Strigops habroptila (Kakapo): 115619766
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Entry
115619766 CDS
T08851
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shab03036
]
115619766 (TDRD12)
Enzymes [BR:
shab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
115619766 (TDRD12)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Gene silencing
piRNA pathway
115619766 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
Helicase_C
CS
DEAD
Nup_retrotrp_bd
ERCC3_RAD25_C
Helicase_C_2
DUF4715
Motif
Other DBs
NCBI-GeneID:
115619766
NCBI-ProteinID:
XP_030368450
LinkDB
All DBs
Position
Z:complement(12695047..12728422)
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AA seq
1191 aa
AA seq
DB search
MEVFVLKIEDPGCFWVTMKGCGPFVVDEVAYKKLNDEMNQFYDKSYKDVDEVKPVTVEEG
QVCVVFSEELKCWCRAVIKSVMYCTDQYQAECFLVDYAKYIFVKSKDIRVPLEAFMQLPY
RAKKCRLYRTRPVTLRIDLCEETAKIVPAKRWDSAATWYFQNLLKATTHMKAKLCAVEDN
TFDVFLYVMIKDEKVCVNDDLVSKNFARFEEAEGSTRSSTDYQENQTSLNAESLPVKIVS
PTLAFRPVLFQEKIPTDLGTGLAVSSSSVEGTRQRLSADPHENSAPSSQNLSEERNFIFL
SNKIEPSSSLETAPLFHELKKELARKKFLGPNFTESYCWPSVARGCDVVAVSYQGNDPFI
YIPPLLTLLQLESCYKALTNKSGPLALILCPGWKKAQLVFELLKTYERCCRQFHPMLIIL
GQNKAAASSVKIQGCEVIVTTPYSFLRLFEHHNLFCRLCHLVLDEMEVLFSDAAEQVFTI
LDYYKKATVSEEWEYSPHHIIGVGTHWNKHIAHLTKEFMNDPYIMITAMEEASIYGNVQQ
VVQPCVNSERIAVLLKILDFTHSNPQKVLVFTNSVNEADVIHEALKSNSIFSLKIHKESN
SKCILEQWTKKYSSGTPVLLVSTDDCMQSLGITDATCVIHFSFPSPRIFGQRLHSMSDNF
CNVSKSLMDQEHTKARSVILLTENSDCHALGILRFLQHAEAEIPPELHDFTAKMLEAEED
KKFSRPLCAYLKTFGICKNRAACPDRHQINMQMDIPQNIPDKILQAPGYVTILPLHIVSA
TNYFGRIVDKQKDQYTILAEEIKEYFKNPSNKISVKKVKALAFYGLYEKRLFHRVQVVEI
YPKEEENLFFSVKIKYIDEGRTNQVQSCQLLHLPARFQCLPPQAVEFIVCRVKPIDKEIE
WNPEVTHYIHHKIKGKPHEAKIVHTLGNTAWVDQMVRVTRLSELKITANEYNVRSEILST
GLGIDNPEHIMQLQKLCGHLKVLDHTESLESLSIKEDTADPENVFNAQSVSTQENSTENC
NSSNITFRTHPCDGVPQTKEAEEDTTFHHQQCFHPQIKWFQNEETVTVKVEIASVADHKC
EFSKEKVVFSACSGDKFYLADMELHQYILAEKSTCVIKDKEVVIILVKEQKGSWCKLLKN
KNNHVSLDFEHWEDCEDDSPFPAGTKKLYCTGAVSEDLVDSSEVSGTESDD
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggaagtctttgtattaaagattgaagatccaggttgcttttgggttactatgaaagga
tgtgggcctttcgtagtcgatgaagtggcatataaaaaactgaatgatgaaatgaatcag
ttctatgataaatcttacaaagatgtggatgaagtaaagccagtaacagtggaagaaggc
caggtttgcgtggttttcagtgaggaactcaaatgttggtgtagagcagttattaagtca
gtcatgtactgtacagatcagtatcaagcggaatgtttccttgtggattatgcaaaatac
atttttgttaaatcgaaggacattcgagtgcctctggaagcatttatgcagctcccatat
agagcaaaaaagtgtagactgtatcgcacaaggccagtgacgttgcgtatcgacttgtgt
gaagagactgcaaaaattgtaccagccaaacgatgggatagtgctgctacttggtatttt
cagaaccttctcaaagccactactcatatgaaagccaagttatgtgccgtagaagataac
acattcgatgtttttctttatgtgatgataaaagatgaaaaggtatgcgttaatgatgat
cttgtctcaaagaactttgctcgttttgaggaagctgaaggcagtacaaggagttctaca
gattatcaggagaatcaaacatcattaaatgctgagagtcttccagtgaaaattgttagt
cctacgcttgctttcaggccagtgctatttcaggagaagataccaacagatcttggaaca
ggtcttgctgtttccagttcctccgttgaaggcacacgccaaaggttaagcgcagatcca
catgaaaacagtgcgccgagttctcaaaatcttagtgaagaaagaaactttatctttctt
agcaacaaaattgagccatcatcaagtctggaaacagcaccactttttcatgagctcaaa
aaggaacttgctcgaaaaaaatttttaggccctaacttcacagagtcttactgttggcct
tcagtagctcgaggatgtgatgtagttgccgtctcatatcagggaaatgatcctttcata
tatattccaccactacttactttattgcagttggaaagttgctacaaagccttgacaaac
aagagtggaccactagcacttattttatgtcctgggtggaagaaggcacaacttgttttt
gagctgctgaaaacatacgagagatgctgcagacagtttcatccgatgttgataatactt
gggcagaacaaagctgcagctagcagtgtgaaaatacaaggctgtgaagtaatcgtgact
acaccgtatagcttcctgagactgtttgaacatcacaatttattttgtcgactttgccat
cttgttcttgatgagatggaggtgctgttctctgatgctgctgaacaggtttttactata
ttagattattacaagaaagccactgttagtgaagagtgggagtattcaccacatcatatc
attggtgttggaactcattggaataaacacatagcacatttgacaaaggagttcatgaat
gatccttatattatgataacagctatggaagaagcttccatctatggaaatgtgcaacag
gttgtgcaaccttgtgtgaacagtgagagaattgctgtgctactcaaaatactggatttt
acccacagtaatcctcagaaggtgctggtattcactaattcagtaaatgaagcagatgtg
attcatgaggcactgaagagcaactcaatattttccttgaaaatacataaagagagcaat
tccaagtgtatcttagagcaatggacaaaaaagtatagttctggcactcctgttctgtta
gtttcaacagatgactgcatgcagtctttgggaattacagatgcaacttgcgtgatacat
ttcagttttccttctccaagaatctttggtcagcgtctgcacagcatgtctgacaacttc
tgtaatgtgagtaaatctttaatggatcaggaacatacaaaggcaaggtcagtcattttg
ctcacagaaaacagtgactgtcatgcacttgggatcctgcgctttttgcagcacgcggaa
gctgaaattccaccagaactgcatgattttactgccaagatgctagaagctgaagaagat
aagaaattttcaaggccactgtgtgcctatcttaaaacatttgggatttgcaagaataga
gcagcttgtccagatcgtcatcaaattaatatgcaaatggatataccccagaatatacct
gataaaattctacaagcacctggatatgtgacaatattgcctctccacattgtaagtgca
acaaattactttggtcgaatagtagataaacaaaaggatcaatatacaattcttgctgaa
gaaattaaagagtattttaagaatcctagtaacaaaatttctgttaaaaaggtgaaggca
ctagcattttatggattatatgagaaaagactttttcacagggttcaggtggtagagatt
tacccaaaagaggaggaaaatttgttctttagtgtcaaaattaaatacatagatgaaggc
agaacaaatcaagttcagagctgtcagctgcttcacttgcctgcaaggtttcagtgtctc
ccacctcaggctgtggaattcatagtttgtagagtgaaacccattgataaagaaattgaa
tggaacccagaggtaactcattacatacatcacaaaatcaaaggaaaaccacatgaagca
aaaatagtacataccttgggaaatacagcttgggttgaccaaatggtccgtgtaaccagg
ctgtcagagttgaagataacagccaatgaatacaacgttcggtctgagattttgtctacg
ggtctggggattgacaatccagaacatataatgcaacttcagaagttgtgtggacacctg
aaagtattagatcacacagagagcctggagtctttaagcataaaggaggatacggctgac
ccagagaacgtgttcaatgcacagagcgtgtcaacccaagaaaactctactgaaaactgt
aattcttctaatattactttcaggactcatccatgtgatggtgtacctcagactaaggaa
gcagaagaagacactaccttccatcatcagcagtgctttcacccacaaataaagtggttt
caaaatgaagagaccgttacagtgaaggtagaaatagcaagtgtagctgaccataaatgt
gagttctctaaagagaaggtggttttcagtgcttgttcaggagacaaattttatttggct
gacatggagctgcatcagtatatacttgcagaaaagtctacatgtgtgattaaggataaa
gaggttgttattattctcgtgaaagagcaaaaaggatcatggtgcaaattactgaagaac
aagaataatcacgtgtctcttgattttgaacactgggaagattgtgaagatgatagccct
ttcccagctggtactaaaaaactgtactgcactggtgcagtatcagaagatttggttgac
tcctcagaagtcagtggaacagaaagtgatgactaa
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integrated database retrieval system
