Spiribacter halobius: LMH63_03795
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Entry
LMH63_03795 CDS
T09389
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
shai
Spiribacter halobius
Pathway
shai03030
DNA replication
shai03430
Mismatch repair
shai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMH63_03795 (holA)
03430 Mismatch repair
LMH63_03795 (holA)
03440 Homologous recombination
LMH63_03795 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shai03032
]
LMH63_03795 (holA)
03400 DNA repair and recombination proteins [BR:
shai03400
]
LMH63_03795 (holA)
Enzymes [BR:
shai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMH63_03795 (holA)
DNA replication proteins [BR:
shai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMH63_03795 (holA)
DNA repair and recombination proteins [BR:
shai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMH63_03795 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
DUF4703
Motif
Other DBs
NCBI-ProteinID:
UEX78778
LinkDB
All DBs
Position
834396..835436
Genome browser
AA seq
346 aa
AA seq
DB search
MSFISTDQLPNRLAQRLDPVYLIAGEEPLLVEEALGALRERVRAAGFGEREVLSVEAGFD
WSRLAGAAENLSLFAERRLIELRLPQGKPGQEGTRALQAFAKAPPADTVLVVICGRLDSR
QRSAAWVKALAGAGVVAYAWPVRSEALPRWAAARLRQRGLTADPEALDLLAERGEGNLLA
LSQEIDKLALLAGGGHLDVATVRGAVGDSARFAIFDLPEAALAGGLARTARICRGLREEG
EEPVLVLWALARELRVLAELQESARLRRSPDAVFGRHRTWRNRQGALWELARRAPAGAWV
ELARRTATADRVVKGAAAGRPWDELLQLSTDIARLAAAAGSDGKRP
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcatctccaccgaccagctccccaaccgcctggcccagcggctcgacccggtg
tatctgatcgcgggcgaggagccgctgctggtggaggaggcgttgggggcgttgcgggag
cgggtgcgggcggccgggttcggggagcgagaggtgctctcggtggaggcggggttcgac
tggtcgcggctggcgggggcggcggagaatctttcgctgttcgccgagcggcggctgatc
gagctgcgcctgccccagggcaagccggggcaggagggcacgcgcgccctgcaggccttt
gccaaggcaccgccggcggacaccgtgctggtggtgatctgcggtcgcctcgacagccgc
cagcgcagcgccgcctgggtcaaggcgctggccggggccggggtggtggcctacgcgtgg
ccggtgcgcagcgaggcgctgccgcgctgggccgccgcccgtctgcgccagcgcgggctc
acggccgatcccgaggcgctggacctgctcgccgaacgcggcgagggcaatctgctggcg
ctgtcccaggagatcgacaagctggccctgctcgccgggggcgggcacctggacgtcgct
accgtgcgcggcgcggtgggggacagcgcccgctttgccatcttcgatctgccagaggcc
gcgctggccggcggcctggcgcgcacggcgcgcatctgccgcgggctgcgcgaagagggg
gaagagccggtgctggtgctctgggcgctggcgcgggagctgcgggtgctggcggagctg
caggagagcgcccggctgcgccgctcgccggacgccgtgttcggccgccaccggacctgg
cgcaatcgtcagggcgcgctctgggagctggcgcggcgcgctccggccggcgcctgggta
gagctggcccgacgcacggccaccgctgatcgggtggtcaagggggcggcagcggggcgg
ccgtgggacgagctgttacaattgagcaccgatatcgccaggctcgccgctgcggcgggc
agtgacggaaagcgcccatga
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