatatcaag
tgtgcagtcccagaggcagcaataattttaaattcgtgtgtggaacccaaaatgcaagtt
actatcacactgacatctccagtcattcgggaagagaacatgagggatggagatgtaacc
tcgggtatggtgaaagacccaccggacgtcttggacaggcaaaaatgccttgacgctctg
gctgctctacgccacgctaagtggttccaggctagagctaatggtctgcagtcctgtgtg
attatcatacgtattcttcgtgacctctgtcagcgtgttccaacttggtctgattttcca
agctgggctatggagctgcttgtggaaaaagcaattagcagcgctacagggccacagagt
cctggggatgcactgagaagagtgtttgagtgtatatcttcaggaatcatccttaaaggt
ggtcctggccttctggacccttgtgaaaaagatccgtttgacacacttgctgtaatgaca
gatcagcagcgagaggatattacttcaagtgcacagtttgctctgagactccttgcattc
cgtcaaatacacaaagttttaggaatggatccattaccacagatgaatcaacgcttcaac
atccataataatcgtaaaaggagaagggacagtgatggggttgatggttttgaagcagag
gggaaaaaagacaagaaagattatgataacttttaa
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integrated database retrieval system
