Spiribacter halobius: LMH63_03940
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Entry
LMH63_03940 CDS
T09389
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
shai
Spiribacter halobius
Pathway
shai00550
Peptidoglycan biosynthesis
shai01100
Metabolic pathways
shai01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
shai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LMH63_03940 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LMH63_03940 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shai01011
]
LMH63_03940 (mrdA)
Enzymes [BR:
shai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LMH63_03940 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
shai01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LMH63_03940 (mrdA)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UEX78807
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All DBs
Position
complement(867778..869664)
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AA seq
628 aa
AA seq
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MSLDLLRDKAGESRVVRRRLLVAGIAVLLLMGLLAGRIAMLQVAGYQHYASLSQENRVRI
APAEPTRGLIYDRDGRLLAENVPAFRLTVIPEQVEDMDALLTGLQEIVELSATDIERFRD
LRERQRRFQEIPLKLRLSESEVARLAVNRHRFPGVEVKAHLTRFYPYGAIGSHAIGYVGR
ISEQELRQVDASQYRGSSVIGKSGVERFYEERLHGEMGLVRLETNALGRTLRTLERDPPV
PGEDLHLTLDIELQRVAETALGEHSGAVVAIDPRDGAVLALASQPGFDPNLFVTGITLED
FRGLQSQPGTPMFNRALRGRYPPGSVIKPFLGLAAAAHGTVDPDEEFQCNGLYRLPNVSR
PWRDWKRGGHGEIDLTQAIAQSCDIYFYDLAYEMGIDAMHEWMTGFGFGRPSGIDLPGEL
TGVMPSREWKRTNRGEPWYHGETVNTGIGQGYMLATPVQLAASTAMLANAGRPVRPHLVA
ATEAPGEDSASRLAPAEPLVAPVTLQNPALWEEAIGGMAEVMHGRRGTARAVAEDMPYRM
AGKTGTAQVFGLAPDEEYDEDEIPRELRDHALFIAFAPVGAPRIAVAVIAEHGGSGSGTA
APIARQVIDAWLLEQGELPDVAADVGER
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgatctgctgcgcgacaaggccggagagagccgcgtagtgcgccggcgtctg
ctcgtggcgggcatcgccgtgctgctgctgatgggcctgctcgccgggcgcatcgccatg
ctccaggtagcgggctatcagcactatgcgagcctctcccaggagaatcgggtccgcatc
gccccggcggagcccacccgcggcctcatctacgaccgcgacggccgcctgctcgccgag
aacgttccggcgttccgcctcaccgtgattccggagcaggttgaggatatggatgccctg
ctcaccggcctgcaggagatcgtcgagctctcggccaccgatatcgagcggttccgggat
ctgcgcgagcgccagcgccgcttccaggagatcccgctgaagctgcgcctgagcgagagc
gaggtggcccgcctggcggtcaaccgccatcgcttcccgggggtcgaggtcaaggcgcac
ctgacccgcttctacccctacggcgccatcggctcccacgccatcggctacgtcggccgc
atcagcgagcaggagctacggcaggtggatgcgagccagtaccgcggctcgagcgtcatc
ggcaagagcggcgtcgagcgcttctacgaggagcggctgcacggggagatgggcctggta
cggctcgagaccaacgccctcggccgcaccctgcgcaccctggagcgggatccgccggtt
ccgggcgaggatctgcatctgacgctggacatcgagctgcagcgcgtggccgagacggcc
ctcggcgagcacagcggcgcggtggtggcgatcgacccgcgggacggggcggttctggcc
ctggcgagccagcccggcttcgaccccaacctgttcgtgaccggaatcaccctggaggat
ttccgcgggctgcagagccagccgggcacgcccatgttcaatcgcgccctgcgtgggcgc
tacccgccggggtcggtgatcaagccgtttctcggcctcgcggccgcggcccacggcacc
gtggatccggacgaggagttccagtgcaacgggctctaccggctgcccaacgtcagccgg
ccctggcgcgactggaagcgtggcggccacggcgagatcgacctgacccaggccatcgcc
cagtcctgcgacatctacttctacgacctcgcctacgagatgggcatcgacgccatgcac
gagtggatgaccggtttcggcttcggccgccccagcggcatcgatctgccgggggagctc
accggcgtcatgccctcccgggagtggaagcggacgaaccgcggtgagccctggtaccac
ggcgagacggtgaacaccggcatcggtcaggggtacatgctcgccacgccggtgcagctc
gccgcctccaccgccatgctcgccaacgccgggcgtccggtgcgcccgcacctggtcgcg
gccacggaggcgcccggcgaggacagcgcctcgcgcctggcgccggcagagccgttggtc
gcgccggtgacgctgcagaacccggcactctgggaggaggcgatcgggggcatggccgag
gtgatgcacgggcgccgcggcaccgcccgcgccgtggccgaggacatgccctatcgcatg
gccggcaagaccggcacggcacaggtcttcggcctggcgccggacgaggaatacgatgag
gacgagatcccgcgggagttgcgcgaccatgcactgttcatcgccttcgccccggtgggg
gcaccgcgtatcgccgtcgccgtgatcgccgagcacggcggcagcggcagcggcaccgcc
gcgcccatcgcccgccaggtgatcgacgcctggctgctggaacagggagagctgcccgat
gtggctgccgacgtcggcgaacggtga
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