Sediminicurvatus halobius: LMH63_00145
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Entry
LMH63_00145 CDS
T09389
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
shai
Sediminicurvatus halobius
Pathway
shai00300
Lysine biosynthesis
shai00470
D-Amino acid metabolism
shai01100
Metabolic pathways
shai01110
Biosynthesis of secondary metabolites
shai01120
Microbial metabolism in diverse environments
shai01230
Biosynthesis of amino acids
Module
shai_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
shai00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LMH63_00145 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LMH63_00145 (lysA)
Enzymes [BR:
shai01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LMH63_00145 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Lipase_GDSL_2
Motif
Other DBs
NCBI-ProteinID:
UEX78084
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All DBs
Position
38584..39822
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AA seq
412 aa
AA seq
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MSFERRDGRLYAEDVPLEDLAARFGTPLYVYSRAAIESAWQAYAAAFAEREHLICYAVKA
NGNLAVLATLARLGSGFDIVSQGELERVLAAGGDPARTVFSGVGKGEAEMARALEVGILA
FNVESEGELHRLDAVARRLGQRAPVSLRVNPDVDAETHPYISTGLRENKFGIDIARAEAV
YREAVTLPGIRVTGVDFHIGSQLTRIAPLAEALERTLGLVDRLAAAGIPLAHIDVGGGLG
IRYRDEDPPAPAALAEALAPALAGRPQRLLLEPGRALVGDAGVLLTRVEYLKHDHRDFAI
VDAGMNDLLRPALYDAWQAIEPVRERRGRSRCYDVVGPVCESADFLGRGRELAIAPGDVL
AVRSAGAYGFVMSSQYNARRRAAEVLVDGGRAELVRARESWEDLWRGERIPG
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgagcgccgggacgggcgactatatgccgaggacgtgccgctcgaggatctc
gctgcgcgcttcggcacgccgctgtatgtctactcgcgggcggccattgagtcggcctgg
caggcctacgccgcggccttcgccgagcgcgagcatctgatctgctacgcggtgaaggcg
aacggcaatctggccgtgctggcgacgctggcgcggctcggcagcggcttcgacatcgtc
tcccagggcgagctggagcgggtgctggccgccggcggcgacccggcgcgcaccgtgttc
tccggggtcggcaagggcgaggcggagatggcgcgggcgctggaggtgggtatcctcgcc
ttcaacgtcgagtccgagggcgagctgcatcgcctggatgcggtggcacggcggctgggg
cagcgggcgccggtgtcgctgcgggtcaacccggacgtggacgccgagacccatccctac
atctccaccgggctcagggagaacaaattcggcatcgacatcgcccgtgccgaggcggtg
taccgggaggcggtgacgctgcccggcattcgggtcaccggggtggacttccatatcggc
tcgcagctcacccggatcgcgccgttggcggaggccctggagcggaccctgggcctggta
gatcggctggcggctgcgggcattccgctcgcccacatcgacgtcggcggcgggctcggc
atccgctaccgcgacgaggatccaccggcccccgcggcgctggcggaggcgctagcgccc
gctctggccggacggccgcagcggctgctcctggagccaggccgggccctggtgggcgac
gccggcgttctgctcacgcgagtggaatacctcaagcacgaccatcgcgacttcgccatc
gtggacgcgggcatgaacgacctgctccgccccgccctctatgacgcctggcaggccatc
gagccggtgcgcgagcggcgcggccgcagccgttgctacgacgtcgtcggcccggtctgc
gagagcgcggacttcctcggccgcgggcgtgagctcgccattgccccgggggacgtgctc
gccgtgcgcagtgccggggcctacggattcgtgatgagctcgcagtacaacgcccgccgg
cgggcagccgaggtgctggtggacggcggacgggcggagctggtgcgggcgcgggagtcc
tgggaggatctctggcgcggggagcgcatcccggggtga
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