Sediminicurvatus halobius: LMH63_03655
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Entry
LMH63_03655 CDS
T09389
Name
(GenBank) PAS domain-containing protein
KO
K13924
two-component system, chemotaxis family, CheB/CheR fusion protein [EC:
2.1.1.80
3.1.1.61
]
Organism
shai
Sediminicurvatus halobius
Pathway
shai02020
Two-component system
shai02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
shai00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LMH63_03655
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
LMH63_03655
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
shai02022
]
LMH63_03655
02035 Bacterial motility proteins [BR:
shai02035
]
LMH63_03655
Enzymes [BR:
shai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.80 protein-glutamate O-methyltransferase
LMH63_03655
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.61 protein-glutamate methylesterase
LMH63_03655
Two-component system [BR:
shai02022
]
CheA family
CheA-CheYBV (chemotaxis)
LMH63_03655
Bacterial motility proteins [BR:
shai02035
]
Flagellar system
Chemotaxis proteins
Two component system proteins
LMH63_03655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CheB_methylest
CheR
PAS_4
PAS_9
HATPase_c
PAS
HisKA
PAS_8
Response_reg
PAS_3
CheR_N
PAS_10
WEMBL
HATPase_c_2
Fez1
DUF745
HpHbR
Fusion_gly
TSNAXIP1_N
HMMR_N
STAT_alpha
DUF3584
Filament
ENOX1
DUF948
IFT57
Golgin_A5
ATG14
HPTransfase
Methyltransf_25
DUF3450
Sec8_N
Spc7
Seryl_tRNA_N
Rootletin
EXOC6_Sec15_N
CCDC93_CC
DUF1664
HAUS-augmin3
TPR_MLP1_2
Motif
Other DBs
NCBI-ProteinID:
UEX78752
LinkDB
All DBs
Position
794799..799619
Genome browser
AA seq
1606 aa
AA seq
DB search
MSDDHRALVPVLQPPGDALWVVALGASAGGLEALKALLAAVEPAHDLAFVVVQHLSPDHE
TLLGQLLARETRLRVQTAEDGGAPAGGHVYITPANRHITLEAGRLRLAEAPRAPTPKPSI
DRFLDSLARECHEHAVAVILSGTGSDGSAGVRAIKAAGGAVFVQDPESAKYDGMPRSALG
TGCADRVGAPARIARFIQRLQAMPPGSELDPDAEDGPLGQVLRVVQSRTGMDLSAYKPST
LRRRLHRRLAATESRDLKDYLTRLQRSEAEARALGREVLISVTRFFRDAQAFEALRTALA
ASLRERGDGQPLRIWVPGCATGEEAYSIAFLAVELMGGTAQAQRLRIFATDLDGEAVTRA
RGGLYPDSALAELSEELVARCFEWRGGARRVRRDIRDLITFARHDLLADPPFHRIDLISC
RNLLIYFSEEAKRRACRRFHYALREGGLLFLGRAETPPVPDLFESVDDRARLYRCRGGAL
AGPLEAGSTLGPGGETAPAAAAGVHRQAPRAAPLEQSVLRAAAHTYAPPGLLVDDGLRIL
HFLGDSSPFVSLPEGQPSFGARELLRPALRTEFVMVATRARRTGEREVSRVIAEAGAGGE
NVRLVATPCGEAGGGHVLVFFESADTPAVAADPPDAEGGGSTISTLEYELADTRGALETV
KGEYEVTTEELQSTNEELQSANEELQSANEELQTSNEELQATNEELTTVNEELNQKSAEL
ESAWQALDNVRNSLADALVVVDRGLRVMLWNPAAEEVFHWSDDPTGSDLTGIPRAVNLPH
FRRDLQRVLASGEPVEREVRGRQRRNREARIWRLRLLPYLDARQSIAGVIVTLVEVTALR
AAEASRQESEQRLASILRQASVAVVLRDRWRRYVYVNEAFSQAFGAEAPPPESEQPPPGL
DGETAAALDALDAEVRAGRTVAERELATPAGERHFLFEAFPVSAGEGGAEWVCALGVEIT
QRRRNEARIRLQAAALEAASFGISVVDCRQPDQPLSYVNHSFERMTGYPRSEILGRNCRF
LQGAETDPDHRARLREAIAAGQSCEVRILNYRRDGAPFWNEVSLSPVRDDSGRVTHYVGI
QNDITAEIHARESLARSRERQRKALEFAGVGNFEWQPGPDRVTGSPRFWELFGLSGSEAR
PLPALLGRLGSSPRRVLEQRLHEALDTGEEIDERLQVIASGGGQRWLRLQARIDRDDREG
PRVLGLVADVTLEREIETAMAEARRTAEAASRAKSQFLSSMSHELRTPLNAVLGFSELLL
EEDREAPLAEAQRESVEHIRQAGDHLLRLVSEILDLARIESGRLALSLVPVSLAEALTES
VQMIRPAAEEAALTLDIAEAPAGLRVQADPTRLQQVLLNLLSNAVKYNRRGGRLAVTLRE
EPGRVGVAVTDTGEGIAPEDQWRVFEPFDRLGRDREAIEGTGIGLVVARRLLEGMGGELS
MESVPGEGSTFTAWLVSVTALLPEDAGSAPILAEARLPPCRLLCIEDQPANRALLRQWAH
SRPAVTLVEAADGAEGLREAREQGPDAILLDLHLPGASGWEVLRQLRADAATRDIPVLAV
TADVREDREEATHRAGFDGFLGKPFQFRELERLLADLLGSCGKAAG
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgacgaccatcgggcgctggtcccagtgctgcaaccgcccggcgacgcgctctgg
gtcgtcgccctgggcgcctccgccggcgggctggaggcgctcaaggcgctgctggcggca
gtggagcccgcgcacgatcttgccttcgtcgtggtccagcacctctcgccggatcacgag
acgctgctcgggcagctgctcgcacgcgagacccgcctgcgcgtgcagaccgccgaggac
ggcggggcgcctgccggcggccacgtctacattacccccgccaaccgccatatcaccctg
gaggccgggcggctgcgcctcgcggaggcgccccgggccccgaccccgaaaccctccatc
gaccgcttcctggacagcctcgcccgcgagtgccacgagcatgcggtggcggtgatcctc
tccggtaccggttccgacggctccgccggtgtgcgcgccatcaaggccgccggcggggcg
gtattcgtgcaggatccggagtcggccaagtacgatggcatgccgcgctcggcgctcggc
accggctgcgccgaccgggtcggcgcgccggcgcggattgcgcgtttcatccagcggctc
caggcgatgccgccgggcagcgagctggatccggacgcggaagacggccccctcggtcag
gttctgcgggtcgtccagagccgcaccggcatggacctctcggcgtacaagccgagcacc
ctgcgccggcgcctgcaccggcggctcgccgccaccgagagccgcgacctgaaggactac
ctgacgcgactgcagcgctccgaggccgaggcccgggcgctgggccgcgaggtgctgatc
agcgtgacccgcttcttccgcgatgcccaggccttcgaggccctgcgcacggcgctggct
gcttcgctgcgcgagcgcggcgacggccagccgctgcgcatctgggtgccgggctgcgcc
accggcgaggaggcctattccatcgccttcctggccgtggagctcatgggcggtaccgcc
caggcacagcgcctgcgcatcttcgccaccgatctcgacggcgaggcggtgacccgcgcc
cgcggcgggctgtatccggactcggcgctggcagagctctccgaggagctggtggcgcgc
tgcttcgagtggcgcggcggcgcgcggcgcgtgcgccgggacatccgcgacctcatcacc
ttcgcccgccacgacctgctggcggacccgccctttcaccgcatcgacctcatctcctgc
cgcaacctactgatctacttcagcgaggaggccaagcgtcgggcctgccgccgctttcac
tacgccctgcgggagggggggctgctcttcctcggccgcgcggagacgccgccggtgccg
gacctgttcgagtccgttgacgatcgcgcccgcctctatcgctgtcgcggcggggcgctc
gccgggccgctggaagcgggtagtacccttggccccggcggcgagacggcgccggcagcg
gcagcgggcgtccaccgccaggcgccgcgggccgcacccctggagcagtccgtcctgcgg
gccgccgcccacacctatgcaccgccggggctgctggtggacgacggcctgcgcatcctg
cacttcctcggcgacagctcgccttttgtgagtctgcccgaggggcagccgtcgttcggc
gcccgcgagctgctgcgcccggcgctgcgcacggagttcgtgatggtggcgacccgcgcg
cggcggaccggcgagcgcgaggtgagccgcgttattgccgaggcgggggccggcggcgag
aacgtgcggctggtcgcaacgccctgcggcgaggctggcggcgggcacgtgctggtgttc
ttcgagtccgcggatacgccggcggtggcggcggacccaccggacgccgagggtggcggc
agcaccatcagcaccctcgagtacgagcttgccgacacccggggcgcgctggagacggtc
aagggcgagtacgaggtcactaccgaggagctccagtccaccaatgaggagctgcagtcg
gcgaacgaggagctccagtccgccaacgaagagctgcagacctccaacgaggagctgcag
gccaccaacgaagagctcaccaccgtcaacgaggagctcaatcagaagagcgccgagctc
gaatccgcgtggcaggccctggacaacgtccgcaacagcctcgccgatgcgctcgtggtg
gtggaccgcgggctgcgggtgatgctctggaacccggctgccgaggaggttttccactgg
tctgacgaccccaccggcagtgacctgaccggcatcccgcgggcggttaacctgccgcat
ttccggcgcgatctgcagcgcgtgctggcgagcggtgagccggtggagcgcgaggtgcgc
ggacgccagcgtcgtaaccgcgaggcgcgtatctggcgcctgcgcctgctgccgtacctg
gatgcgcgccagtccatcgcgggcgtgatcgtgacgctggtcgaggtcacggcgctgcgc
gccgcggaggcgagtcgccaggagagcgagcagcgcctcgccagcatcctgcgccaggcc
tcggtggcggtggtgctgcgcgaccgctggcggcgctacgtctacgtcaacgaggccttc
agccaggcctttggcgccgaggcgccgccaccggagagcgagcagccgccgcccggcctt
gatggcgagactgccgccgcgctggacgcgctggatgccgaggtccgtgccgggcgcacg
gtggcagagcgcgagctcgccacgccggcgggcgagcggcactttctcttcgaggccttc
ccggtgagtgcgggcgagggtggcgcggaatgggtctgcgccctgggcgtggagatcacc
cagcgccggcgcaacgaggcgcgcatccggctgcaggcggcagcgctggaggcggcgagc
ttcggcatcagcgtggtcgactgccgccagccggaccagccgctgagctacgtcaaccac
agcttcgagcgcatgaccggctacccgcgcagcgagattctcggccgcaactgccgcttc
ctgcagggcgccgagaccgatccggaccatcgggcccggctgcgcgaggccattgccgcc
ggccagtcctgcgaggtgcgcatcctcaactaccgtcgtgacggcgcgccgttctggaac
gaggtgagcctgtcgccggtaagggacgacagcggccgggtgacccattacgtgggcatc
cagaacgacatcaccgccgagatccacgcccgcgagtcgctcgcccgcagccgcgagcgc
cagcgcaaggcgctggagttcgccggcgtgggcaatttcgaatggcagccggggccggat
cgggtgaccggctcgccaaggttctgggagctcttcgggctctcgggcagcgaggcgcga
ccgctgccggcgctgctggggcgtctcggcagctcgccgcgtcgggtgctggagcagcgc
ctgcacgaggcactggataccggcgaggagatcgacgagcgcctgcaggtgatcgccagc
ggcgggggtcagcgctggctgcggctgcaggcacgcatcgaccgggacgaccgggagggt
ccgcgggtgctcgggctggtggcggacgtcaccctggagcgcgagatcgagaccgccatg
gccgaggcccgccgtaccgcggaggcggcgagtcgcgcgaagagccagttcctctccagc
atgagccacgagctgcgcacgcccctgaacgcggtgctcggcttctccgagctgctgctc
gaggaggatcgggaggcgcccctcgccgaggcgcagcgcgagtccgtggagcatatccgc
caggccggcgaccatctgctgcgactggtgagcgagatcctggatctggcgcgcatcgag
tccgggcgtcttgccctgagcctggtgccggtgagcctcgccgaggcgctgaccgagagt
gtgcagatgatccgccccgccgccgaggaggctgcgctgacgctggacatcgccgaggcg
ccggccggcctgcgggtgcaggcggacccgacgcggctgcagcaggtactgctgaacctc
ctctccaatgcggtcaagtacaaccggcggggcggccggcttgcggtcaccctgcgcgaa
gagccggggcgcgtcggcgtcgccgtcaccgacaccggcgagggcattgcaccggaggac
cagtggcgggtgttcgagcccttcgaccgcctcggccgggaccgcgaggccatcgagggc
acgggtattggtctggtggtcgcgcggcgcctgctggagggcatgggtggcgagctctcc
atggaaagcgtgcccggggagggcagcaccttcaccgcctggcttgtctcggtcacggcg
ctgctgcccgaggacgcgggctccgcgccgatactggccgaggcacgcctgcctccctgc
cggctgctatgcatcgaggatcagcccgccaaccgcgcgctgctgcggcagtgggcgcat
agccgcccggcggtcacgctggtggaggcggcggacggcgcggaaggtctgcgcgaggcc
cgcgagcaggggccggatgcgattctcctcgacctgcatcttcccggcgcgagcggctgg
gaagtcctgcgccagctgcgcgccgacgccgccacccgggatatccctgtgctcgcggtc
actgcggacgtccgcgaggaccgcgaggaagcgacccacagggcaggcttcgacggtttc
ctgggcaagcccttccagttccgcgagctggagcggctgctggccgacctgctgggctcg
tgcggcaaggcggcgggctga
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