Spiribacter halobius: LMH63_04295
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Entry
LMH63_04295 CDS
T09389
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
shai
Spiribacter halobius
Pathway
shai00470
D-Amino acid metabolism
shai00550
Peptidoglycan biosynthesis
shai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shai00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LMH63_04295 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LMH63_04295 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shai01011
]
LMH63_04295 (murD)
Enzymes [BR:
shai01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LMH63_04295 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
shai01011
]
Precursor biosynthesis
Amino acid ligase
LMH63_04295 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
DAO
NAD_binding_8
2-Hacid_dh_C
Shikimate_DH
Pyr_redox_2
HI0933_like
Thi4
AdoHcyase_NAD
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
UEX78872
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All DBs
Position
934016..935362
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AA seq
448 aa
AA seq
DB search
MTAKRPGWDAVIVGLGETGLACARHLAARGRRVAVTDSRATPPRARALAAEHPEIPQALG
RLDASLLADAGEIVLSPGVDPRLPELQAAREAGVPMAGEIELFARVARAPVVAITGSNGK
STVTSLVGAMAEAAGLRTAVGGNLGTPALDLLAEPESELYVLELSSFQLETVASLDARVA
TVLNLSPDHLDRYPDIAAYAAAKQRIFRGHGLMVLNADDPQVAAMALAGRERRWFGLGPP
AGDEHYGLVRRAGETWLARGETPLLPTGALALPGRHNQANALAALALGEAAGLPEAAMLA
ALREFRGLPHRSEPVAERNGVLWVNDSKATNVGAAVAAIEGMERPVVLLAGGDGKGQDFG
ALATALRGRARAAVVFGRDAPRLVAALGDACPVTRVADLDAAVTAAAALSRAGDAVLLAP
ACASLDQFPDYRARGAAFRRAVEGLGDG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgacggcaaaacggccaggctgggatgcggtgatcgtcgggctcggcgagaccggcctc
gcctgtgcgcggcatctggcggcgcgcggccgccgggtggcggtcaccgacagccgggcg
acgccgccgcgggcccgggcgctggccgcggaacacccggagatcccccaggcgctgggg
cggctggatgcgtcgctgctggcggacgccggcgagatcgtgctgagcccaggggtcgat
ccccggctgccggagctgcaggcggcgcgcgaggcgggcgtgcccatggcgggcgagatc
gagctcttcgcccgggtcgcccgtgccccggtggtcgcgattaccggctccaacggcaag
agcacggtgacgagcctggtgggcgccatggccgaggccgccgggctgcggaccgcagtg
gggggcaacctcggcacgccggccctggatctgctcgccgagccggagtccgagctgtac
gtgctggagctttccagcttccagctggagacggtggcgagcctggacgcccgcgtggcc
acggtcctcaatctcagccccgaccacctggaccgctacccggacatagccgcctacgcg
gccgccaagcagcggatcttccgcggccacggtctgatggtgctgaacgccgacgacccc
caggtcgccgccatggcgctggccggccgtgagcgccgctggttcgggctcgggccgccg
gcgggggacgagcactacgggctggtgcggcgtgccggcgagacctggcttgcccgcggc
gagacgcccctgctgcccaccggcgcgctcgcgctccccggccgccacaaccaggccaac
gcgctggccgcgctcgccctcggcgaggcggcgggactgccggaggccgccatgctggcg
gcactgcgcgagttccgcggcctgccccatcgcagcgagccggtggccgagcgcaatggc
gtgctctgggtcaacgactccaaggccaccaacgttggcgccgccgtggccgccatcgag
ggcatggagcgccccgtcgtgttgctggcggggggcgacggcaaggggcaggacttcggc
gccctcgccacggccctgcgcgggcgggcgcgggcggcggtggtgttcgggcgcgacgcg
ccgcggcttgtggccgccctcggcgacgcctgcccggtgacgcgggtggcggatctggac
gcggcggtgacggcggcggcggcgctgagccgggccggcgatgccgtgctgctcgcgccg
gcctgcgccagtctcgatcagttcccggattaccgcgcccggggcgcggcgttccggcgc
gcggtggagggcctcggcgatggttga
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