Strigops habroptila (Kakapo): 115619740
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Entry
115619740 CDS
T08851
Symbol
PKD1L2
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shab04040
]
115619740 (PKD1L2)
Ion channels [BR:
shab04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115619740 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
REJ
Gal_Lectin
Lectin_C
Ion_trans
GPS
Abhydrolase_9_N
Motif
Other DBs
NCBI-GeneID:
115619740
NCBI-ProteinID:
XP_030368367
LinkDB
All DBs
Position
Z:6372976..6414179
Genome browser
AA seq
2583 aa
AA seq
DB search
MRHLYNRPHNGHCNDLSSTPVCILRHNHHHMLEAICLTFDCSCCCKQQRGRRNADDVTSQ
AFEEGSKKRGDVISEMSAMQGTVLRMWLGITVLISLALCLAVEEATADEGIPCSKYQVAF
NRSCYEFVRLQRTFVGAQSWCERRGGHLVFIENEETQEFLQKHIAEDQEWWIGLISNSLL
NETSEGSMIWLDTSIISYSNWYKDQPSPFSSTCGYILKNAKYQWGVTENCSQEFDFICEF
ESGQSIACDNYNATVQCGSGEVIQIGESFYGRKTPHYCVLEAPLQYDTDEDCSWISVKDE
IAGQCHGLQACQVAADGAFFGDPCPASSSYLSIQYHCKEGLQLVVTDTCFVFENITLSLT
WLLSPYSGNLSCIISTGDGHTIDPYYPLTLVSNVTYRYSSPGEFTVFVECTTSEWHVMAQ
KRVTVLDKMDQLSITGCYSQYESGNSSHCRTLYGELLWIQAELNGGTGVTYTILADNMTL
TQSSAKEGVMPHNLTLDSTSQELLGPGIHQLEIRASSNTTASEISESIAIHLIEPVSGLQ
AAVVSHTLQLGKDLEVNVSVSHGAPDKLKFEVIGSNETHSHKEDGPHREPRMYIIPMHSE
GTFLVKVVAMNAFSNMSLDLGFITVLANSSHKKDSAKDESISETNIQKTNDHRRKNKIYV
KPSRHVDPFTTVTLGWPDKNSNSSFLWSCGACWPAWSKCVQQQKILTNQSEVQIPPSCLP
PPKSAVTVRVTVQNHGNEEGQDEQCLYVTAKQGLQLEIRCEANCKPVNASEDVVLSVSGQ
QDSQAIYYNWYLDNTFQTKPMTLPPACGLTGFWQNSLNLLQSNTSLLRINSSFLQTQGEA
FQIKVTAMTQRGYGEETYLVSTVPPPQIPSCAVSPKQGSVLTTFAVSCSAPCLASSCQSS
HNRQLTYCFYLKPNSLLDCGPDPELFPVYLPLGEEENDFILHMTITVSNVFGDTVQTNAS
VKVGHADMIDGNLTLQAIVSEKANTILKDSNNSMSLFQLYKSVTSILNQETQEESYNISL
QTNTRKELRGLMLTSLSAVNVTSMQTALKMSEVLKEITYKSEELSVSAQVEASNTLKDVS
ASLLTVNTEDSRDDQKLKDAASYLFNAVSNVLKASVGMRAVNTSVPEAEQILFYTLLSPH
NSGNPQSSVSQQLLNTVENLQSALLFGKEPDDEPTVLTTPSATMYTHRLQTENMDRTSIS
ISSSSSARFTLPSASSLGVSGVDDETVDIRMVSFAMNPFFSSDTSFDVSGTVGGLSLTGL
DGLMIPVSNLKENIEVMLPRLSATQEDKILLNLGNFSTFQLNVTSENTSVVIHLESEHDI
PLILYLGYGYHPNETNYDMKNHLFCKKTAGGETNAWVLSPEELIFGEGTYYFMVLQDVGM
DSTAYDRLTIAVTCFASRCVYWDEHQGNWNSYGCHVGPKTNPRSTQCLCNHLTFFGSSFF
VIPNAIDVSKTAQLFGTFVDNPVVVTTVGCVFLIYVLVVIWARRKDIQDDAKVKITVLED
NDPFAQYRYLVTVFTGHRHGAATTSKVTLTLYGLEGESEPHHLIDPDTPVFERGGVDVFL
LCTFFPLGELESIRLWHDNSGDSPSWYVNRVLVHDLACDQKWYFLCNSWLAVDIGECVLD
KVFPVATEQDMKQFSNLFFMKTSKGFQDGHIWYSVFSRSPRSSFTRAQRVSCCFSLLLCT
MLTSIMFWGVPKDPAEQKMDLGKIEFTWQEVMIGFESSLLMFPINLLIVQIFRNVQSRPA
MQGREKKLGKNGRVSPSLPPTPQVNQAVSLTPEALMKDIRRIANSLCKVLKAPSLTSVSD
LGKSTNINTLLALVEDIICQQNRAGQEFYDESKKDDPIIVTLGAMDIQENTRSRTPEKGM
CERLKSSDYNRCLYMQLQHVEMELELLGPHKFQMPQSYTQAVRQVQHMKNLLENRICSSA
SITERLSLTPSSSSDGKKSSSSKGLPWWFVFIAWFLVAATSGVSGFFTMLYGLHYGKENS
IKWLISMAISFLESLFITQPLKVLGFAAFFALVLKKVEHEDEENTAIEGPLAAPGDSHPL
FGARRDSRSNIYLPPPVADVEKMKISCMKEQKAFALIREILAYLGFLWMLLLVAYGQRDP
NSYYLNKHIENSFTDGFHDVYSYQDFFTWANTTLVKNLYGPHKGFITDGNSKLVGSARIR
QVRVKGDTCPISPKLQHIIQECHAPYSIQTEDTSVYGERWNASVVDNSSDLSSAWQYQSQ
SKLRGQPTWGKLAIYRGGGYLIHLGTDPKNASRILQYLFTNVWLDTFTRAVFVEFTVYNA
NVNLFCIVSLMFETNALGAFFTSAELQSVRLYPYTNSLHIFVVAAEVIYFLFIVYYMIVQ
GKLMKTQRWKYYQSKWNLLEMAIILISWSALSVFVKRTILGTRDISYYQEHKEDCVSFNE
TARADAVLGYLIAFLVLLSTVKLWHLLRLNPKLNMITSTLRRAWGDISGFITVIAIMFLA
YSIATNLIFGWKLSSYKTLFDSAETMVSLQLGIFNYEEVLDYNPILGSFLIGSCIIFMTF
VVLNLFISVILVAFSEEQKHYQASEEEEIVDLMLMKLFSFFGIKCKKEETPATNDQLEQP
AND
NT seq
7752 nt
NT seq
+upstream
nt +downstream
nt
atgagacatttatacaacagacctcacaatggccattgcaatgacttatcatcaacacct
gtgtgcatcctcagacacaatcaccatcatatgttagaagcaatctgtttgacgttcgat
tgctcctgttgttgcaaacagcaaagaggaaggagaaatgctgatgacgtgacatctcaa
gcttttgaagaaggcagcaaaaagagaggtgatgtgataagcgagatgagtgccatgcaa
ggcactgtgctgagaatgtggcttgggatcacagttctaatttctcttgctctgtgtttg
gctgtggaggaagcaactgctgatgaaggaatcccttgctcaaagtaccaggtagctttc
aaccgttcatgctatgagtttgttagactccagcgtacctttgtaggcgcccagagctgg
tgtgagagaagaggagggcacctggtctttattgaaaatgaggaaactcaagagttcttg
caaaaacatattgctgaggatcaggaatggtggataggactgatctcaaactccttgctg
aatgaaacttctgaagggtcaatgatttggctggacacttcaattataagctacagtaac
tggtacaaggatcagccatctcccttctcatccacatgtgggtacatcctgaagaatgcg
aagtatcagtggggtgtgactgaaaattgcagccaggaattcgacttcatttgcgagttt
gaatctggccagagcattgcttgtgataattacaatgccactgtacagtgtgggtcagga
gaagttattcaaattggagagagcttctatgggcggaagacccctcactactgtgtattg
gaggctcctctccagtatgatacagatgaagactgtagctggatcagtgtcaaagacgaa
atagcaggccagtgtcatggtcttcaggcctgccaggtggcagcagatggcgctttcttt
ggagatccttgtccagcttccagcagctatttgtccattcaataccactgcaaggaaggt
ctgcagctggttgtaacagatacatgctttgtcttcgaaaatatcacactcagtttgacc
tggctgctctctccatattctggcaacctttcctgcatcattagcactggagatggacac
accattgatccttactaccctctaacactggtcagcaatgtcacgtacagatactcatct
cctggagagtttactgtctttgtggaatgcaccaccagcgaatggcacgtgatggcgcag
aagcgggtgactgttctagataagatggaccaactaagcattaccgggtgctatagccag
tatgaatctgggaacagctctcactgccgtacactgtatggggagttgttgtggattcaa
gctgaactcaatggaggcactggagtgacctacactatattggcagataacatgacactc
actcaatccagtgcaaaggaaggagttatgcctcacaatctgacactcgacagcacctct
caagagctgctaggcccagggatacatcagctggaaatccgagcatccagcaacacaacc
gcatcggagatctctgagagcattgctattcacctgattgagccagtatctggtcttcag
gctgcagtagtttctcacactctgcagctggggaaggatttggaggtgaatgtctctgtg
tctcatggtgccccagataagctgaagtttgaggtgattggatctaatgaaactcactct
cacaaagaagatggccctcacagggaaccgaggatgtacatcattcccatgcactctgaa
ggtaccttcctagtgaaagtggtggccatgaatgctttctcaaacatgagtctggatctt
gggttcatcactgtgttggcaaacagttctcataaaaaagattctgctaaggatgaaagc
atctctgaaacaaacatccaaaagacaaatgatcacagaagaaaaaacaaaatatatgtt
aaaccaagtcgccatgtggatcctttcacaaccgttacactaggatggccagacaagaac
agtaattccagttttctttggtcctgcggagcttgctggcctgcgtggagcaaatgtgtg
cagcaacagaaaatcctaaccaaccaaagtgaggtgcaaatcccaccttcctgccttccg
cctccgaagtcagcggtgactgtcagggttacagtccagaaccatggcaatgaagagggg
caggatgagcaatgtctctatgtgacagcaaaacaaggactgcaactggaaatcaggtgt
gaagcaaactgcaagccagtgaatgcgagtgaggacgttgttttgagtgtctctggacag
caggactctcaggccatatattataactggtatttagataacacattccaaaccaagcct
atgaccctccctccagcctgtggcctgactggtttctggcagaactctttgaatttgctt
caaagcaacacatccttgttgagaataaacagctccttcttgcagacacagggagaagct
tttcagattaaagtaacagcaatgactcagcgtggctacggggaggaaacataccttgtc
agcaccgtgcctccaccccagatccccagttgtgccgtgtctcccaagcagggatcagtg
ctcaccacgttcgcagtctcctgcagtgctccttgcttggcaagttcatgccaatccagt
cacaacaggcagctcacatactgcttctacctgaaaccaaattctctcctggactgtggc
ccggatcctgagctcttcccagtttatcttccacttggagaagaggaaaatgatttcatt
ttacatatgacaattactgttagcaatgtctttggtgatacagttcaaactaatgcttca
gtgaaggttggacatgcagatatgattgatgggaacttgaccctgcaggctattgtatct
gagaaggcaaacaccatcctgaaagatagcaacaacagcatgagtcttttccagctgtat
aaatcagtgacctccatccttaatcaggagacccaagaggaaagctataacatatcttta
cagacaaacacacgaaaagagctccgagggctgatgctgacaagtctctctgctgttaat
gtgacatcaatgcagactgctcttaaaatgtcagaagtattgaaagaaatcacttacaag
agtgaagagctgtctgtctcagcacaagtagaagcgagcaacactctgaaagatgtcagt
gcttccttgctcactgtaaacacagaggacagtagagatgatcagaagctaaaggatgca
gccagttacctatttaacgcggtgagcaatgttcttaaagcttctgtaggaatgagagct
gtcaacacctcagtgccagaggcagaacagatcttattctataccctcctttcccctcat
aattcagggaacccacagagttcagtgtcgcagcagcttctgaatacagttgaaaatcta
cagagtgcccttctgtttggaaaggaaccagatgatgaaccaacagtccttaccactccc
tctgccacaatgtatacacacagattacaaacagaaaacatggatcgcacatccattagc
atctccagttccagctctgccagatttactctcccatctgcttcctcacttggtgtttca
ggagttgatgatgaaacagtggatataaggatggtgagctttgccatgaatccctttttc
tccagtgacaccagttttgacgttagtggaacagtgggaggtctaagtctaactggtctg
gatggcttgatgataccagtcagcaatcttaaagagaacattgaggtaatgttaccaagg
ctttcagcaactcaggaagataagattctgttgaatctgggcaattttagcactttccaa
ctcaatgttacctcagaaaacacatctgtagtgatccatctggaatctgaacatgacatt
ccactaatactctacttagggtatggttatcatccaaatgaaactaactacgatatgaaa
aatcatctgttctgtaagaaaactgctggaggtgagacaaacgcctgggttcttagccca
gaagaactcatttttggagagggaacctactacttcatggttttacaagatgtgggaatg
gattccacagcctatgacaggctaactatagctgtcacttgctttgcatcccgctgtgta
tattgggatgaacaccaggggaactggaacagctatggatgtcacgtgggaccaaaaaca
aatcctagaagcacacagtgcctctgcaaccatctgaccttcttcgggagctcctttttt
gtcatacccaatgccatagatgttagcaaaactgcacagctttttggtacatttgtggac
aaccctgtggtggtgacaaccgtaggatgcgtatttctgatatacgtgcttgtagttatt
tgggctagaaggaaagacatccaggatgatgccaaagtgaaaatcacagtactggaagac
aatgacccctttgctcagtatcgttatcttgtgacagtttttacaggacaccgccatggg
gccgccacaacctccaaggtgactctcaccctctatggactggaaggagagagtgagcca
caccacctaattgatcctgatacaccagtctttgaacgtggaggagtggatgttttccta
ctctgtaccttcttccctcttggggaactagagagtattagattgtggcatgataattca
ggcgacagtccatcctggtacgtgaatcgagtattggtccacgatctggcatgcgatcag
aaatggtacttcctctgtaactcttggctagctgttgatatcggagaatgtgtcctagat
aaagtgttcccggtagctacagaacaggacatgaagcagttcagcaatctgtttttcatg
aagacctccaagggtttccaggacgggcacatctggtactcggttttcagccgctcccca
cgcagctccttcacacgagcccagcgcgtgtcatgttgcttctcactgctactctgcacc
atgctgaccagcatcatgttctggggagtgccaaaggatccagctgagcagaaaatggat
ttgggaaagatcgagttcacatggcaggaagtgatgattggctttgagagctccctcctc
atgttccccatcaacctgctcattgtgcagatcttcaggaacgtacaatcccggccagcc
atgcagggaagagagaaaaagctgggaaagaatggacgagtgtccccaagcctacctccc
accccacaggtcaaccaggctgtctcactcactccagaggctttgatgaaggacataaga
agaattgccaactcactctgtaaagtcctgaaggctccgtctctcacatcagtatcagat
cttggaaaatcaactaacatcaacacacttctggcattggttgaggacatcatctgccag
cagaacagagctgggcaagagttttatgatgagagcaagaaggatgaccctataattgtc
acattaggtgctatggatatacaagaaaacacaagaagccgaactccagagaagggaatg
tgtgagcgactgaaatccagtgattacaatcgctgcttgtacatgcaactccagcatgta
gagatggagctggaattactggggccccataaatttcagatgcctcagagttacacacaa
gctgttcgtcaggttcagcacatgaaaaacctcctggagaaccggatctgctcatcagca
tccatcactgagaggttatcccttactccaagctcctccagtgatggcaagaaaagttct
tcttccaaagggctgccctggtggtttgtgttcattgcttggttccttgttgcagccacc
agtggcgtatctgggttctttaccatgctctatgggctgcattatggcaaggagaactcc
atcaaatggctgatctccatggccatctccttcttggaaagtcttttcatcacacaaccc
ttaaaggttctgggatttgctgctttttttgctctggttctgaagaaggtggaacatgag
gatgaagaaaacacagctattgaagggcctttagctgcaccaggggattcacaccctctc
tttggagcccgacgggacagcagaagcaatatttacctgccacctcctgtggctgatgtg
gagaaaatgaaaatcagctgcatgaaggagcagaaagcatttgccctcatcagagaaatc
ctagcctatctggggtttttatggatgctgttactggttgcctatgggcagagagatccc
aattcctactacttaaacaaacacattgagaacagctttacagatggattccatgatgtc
tacagttatcaggattttttcacatgggcaaacactaccttggtcaaaaatctttatgga
ccacataaaggattcattacagatggcaattccaagctggtgggtagcgctcgaattcgc
caagtaagagtgaaaggagacacctgccctatttctcccaaactccagcatataattcag
gaatgccatgctccgtattccatacaaacagaagatacatcagtttatggggagcgctgg
aacgcttcagtggttgataactcctctgacttgagctcagcatggcagtatcagagtcag
tccaaactgagagggcagcccacctggggcaaacttgccatctacaggggagggggatac
ctgattcacctgggaactgatcctaagaatgcctccagaattctccagtaccttttcacc
aacgtctggctagacaccttcacaagagcagtgtttgttgaatttacagtctacaatgcc
aatgtgaacctgttctgcattgtaagcctgatgtttgaaaccaatgctttaggagccttc
ttcacaagcgcagagctgcaaagtgtccggctttacccatacaccaacagtctccacatc
tttgtggttgcagcagaagtaatttatttcctctttattgtgtactacatgatcgtacag
ggaaaactgatgaagactcaaagatggaaatactaccagagcaagtggaatctcctggag
atggccatcatactgattagttggagtgctctgtcagtatttgtgaagcggacaatcctt
gggacccgagacatcagctactaccaggaacacaaagaggactgtgtaagctttaacgaa
acagcaagagccgatgcagttcttggctacctgattgcgttcctagtgcttctctccaca
gtgaaactgtggcatctcctgaggctcaaccctaagctaaacatgatcacttcaactcta
aggagggcatggggtgatatctctggattcatcactgttattgccatcatgttcctcgcc
tattccattgctacaaacttaatatttggctggaagctctcttcttacaaaactctcttt
gattcagcagagaccatggtcagtcttcagctgggaatcttcaactatgaggaggtcttg
gactacaatccaattttaggctccttcttaattggatcctgcataattttcatgacattt
gtggtgttgaatctgttcatttcggtgattctggttgctttcagtgaggagcagaagcac
taccaggcttcagaagaagaggagattgttgatctaatgctaatgaaacttttcagtttc
ttcgggattaaatgcaagaaggaagagacgccagccactaacgaccaactggaacaacct
gccaacgattaa
DBGET
integrated database retrieval system
