Strigops habroptila (Kakapo): 115619861
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Entry
115619861 CDS
T08851
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04137
Mitophagy - animal
shab04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115619861 (AMFR)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115619861 (AMFR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shab04121
]
115619861 (AMFR)
Enzymes [BR:
shab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
115619861 (AMFR)
Ubiquitin system [BR:
shab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115619861 (AMFR)
Multi subunit type E3
ERAD complex
115619861 (AMFR)
LMBR1L-GP78-UBAC2 complex
115619861 (AMFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-C3HC4_4
Prok-RING_4
zf-RING_Vps41
PHD_NSD
zf_RING_Vps8_fungal
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
115619861
NCBI-ProteinID:
XP_030368637
UniProt:
A0A672TYQ8
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All DBs
Position
Z:complement(20194122..20232515)
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AA seq
631 aa
AA seq
DB search
MPLLFLERLPWPSLRTYTALSTLALLGTSLSAYRALSQAPAGAAGSKPPEHQRRGGPRAL
DVAFFLLSDSLCVWVLVNTACCFLMLVAKFIQCMVFGPLRVSERQHLKDKFWNFIFYKFI
FIFGVLNVQTVEEVVMWCLWFSGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHIRVLTLLI
AMLLSCCGLALICGVIGYTHGMHTLAFMAAESLLVTVRTTHVILRYVIHLWDLSHEGMWE
GKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRR
HKNYLRVVGNMEARFAVATPEELAANNDDCAICWDSMQSARKLPCGHFFHNSCLRSWLEQ
DTSCPTCRMSLHITDSHHAREDHQRENMDENLGPVAVAEGRSRLNQHNHFFHFDGSRIAS
WLPSFSVEVMHTTNILGITQTGNSQLNAMAHQIQEMFPQVPYHVILQDLQLTRSVEITTD
NILEGRIQVPFPTQRADSIRPALNSSVERHITDQEDTETVTQSEIVPLELSSRLEEMVEF
NEMEAESSEAEDFEARGSRFSKSADERQRMLVQRKEDLLQQARKRYFNKTLEEERTTGKP
CPKGASADAVTLRRRTLAAAAERRLQMQHNS
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgttgttcctggagcgcttaccctggcccagcctccgcacctacacggcgctc
agcaccctggccctgctgggcactagcctcagcgcctaccgcgccctcagccaggccccc
gccggggctgcgggctccaagccacccgagcaccagcgccgcggcgggccgcgggccctg
gacgtagccttcttcctgctgtcggacagcctgtgtgtctgggtactagtgaacactgcc
tgctgtttcctgatgctggtggctaagttcatccagtgtatggtgttcggtcctctccgt
gtcagcgagaggcagcatctcaaggataaattctggaatttcattttctacaagttcatc
ttcatttttggtgtgctgaatgttcagacagtggaagaagtagtgatgtggtgcctttgg
ttctctgggctcgtgtttcttcatcttatggttcagctctgcaaggatcgctttgaatat
ctttccttttctcctaccacgcccatgagcagccacatcagagtcctgaccctgctcata
gccatgctcctctcctgctgtggattagccctcatctgtggtgttatcggctacactcat
ggcatgcacacgctggctttcatggcagcagagtctctgcttgtgacagttagaaccact
catgtgattttacgatacgtaattcacctctgggatctcagccatgaaggaatgtgggag
ggcaaaggcacttacgtctactacaccgattttgtcatggagctcaccttgctttcactg
gacttgatgcatcacattcatatgctgctgtttggtaatatctggttgtcaatggcgagc
ctcgtgattttcatgcagctacgctacctatttcatgaggttcaacgaagaattcggcgg
cataagaactacctccgtgtggttggaaatatggaagctaggtttgcagttgcaacaccg
gaggagttagcagccaataatgatgactgtgccatttgctgggactccatgcagtctgca
cgcaaactgccttgcgggcacttcttccacaactcgtgcctgcggtcctggctggaacaa
gatacatcttgccccacctgcagaatgtctcttcatatcactgacagccatcatgcaagg
gaggatcaccaaagggaaaatatggatgagaacctgggccctgtggcagtagcagaaggc
agatcacgcttgaaccagcacaatcacttcttccacttcgatggctctcgaattgccagc
tggctgcccagtttttcagtagaagtgatgcacacaacaaacatcctcggtatcacacaa
accggcaactctcagcttaatgctatggcccatcagattcaggagatgttccctcaggtt
ccgtatcatgtaattctacaggatctgcagctaactcgttcagtagagatcaccactgac
aacatcctagaagggcgcatccaggtacctttccccacacagcgtgcagatagcattaga
cctgcattgaacagttctgtggaacggcatattactgatcaggaggatactgaaactgtc
acccagtctgagatagtgccattggaactcagctccagactggaagaaatggtggaattc
aatgaaatggaagcagagtctagtgaagcagaagattttgaggccaggggaagtcgcttc
tcaaagtcagctgatgaaaggcagcgtatgctggttcagcggaaggaggacttgttgcag
caagctcgaaagcgatacttcaacaagaccttggaggaggagcggaccacagggaagccc
tgtcccaaaggagcctcagctgatgctgtgaccctgcgccgcaggacactggctgctgcc
gccgagcggaggcttcagatgcagcacaactcgtag
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