Sediminicurvatus halobius: LMH63_02555
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Entry
LMH63_02555 CDS
T09389
Name
(GenBank) deoxyribodipyrimidine photo-lyase/cryptochrome family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
shai
Sediminicurvatus halobius
Brite
KEGG Orthology (KO) [BR:
shai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shai03400
]
LMH63_02555
Enzymes [BR:
shai01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LMH63_02555
DNA repair and recombination proteins [BR:
shai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LMH63_02555
Prokaryotic type
LMH63_02555
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UEX78543
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Position
550998..552530
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AA seq
510 aa
AA seq
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MSAVQVVWFKRDLRVADHAPLAAAAQCGPVLPLYVVEPGYWAQPDTAERHWAFIRESLTS
LDEALRRLGLALHLAEGAVTDVLARLHAAHGIAAVHAHEETGNAWSYARDRAVRAWCREQ
GVALHETPQFGVVRGLDDRDRWAGLWEARMRQPVITPPAEAVAAPVAPGLTVETLPRRLG
VGRTPCPQRQAGGRAAGERLLAGFLAERGEDYRRGMSSPASAEQVCSRLSPHIAYGTLSL
REVVQAHRRRWAAARAGAPRSRWAQSLKSFESRLHWHCHFIQKLEDEPDIEFRNLHRGYD
GLREDDFGPERFAAWAQGRTGLPFVDACMRMLAATGWINFRMRAMLVAVSSYHLWLHWRE
PALHLARLFTDYEPGIHYCQVQMQSGTTGINTLRIYNPVKQSRDQDPQGEFIRRWVPELD
ALPAEWIHEPWQLPASLQQRYGVRIGRDYPEPVVDHQAAAREARRRIRGHRASRDMRPES
QRIRQRHASRSPSPRRPKRPAAPGQGRLKL
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgtgcaggtggtctggttcaagcgcgatctgcgggtggcggaccatgcgccg
ctggcggcggccgcccaatgcggcccggtgctgccgctgtacgtggtggagccgggctac
tgggcgcagccggatacggccgagcggcactgggcgttcatccgggagagcctcacctcg
ctggacgaggcgctgcggcggctggggctggcgctccatctcgccgagggcgcggtgacg
gacgtgctggcccgcctccacgcggcacacggcatcgccgccgtgcatgcccatgaggag
accggcaatgcctggagctacgcccgcgaccgggcggttcgcgcctggtgccgcgagcag
ggggtggcgttgcacgagacaccgcagttcggcgtggtgcgggggctcgacgaccgcgac
cgctgggccggtctctgggaggcacgcatgcgccagcccgtgatcacgccgccagccgag
gcggtggctgcgccggtggcaccgggcctgacggtcgagacgctgccgcgacggctcggt
gtcggacgcacgccctgcccgcagcgacaggcgggcggccgcgcggcaggcgagcggctg
ctcgcgggcttcctcgccgagcgcggcgaggactaccgccgcggcatgtccagccccgcc
agcgccgagcaggtctgcagccggctctcgccgcatatcgcctacggcacgctgtccctg
cgcgaggtcgtgcaggcccatcgccggcgctgggcggcggcccgggccggcgcgccgcgc
tcgcgctgggcgcagtcgctgaaatcgttcgagtcccggctgcactggcactgccacttc
atccagaagctcgaggacgagccggacatcgagttccgcaacctgcaccggggctacgac
gggctgcgcgaggacgacttcggcccggagcgcttcgccgcctgggcccaggggcgcacg
ggcctgcccttcgtcgacgcctgcatgcgcatgctcgccgccaccggctggatcaacttc
cgcatgcgcgccatgctggtggccgtctccagctatcacctctggctgcactggcgcgag
ccggcgctgcacctggcgcggctgttcacggactacgagccgggcatccactactgccag
gtgcagatgcagtccggcaccaccggcatcaataccctgcgcatctacaatccggtgaag
cagtcccgggatcaggacccgcagggggagttcatccgccggtgggtgccggagctcgac
gcgctgccggcggagtggatccacgagccctggcagctgccggcgagcctgcagcagcgc
tacggggtgcgcatcggccgcgactatccggagccggtggtggaccaccaggccgccgcc
cgcgaggcccggcggcggatacgcgggcaccgggcgagccgggacatgcgccccgagtca
caacgcatccgccagcgccacgccagccgcagccccagcccccgccgccccaagcgcccc
gccgcgcccggccagggccgcctgaagctgtaa
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