Sediminicurvatus halobius: LMH63_00920
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Entry
LMH63_00920 CDS
T09389
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
shai
Sediminicurvatus halobius
Pathway
shai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMH63_00920 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shai03019
]
LMH63_00920 (groL)
03110 Chaperones and folding catalysts [BR:
shai03110
]
LMH63_00920 (groL)
03029 Mitochondrial biogenesis [BR:
shai03029
]
LMH63_00920 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shai04147
]
LMH63_00920 (groL)
Enzymes [BR:
shai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LMH63_00920 (groL)
Messenger RNA biogenesis [BR:
shai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LMH63_00920 (groL)
Chaperones and folding catalysts [BR:
shai03110
]
Heat shock proteins
HSP60 / Chaperonin
LMH63_00920 (groL)
Mitochondrial biogenesis [BR:
shai03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LMH63_00920 (groL)
Exosome [BR:
shai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LMH63_00920 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LMH63_00920 (groL)
Exosomal proteins of breast cancer cells
LMH63_00920 (groL)
Exosomal proteins of colorectal cancer cells
LMH63_00920 (groL)
Exosomal proteins of bladder cancer cells
LMH63_00920 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_scaffold
AKNA
Motif
Other DBs
NCBI-ProteinID:
UEX78235
LinkDB
All DBs
Position
198090..199736
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVRFAEDARHRMVAGVNVLANAVKVTLGPRGRNVVLEKSFGAPTVTKDGVSVAKEI
ELKDKFENMGAQMVKEVASQTSDAAGDGTTTATVLAQAILREGMKAVAAGMNPMDLKRGV
DKGVTAAVEELKKLSKPCDTDKAIAQVGAISANSDTAIGEIIADAMKKVGKEGVITVEEG
TGLENELDVVEGMQFDRGYLSPYFINNQQSMAAELEDPYILLCDKKISNIRELLPLLESV
AKSSRPLLLVAEDIEGEALATLVVNSIRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEVGLTLEKATLDDLGTAKKVNVSKEETTIVNGGGRADEIKGRVEQIRKQIEDATSDY
DREKLQERVAKLAGGVAVIKVGAGSEIEMKEKKARVEDALHATRAAVEEGIVPGGGVALV
RALKGLDGVKGDNEDQNVGISIVRRALEEPLRQIVYNCGEDSSVVVNKVRDGEGNFGYNA
QTEEYGDLVEMGILDPTKVTRTALQNAASVAGLMITTEAMIAEHPKDDDDSAGGGMGDMG
GMGGMGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaagatgtacgtttcgccgaggacgcccgtcatcgcatggtcgcgggcgtc
aacgtgctcgccaacgcggtgaaggtcaccctcggcccgcgcggccgcaacgtggtgctg
gagaagtccttcggtgccccgaccgtgaccaaggacggcgtctccgtcgccaaggagatc
gagctcaaggacaagttcgagaacatgggcgcgcagatggtgaaggaggtggcctcgcag
acctccgacgcggccggtgacggcaccaccaccgccaccgtgctcgcccaggccatcctg
cgcgagggcatgaaggcggtcgccgccggcatgaacccgatggacctgaagcgcggcgtg
gacaagggcgtcaccgcggccgtggaggagctgaagaagctctccaagccctgtgacacc
gacaaggccatcgcccaggtgggcgccatctccgccaactccgacaccgccatcggcgag
atcatcgccgacgcgatgaagaaggtgggcaaggaaggcgtcatcaccgtcgaggagggc
accggcctcgagaacgagctggatgtcgtcgagggcatgcagttcgatcgcggatacctg
agcccctacttcatcaacaaccagcagagcatggccgccgagctggaggacccctacatc
ctgctctgcgacaagaagatctcgaacatccgggagcttctgccgctgctggagagcgtg
gccaagtccagccgcccgctgctgctggtggccgaggacatcgagggcgaggccctggcg
acgctggtggtcaacagcatccgcggcatcgtcaaggtcgccgccgtgaaggcgcccggc
ttcggtgaccgccgcaaggccatgctgcaggacatcgccgtcctcaccggcggcacggtg
atttccgaggaagtgggtctcaccctcgagaaggcgacgctggacgaccttggcaccgcc
aagaaggtgaacgtctccaaggaagagaccaccatcgtcaacggcggcggccgggccgac
gagatcaagggtcgcgtcgagcagatccgcaagcagatcgaggacgccacctccgactac
gaccgcgagaagctccaggagcgggtcgccaagctcgccggcggtgtcgcggtgatcaag
gtcggcgccggttccgagatcgagatgaaggagaagaaggcccgcgtcgaggacgccctg
cacgccacccgtgcggcggtcgaggagggcatcgtccccggcggcggcgtggcgctggtc
cgtgcgctcaagggccttgacggcgtgaagggcgacaacgaggaccagaacgtcggcatc
agcatcgtccggcgcgccctcgaggagccgctgcggcagatcgtgtacaactgcggcgag
gattcctcggtggtcgtgaacaaggttcgcgacggcgagggcaacttcggctacaacgcc
cagaccgaggagtacggcgacctggtcgagatgggtatcctcgacccgaccaaggtcacc
cgtaccgcgctgcagaacgcggcctccgtcgccggcctcatgatcaccaccgaggcgatg
atcgccgagcatccgaaggatgacgacgacagcgccggcggtggcatgggcgacatgggc
ggcatgggcggcatgggcatgatgtaa
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