Sediminicurvatus halobius: LMH63_00120
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Entry
LMH63_00120 CDS
T09389
Name
(GenBank) hypothetical protein
Organism
shai
Sediminicurvatus halobius
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Cadherin_4
Big_9
Motif
Other DBs
NCBI-ProteinID:
UEX78079
LinkDB
All DBs
Position
complement(28038..34343)
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AA seq
2101 aa
AA seq
DB search
MSRDHVGRPPQPPYPGSAGATSGNDLTGRVVHSANQVIPVLSVDHEGMPGISVSFPGVVG
ISLHTDFSILKTSIDFMPSPVGSAGEVTNSANLFWRGDGTVLAESGTYRVERIDGNVESR
DTDGRITSEDYVRLRATNENGQTINLDGLISEGFGGTADVVIGANGVGRLDAYDVVERST
VLDDLSALLGGEAGEVNAKVVSGLRGEDGTFVRVTAFPEAAGPAIGGHPVEDILLGESGP
AGTRIWYHESGRRVQVPEPDMSPWSNNGAFRPAAVSEFDRPEHDVDEKPEKRPSAAGGAA
APGGHSEGADTLAPGLGKHPAGAAHSSAALREPNADNSNGAEDSAPQAPDAETDRAAPPL
TGNLLLGAGGLSLGLVHGDAGTGLDGLARFAEPVNGGLGDGLRVGADLFRLDRALDLGDD
WRAASYGVDLAGDSAAWLADGTESAFAGQLKGAGDALGAVAGLANLDEALDAGNYVSVVD
GIGNAAGWAGSALGNAGLEAFSGTLQEFVPYAGLFSNIAEGNGFGVITSAVGAVNPVAGM
VLSVAGSVLGGLLGDDDPPPPPEAYAAIAVDETGRYYVADAGDAYGGNGGAMAVAAQQVA
NVMNAAVAATGGRLLAPEDIPSVRIGYDGDGLYGPGGHVDSLDEALGRVAQRMLGQVPIE
GGEVYAKRALYGELADGGALDLDALESALAAGRRFSAVQRQRAEVEALAGDVDVAVELEA
LADGARNVDELSAEAQRLLAATEVESAAQALALGRPHRFDHASRLTDALERAGVDLDGVA
VTDLVMAIDHGRLVAAVADPDRPEAAVGGLPHAAIDWYAADRGAATLHLPDGGDWNLADL
VARLGLADGAGTRAVADAFPGGAAVGTDGDDVLSAGSSGDELIGMAGDDRLRGGAGADRL
AGGAGADVLDGGAGQDTVVYTRSDDGVHVDLATGAARGGDAWGDRLHGIENVEGSRHSDV
LQGSMDDNRLATGAGDDHAHGAAGHDTLLGEAGEDLLAGGTGDDRIAGGHGNDHLYGESG
DDALLGGSGDDVLIGGGGSNIIAGGGGQDTAAYAGDFGDYRVTLAGEGEASVVGPAGTED
RLSGVERLRFNDRILQLQSDGNWTSVPSAARRLGGRPAESSVGWGEAAALGILASFALQR
PATASGRDWRPESPSDQGAGPPAAPKTIQQPPAAAEPGAAIGENIRGKPSHAADAPSNGS
DGAPGASLPGVAIIPPADPAQRETTAAGDSERPPAIAGLAPELRSAEGTAPREERQPHAV
EDPEPLPPDVLRWEGTNGDDVIRGSDIRDIMLGRGGDDRLYGRKADDRLEGGPGADWLEG
GSGADTLRGGAGDDWLRGGTGSDTLRGGGGDDILSGGGGDDTLAGGPGADVLSGGAGDDR
LVVDADDDAELVEGGSGTDTVILDGVWRGDVRGFQGVERIQGGAGDDEVTASTRFLHVDL
GDGQDSLALPGLSVFAAALRFGPESGSAVVEDAEGAKLAVTAETLVLDEGEVHLDGRNND
PFTRDDRLTGEEDAWLRFDPQRLAANDLDLDAGDATRVAAVGGVDIALTRALDHRYWDPD
YAEAQANALAADGGSWRVRRGGPGDDELAAGDGRELFLGAGGERDTVVLDGRREDYRLEA
AGDRVEVTRLDSGATDRLYGIQGLRFTDGSVFVGEADVRRGVLEVTGDGARFRGDRDWFG
ETSIRYSAADGHGGRAAGQLHVDLAPVNDSPSLYREVDYDGNYRHVTVRSPAWDREHNQA
EAGYFTAEGSGRLLGIDVEDTGGGLDLSGELHYELASQPAFGEVSVASDGRFSYRLNQGD
DAGRWVAQEYTYIDRDGGDTRTGTATRWVWQPPEDPVPAGEKHRVETVRFDVRVTDSQGG
TAESTVTIENSPPRGGGKKPLALDLDGDGLEFTDIDDSGIEADINGDGWLERMAWIGADD
ALLTLDRDGDGRVSGFEEISFVDDHPRARTDMEGLALAFDTDGDGDLDRDDAAWDRFALW
QDGDGDGIEDPGERIELAHAGIRRIGVISDGEAERLGDVTVFGRSRFQTADGDGGVVGDV
AFHYAGKAPTTTADELSAVAVLRAAQAAAATSSREAPPPPVAEGVVVADEPLADQPLQLV
G
NT seq
6306 nt
NT seq
+upstream
nt +downstream
nt
atgagcagagatcacgtcggccggccgccgcagcccccttaccccggtagcgcaggagcc
accagcggcaacgatctgaccggtagggtcgttcactcggcgaatcaagtgattccggtc
cttagcgttgaccatgaaggaatgcccgggatttctgtgtcttttccgggtgtggtcggg
atttcactgcatactgatttctcaattcttaagacatccattgatttcatgccgtcgccg
gttggtagcgctggcgaggtgaccaatagcgcgaacctgttctggcggggggacggtact
gtactcgcggaaagcggtacctaccgagttgagcgcattgatggcaacgtggaatcaagg
gacacggacgggcgaatcacctcggaagactatgtaaggctgagggcgaccaacgagaac
gggcagacaatcaatctggacgggctgatcagcgaggggttcggcggcacggctgatgtc
gtgatcggagcgaacggggtgggccgcctggacgcctatgatgtcgttgagcgctcgacc
gtgcttgatgacctctcggcgctattgggcggtgaagcgggcgaggtgaacgccaaggtg
gtctccggtctgcggggggaggacggcacgttcgtccgggtgacggcttttccggaagcg
gctggtcccgcgatcggcgggcacccggtggaggacatcctgctcggcgagtcggggccg
gccgggacccggatctggtatcacgaatccggtcgaagagttcaggtacccgagccagac
atgtcgccgtggtcaaacaatggcgccttccgcccggccgcggtaagcgagtttgatcgc
cctgagcacgatgttgacgaaaagcctgagaagcggccaagcgctgccgggggggccgcg
gcaccgggggggcactccgaaggcgctgatacgctcgccccgggcctcggcaagcacccg
gccggtgcggcgcacagcagcgcggcgcttcgcgaaccgaacgctgataactccaatggc
gccgaggacagcgcaccccaggccccggatgccgagaccgacagggcggcgcctccgctc
acgggaaaccttctcctcggggccggcggcctgagcctggggctggtccacggcgacgcc
ggcacgggcctcgacgggcttgcccgctttgcggagccggtcaacggcgggctcggagac
ggtctccgtgtgggcgccgaccttttccgcctcgaccgcgccctcgacctcggcgacgat
tggagggcggccagctacggcgtggacctcgctggcgactctgccgcctggctggccgac
ggcaccgaatccgcgttcgctgggcagctgaagggcgctggcgacgcgctcggcgcggtg
gctgggctggcgaatctggacgaggcgctggacgccggcaactacgtatcggtggtggac
ggaatcggcaacgccgccggctgggcgggttcagcgctggggaatgcggggctcgaggcg
ttctccggaacgctgcaggagttcgtgccctacgccgggctcttctcgaatattgccgag
ggcaatggcttcggcgtcatcaccagcgccgtcggcgcagtgaatcccgtcgccggcatg
gtgctctccgtggcggggagcgtgctcggcggcctgctcggggatgacgacccgccgccc
ccgcccgaggcctacgcagcaatcgccgtggatgaaaccggtcgctactacgtggccgat
gccggcgacgcctacggcggcaatggcggggccatggcggtggcggcacagcaggtggcc
aatgtcatgaatgcggccgtggcggccaccggcggccgcctgctggcgccggaggacatt
ccgtccgtgcgcatcggctatgacggtgacggcctctacggccccggtgggcatgtggat
tccctggacgaggcacttggccgtgtggcgcagcgcatgctcggccaggtgccgatcgag
ggtggggaggtctacgcgaagcgcgccctctacggcgagctcgccgatggcggcgccctc
gatctggacgcgctcgagtcggccttggcggccgggaggcgattcagcgccgttcagagg
cagcgcgccgaggtagaagccctggcgggcgatgtggacgtcgcggtggagctcgaggcg
cttgctgacggcgcccgcaacgtggacgagctgtcggccgaggcgcagcggctgctcgcg
gcgacggaggttgagagcgcggcgcaggcactggctctggggcgaccccaccgcttcgac
cacgcctcgcggctgacggacgcgctggagcgggcgggcgtggacctcgacggtgtcgcg
gtgactgacctggtgatggcgatcgatcacggccgcctggtggcagcggttgcagatccg
gaccgcccggaagccgccgtgggcgggctgccccatgcggccatcgactggtatgcagcg
gatcgtggagcggcaacgctccatctgcccgatggcggcgactggaacctcgccgatctc
gtggcgcggctcgggctcgcggacggggcgggcacgcgcgccgtcgcggacgcttttccg
ggcggtgcagccgtcggtaccgacggcgatgacgttctctccgctggatcctctggagat
gagctgatcggcatggccggcgatgaccggctgcgcggtggcgcgggcgccgatcgtctc
gccggcggcgccggagccgatgtcctggacggcggcgccgggcaggatacggtcgtctac
acccgaagcgacgatggcgtgcacgtggatctcgctacgggcgctgcccggggcggcgac
gcctggggcgatcgcctccacggcatcgaaaacgtcgaggggagccgccattccgacgtt
ctgcagggaagcatggacgataaccgcctcgcgaccggcgccggggatgaccacgcccat
ggcgccgcggggcatgacaccctccttggcgaggccggtgaggacctgctcgccggcggc
accggcgatgaccgaatcgcaggcggtcatggtaatgaccacctttacggcgaatccggt
gatgacgcgctcctgggtggttccggtgacgacgtgctcatcggcggcggtggcagcaat
atcatcgcgggtggcggcggccaggataccgccgcctacgccggggactttggcgattac
cgcgtgaccctggccggggaaggcgaggccagcgtggtcgggccggcgggcacggaagac
cgtctctccggcgtcgagcggctacgctttaacgaccgcattctgcaacttcagtcggat
ggcaactggacatccgtcccgtccgcggcacgccgccttggcgggcggccggcagagagc
agtgtcggctggggcgaggcagccgcgctcgggatcttggccagtttcgccctgcagcgt
ccggcaacggcctccggtcgggactggcgtccagagtcgccgtcggaccagggtgcgggg
ccgccggcggccccgaagacgattcagcagccgccagcagcagctgagccgggagcggcg
atcggggagaacatccgcggcaagccatcgcatgccgcggacgctcccagtaacggcagt
gatggtgcgcccggagcatcccttcctggcgttgcgatcatcccacccgccgacccagcc
cagcgggaaaccaccgccgccggtgacagtgaacggccgccagcgatagccggcctggcc
cccgaactgcgatccgctgagggcaccgctccgcgggaagagcggcagcctcacgccgtc
gaggaccccgagccgcttccgcccgacgtgctgcgctgggaggggacgaacggcgacgat
gtaattcgcggcagtgacattcgcgacatcatgctcggccggggaggcgacgaccgcctc
tacggccgcaaggcagacgatcgtctggaaggcggcccgggcgcggactggctcgagggc
ggcagcggtgcggataccctgcgcggcggggcgggtgacgactggctgcggggtggtacc
ggatcggacactctccgcggcggcgggggcgacgacattctctccggcggtggcggcgac
gacacgctggctggcggaccgggcgccgacgtcctgtcgggcggcgccggggatgaccgg
ctggtggtcgatgccgacgatgacgccgagctggtcgagggcggcagcggcacggacacc
gtgatcctcgacggcgtgtggcgtggggatgtgcggggcttccagggcgtggaacggatc
cagggcggcgccggcgacgatgaggtcaccgccagcacgcgtttcctgcacgtcgacctg
ggtgacggtcaggacagtctggcgctcccaggcctcagcgtctttgccgctgcgctccgc
ttcgggccggagtcgggcagcgccgtggtcgaggacgcggaaggcgcgaaactcgccgtg
acggccgagacgctggtgcttgacgagggtgaggtgcatctcgacggccgcaacaacgac
ccgttcacccgggacgaccggctcacgggcgaggaggatgcgtggttgcggttcgacccg
cagcgcctcgccgcgaacgacctcgacctcgatgccggcgatgcgactcgcgttgccgcc
gtgggaggagtcgacatcgcgctgacccgcgcgctcgaccaccgctactgggatccggac
tacgccgaggcgcaagcgaacgcactggctgccgatggcggctcgtggcgggttaggcgc
ggcggacccggggacgacgagcttgccgcgggtgacgggcgcgagctcttcctcggcgca
ggcggcgagcgcgacaccgtcgtgctcgacggccgccgcgaggactatcggctcgaggcg
gccggagaccgcgtcgaggttacccggctcgacagcggcgccacagaccgtctgtacggc
attcagggcctgcgcttcacggacggctccgtattcgtcggtgaggcggacgtgcgccgc
ggcgtgctcgaagtcaccggagacggcgcgcgcttccggggagaccgtgactggttcggg
gagacgagcattcgctactcggcagcggatggtcatggcggacgcgctgcaggccagctg
catgtggacctcgcgcccgtcaacgacagcccctccctgtatcgggaggtcgactacgac
gggaactaccgccacgtcacggtgcggtccccggcctgggaccgggaacataaccaggca
gaggcgggatacttcaccgccgaagggtctggtcgcctgctcggcatcgacgtcgaggac
acaggcggcggcctcgacctgtccggcgaactgcactacgagctcgcgtcccagccggcc
ttcggcgaggtgagcgtggcctccgacgggcgcttcagctatcggctaaatcagggcgac
gacgcaggccgctgggttgcgcaggagtacacctacatcgaccgcgatggcggcgatacg
cgcaccgggaccgcgacccgttgggtctggcagccccccgaggacccggtgcccgccggc
gagaagcaccgggttgagaccgtgcgcttcgacgttcgggttacggactcacaggggggc
accgccgagagcacggtaacgatagagaacagccctccacgcggaggcggcaagaagccc
ctggcgctggacctcgatggcgacggcctggagtttacggacattgacgactctgggatc
gaggccgacatcaacggcgacggctggctcgagcgaatggcctggatcggagcggacgac
gccctgctgaccctggaccgggacggcgacggccgcgtctccggattcgaagagatcagc
ttcgtcgacgaccaccctagggcgcgcaccgacatggaggggctggcgctggcattcgac
accgatggcgacggcgatctcgaccgcgacgacgccgcctgggatcgcttcgccctctgg
caggatggcgatggcgacggcatcgaggaccctggcgagcggatcgagctggcgcacgcc
ggtattcggcgaatcggcgtgatatcggacggcgaagccgagcgcctgggcgatgtcacg
gtgttcggccgcagccgcttccagacggccgacggcgatggtggcgtcgtgggggacgtg
gccttccactatgccgggaaggcgccgacgacgaccgccgatgagctctcggcggttgcc
gttctgcgggccgcgcaggcggcggccgccacctcttcccgggaggcgcccccgccgccc
gtcgccgagggcgtcgtagtggcagacgaacccttggcggaccaaccgcttcagctcgtc
ggttag
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