Strigops habroptila (Kakapo): 115619924
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Entry
115619924 CDS
T08851
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shab03036
]
115619924 (DDX4)
Enzymes [BR:
shab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115619924 (DDX4)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Gene silencing
piRNA pathway
115619924 (DDX4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
115619924
NCBI-ProteinID:
XP_030368803
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All DBs
Position
Z:complement(83021982..83046023)
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AA seq
645 aa
AA seq
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MSGYSMNLEDWNAEMGDEASPVLPALEQASFTERPNGPSSGFSPSVGSLGAVGRPNRSQH
MQDHFGGYSRGRGSDESLNRWCQPASTFGSRRNFANRGFQERSAVENSSTQKRGFGRSPG
GLGRSESIKDEQRERPQSGTSFGSRGRGAFGGAAAASKECSEEIGSGRGPKVTYVPPPPP
GDEQAIFAHYQTGINFDKYDENVVEVSGLDPPAPLLAFEEANLCQTLNVNIGKAGYSKLT
PVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPVVAHMMRDGITATSFKEQQEPECIIVA
PTRELINQIFLEARKFVYGTCIRPVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIAR
EKVALHNVKYLVLDEADRMLDMGFGVDMKKLVSHPSMPPKEKRQTLMFSATFPEEVQRLA
AEFLKSDYLFVVVGRVGGACSDVQQNILQVPQYSKRDKLIEILQSIGHERTMVFVDKKKK
ADYIAAFLCQEKIAATSIHGDREQREREVALQDFRSGKCPVLVATSVAARGLDIENVQHV
INFDLPLTIEEYVHRIGRTGRCGNTGKAVCFFDNASDGHLAQSLIKVLSDAQQEVPVWLE
EIAFGFQGERFFMSPNVQKNYRGRGNMDPERMKMSYSGSAQESWD
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggatacagcatgaacttagaagactggaatgcagagatgggggacgaggcatca
ccagtcctcccagctctggagcaggctagcttcactgaaagaccaaatggcccctcctct
ggcttcagtccaagtgtaggctcattgggtgctgttggaagacctaatagaagtcagcat
atgcaggatcattttggagggtattctaggggtagaggtagtgatgaatccctgaacaga
tggtgtcaaccagcaagtacatttggtagcagaaggaattttgccaacagaggttttcaa
gaaaggagtgctgtagaaaattccagtacacaaaagagaggttttggaagatctcctggt
ggccttggacgaagtgagagtattaaagatgagcaaagagaaagacctcagtctggcact
tcgtttggctctagaggaagaggagcatttggaggtgcagcagcagcttccaaagaatgc
agtgaagaaataggatctggaagaggtccgaaggtgacttatgtgccccctcctccacct
ggtgatgaacaagccatctttgcacattaccagacaggaattaattttgacaagtatgat
gaaaatgttgttgaagtgtcaggacttgaccctccagcaccgttactggcttttgaagaa
gctaacctctgtcagactttaaatgtgaacattggtaaagctgggtactctaagcttact
ccagtgcagaagtacagcattcctattatactggcgggacgggatttaatggcatgtgcc
cagacaggatcaggaaaaactgcagcttttcttctaccagttgtggcccacatgatgaga
gatggcataactgccaccagctttaaagaacagcaagaaccggaatgtattattgttgct
ccaactagagaactgataaatcagatctttctagaagcaaggaaattcgtgtatggaact
tgtataaggcctgttgtgatctatggaggtacacaaacaggccattcaatccgtcagata
atgcaaggctgtaatatactgtgtgccactccaggaagacttctagacataattgcaaga
gagaaggttgctttgcataatgtgaaatacttggtgctagatgaagcagaccgcatgctt
gatatgggttttggggtagatatgaagaaactggtttctcacccaagcatgccaccaaaa
gagaaacgtcaaacactaatgtttagtgccacttttcctgaagaagttcagaggctggct
gctgaatttttgaaatcagattatttatttgttgttgttgggcgcgtgggtggagcttgc
agtgatgttcagcaaaatattcttcaggttcctcaatattccaagagagataaactgata
gaaattctgcaaagcataggtcatgaacgaaccatggtgtttgtggacaaaaagaaaaaa
gcagattacattgcagcctttctttgtcaagaaaaaatagctgctactagcatccatgga
gatagagaacagagagagagagaagtagcccttcaggattttcgttctggaaaatgtcca
gttctcgtggcaacttcagtggcagcaagaggtctggatattgaaaatgttcaacatgtt
attaattttgatcttccgttgaccattgaagagtatgtacaccgaattggacgaactggt
cgttgtggaaatactggcaaagcagtttgcttctttgataatgcttcagatggccatctt
gcacaatctctcattaaagtgctttcagatgcccagcaggaagttcctgtttggttggaa
gaaattgcttttggttttcaaggagaaagattctttatgtcacctaatgtgcagaagaat
tacagaggcagaggcaacatggacccagaaagaatgaagatgtcatattctgggagtgca
caggagtcatgggattag
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