Strigops habroptila (Kakapo): 115619556
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Entry
115619556 CDS
T08851
Symbol
SPG7
Name
(RefSeq) paraplegin isoform X1
KO
K09552
spastic paraplegia 7 [EC:3.4.24.-]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shab01002
]
115619556 (SPG7)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
shab03110
]
115619556 (SPG7)
Peptidases and inhibitors [BR:
shab01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
115619556 (SPG7)
Chaperones and folding catalysts [BR:
shab03110
]
Other chaperones and cochaperones
AAA proteases
115619556 (SPG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
AAA_5
AAA_17
nSTAND3
RuvB_N
AAA_22
TIP49
AAA_16
AAA_2
Mg_chelatase
AAA_28
IstB_IS21
PglZ
TMEM208_SND2
Peptidase_M50B
DUF4491
ABC_tran
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
115619556
NCBI-ProteinID:
XP_030367875
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All DBs
Position
Z:complement(2366883..2397526)
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AA seq
782 aa
AA seq
DB search
MALLLRLLLLRGRCWRRPAPPPAPAWAWARPRAGGAALGAGRGLQSLLPPTYSPPCQGLG
GVLVKRHIIRDPVRLWNLLGSTYWFTTSSCQWSNQKNGGFKKKSPQEDDEDEKRRKKENQ
MHIERLRALLIITLIVLLFRFMLSENREGTNISWNYFVNEMLAKGEVQRIEVVPESDIVE
VYLHPGGTPHGQVNVTLLYTMRVANIDKFEEKLRAVEDELNIDERERIPVSYKHPGFYGN
DVISLIVTLVAVSMLWSIFRLIRVAGRVGGFNAFNQLKMARFTIVDGKSGKGIGFKDVAG
MHEAKMEVKEFVDYLKNPERYLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAM
AGSEFVEVIGGLGAARVRSLFREAQARAPCIVYIDEIDAVGKKRATNISGFANAEEEQTL
NQLLVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRLDRHIFIDLPTLQERREIFEQHL
KGLKLIQDASFYSQHLAELTPGFSGADIANICNEAALHAAREGHKSIDTFNFEYAVERVI
AGTAKRSQILSPEERKVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFAQILPRE
QYLFTKEQLMERMCMALGGRVSEAITFNKVTTGAQDDLKKVTKIAYSMVKQYGMVPSIGQ
VSFPDLDSAPGIGRRPFSQGLQQMMDHEAKVLVAQAYRRTEKLLLENRDKLQTLSNALLE
KEVINYDDIEALIGPPPYGPKKMIAPQSWLQAERDKQDTRDEEMPQQPPNHEEEEEPRLR
PV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgttgctgcggctgctgctgctccgcgggcgctgctggcggcggcctgcccca
ccgcccgccccggcctgggcatgggctcgcccgcgggccggcggcgctgccctcggcgca
ggacgcggcctgcagagccttctgccaccaacatattcccccccatgtcagggtctcggt
ggagtcctggtgaaacgacacataattcgtgatccagtccggctttggaatctcttaggt
agcacgtactggtttactacttcaagctgtcagtggagtaaccagaagaatggagggttc
aaaaagaaatctccacaggaggatgatgaggatgagaaacgcaggaagaaggaaaatcag
atgcatattgaacgtttacgagcgctcctcatcataactctcatagtgctgttgtttcga
ttcatgctcagcgagaacagagaagggaccaacatttcctggaactactttgtgaatgag
atgctggcaaagggggaggtccagagaatcgaagtggtgccagagagtgacattgtggag
gtttatttgcacccaggaggaactccacatggacaagttaatgttaccctgttgtacaca
atgcgggtggcaaacattgacaaatttgaagagaagctgagagctgtggaggatgagctg
aatattgatgagagagagagaatccccgtttcctacaaacatcctggcttttatggaaat
gatgtcatctctctgatagtgacacttgtggctgtgtccatgctgtggagcatcttccgc
ctcattagggttgccggacgagtaggaggatttaacgcctttaaccagttgaaaatggct
cgtttcaccattgtggatgggaagtcagggaaagggattggcttcaaagatgtggcagga
atgcatgaggcaaaaatggaagtcaaggaatttgtggactatttaaagaaccctgagcgc
tacttgcagcttggggctaaagtgcctaagggggccttgttacttggaccaccaggctgt
ggaaagacattgctggcaaaggcagtggctacagaagcacaagtgccatttttggccatg
gcaggctccgagtttgtggaggtgataggaggtcttggagctgccagagtccggagcctc
ttcagagaagcccaggctcgagcgccctgcattgtgtacatcgatgaaattgatgctgtg
ggcaagaagcgcgcaaccaatatatctgggtttgccaatgctgaggaggagcagacctta
aaccagctgctggtggaaatggatggaatggggaccacggatcatgtcatagtgctggct
tccaccaaccgtgctgatgtcttggataatgctttaatgagacccgggagactggacagg
cacatcttcattgatcttccaacactccaggagagaagagagatctttgagcagcacctg
aagggcctcaaattgatccaagatgccagcttctactcacagcaccttgcagaactgacg
ccaggcttcagtggagctgacatagcgaatatatgtaatgaagctgctcttcatgccgct
agagaaggtcataaatccatcgatactttcaactttgagtatgctgtggaaagagtcatt
gcaggcactgccaaaagaagtcaaatcttgtcaccagaagagaggaaggttgtggcgttc
cacgaatcaggccatgcactggttggctggctgctggagcacaccgaggctgtgatgaag
gtttccatagcccctcggacaaacgccgctctcggattcgctcagatccttccaagagag
cagtacctcttcaccaaggaacagctgatggagagaatgtgtatggcactgggagggaga
gtgtctgaggccatcacctttaacaaagtcactacaggagcacaggatgacctgaagaaa
gtgaccaagatagcctactctatggtgaagcagtacggaatggtgcccagcattgggcag
gtctccttcccagacctggatagtgcacctggaattggtcggcgccctttcagccaggga
cttcagcagatgatggaccatgaagcaaaagtcctggtggctcaggcttacaggcgcaca
gaaaaactcttactggagaacagggacaagctacaaacactgtctaatgccctcctggag
aaagaagtgataaattatgatgacattgaagctttaattgggcctccaccctacgggcca
aagaaaatgatagctcctcagagctggcttcaagcagagagagacaagcaagatacaaga
gatgaagaaatgccccagcagccaccaaaccatgaggaagaggaggaaccacgactgaga
ccagtatga
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