Sediminicurvatus halobius: LMH63_03080
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Entry
LMH63_03080 CDS
T09389
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
shai
Sediminicurvatus halobius
Pathway
shai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LMH63_03080 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shai03400
]
LMH63_03080 (ruvB)
Enzymes [BR:
shai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LMH63_03080 (ruvB)
DNA repair and recombination proteins [BR:
shai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMH63_03080 (ruvB)
RecFOR pathway proteins
LMH63_03080 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
Mg_chelatase
AAA_3
TIP49
nSTAND3
AAA_22
Rad17
AAA_14
AAA_24
AAA_18
NTPase_1
RNA_helicase
AAA_17
NACHT
Resolvase
AAA_33
TsaE
IstB_IS21
NB-ARC
Parvo_NS1
ABC_tran
AAA_28
TniB
Bac_DnaA
Sigma54_activ_2
bpMoxR
DUF87
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
UEX78643
LinkDB
All DBs
Position
complement(665161..666204)
Genome browser
AA seq
347 aa
AA seq
DB search
MIENDRIVSGEASGEDEAVDRAIRPRRLADYVGQAAVREQLEIFVHAARGRGEAMDHVLV
FGPPGLGKTTLAHIIAHELGVNLRQTSGPVIDRPGDLAALLTNLEPGDVLFVDEIHRLSP
VVEEVLYPAMEDCKIDILVGEGPAARSIKLDLPPFTLVGATTRAGLLTSPLRDRFGIVQR
LEYYSVEELTAIVERSASLLALAIDAGGAGEIARRSRGTPRIANRLLRRVRDYAEVRADG
RISLEVARAAMDLLKVDDNGFDMQDRRLLLAILEKFDGGPVGVESLAAAIGEERGTIEDV
IEPFLIQQGYLHRTPRGRMATRNAYLHFGRTPPPRGNEVLPDLFADD
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagaacgaccgcatcgtcagcggtgaggccagcggcgaggacgaggccgtcgac
cgggccatccggccgcgccggctggccgactacgtcggccaggccgcggtccgggagcag
ctcgagatcttcgtccacgccgcgcgcgggcgcggcgaggccatggatcacgtgctggtc
ttcggcccccctggcctcggcaagaccaccctcgcccacatcatcgcccacgagctcggc
gtgaacctgcgccagacctcgggcccggtgatcgaccgcccgggggatctcgccgccctg
ctcaccaacctcgagcccggcgacgtgctcttcgtcgacgagatccaccgcctctcgccg
gtggtggaggaggtcctctacccggccatggaggactgcaagatcgacatcctcgtcggc
gagggcccggcggcgcgctccatcaagctcgacctgccgccgttcaccctggtgggcgcc
accacccgcgccggcctgctgacctcgcccctgcgggaccgcttcggcatcgtgcagcgg
ctggagtactactcggtggaggagctcaccgccatcgtcgagcgctcggcgagcctgctc
gcgctggccatcgacgccggcggcgccggcgagatcgcacgccgctcccgcggcactccg
cgcatcgccaaccggctgctgcgccgggtgcgcgattacgccgaggtgcgcgccgacggg
cgcatcagcctggaagtggcccgtgccgccatggacctgctcaaggtggacgacaacggc
ttcgacatgcaggaccggcgcctgctgctggccatcctggagaagttcgacggcgggccg
gtgggcgtggagagcctggccgcggccatcggcgaggagcgcggcaccatcgaggacgtc
atcgagccgttcctgatccagcagggctatctgcaccgcaccccgcgcgggcgcatggcg
acgcgcaacgcctatctgcacttcggccgcacgcccccgccgcggggcaacgaggtgctc
ccggacctgttcgcggacgactga
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