KEGG   Sediminicurvatus halobius: LMH63_04675
Entry
LMH63_04675       CDS       T09389                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K07714  two-component system, NtrC family, response regulator AtoC
Organism
shai  Sediminicurvatus halobius
Pathway
shai02020  Two-component system
Brite
KEGG Orthology (KO) [BR:shai00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LMH63_04675
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:shai02022]
    LMH63_04675
Two-component system [BR:shai02022]
 NtrC family
  AtoS-AtoC (cPHB biosynthesis)
   LMH63_04675
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 AAA_16 AAA_3 Mg_chelatase AAA_2 Tnp_IS2_N AAA_18 HTH_23 HTH_50
Other DBs
NCBI-ProteinID: UEX78941
LinkDB
Position
complement(1010204..1011583)
AA seq 459 aa
MTMVRPSTSASPGAGAAPPPRVALVEDDPILGESLAEHLQLEGFRVDWYRTASAGYCGIA
AGGHDLLLSDVRLGDGHGRHLYERLQADAPENLPPAIFITAYADIDDAVALLKLGAADYL
TKPVDPERLVARLREICRCAGCAPARDPSPMGVSPAMRELEARLQAIARYRDMPVLILGP
TGVGKEVVARRLHELQGGTGRLVALNCAAVPEGLVETELFGQRRGAFTGAEHSRPGVFEQ
AAGGTLLLDEVGDMPEAMQAKLLRVLQDRTVTPVGGSEPIPVRARLVFATHRDLEADVAA
GRFRKDLYYRIHVVSLRVPPLAERPDDILWLAEGFLDQHRRRYPAEPRQLSPAAREALLA
HDWPGQVRELQHAIERACVFAAGPVLAPQDLFLERPPDGQAGASLSERLGASERAHLERA
LAANGWRITRTAEALGLSRKGLWQKMRRHGLQVPRAGGR
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgaccatggtacgaccttccacgtccgcatccccgggcgccggcgccgcgccgccgcct
agggtggcgctggtcgaggacgacccgatcctcggcgagtcgctggccgagcatctgcag
ctcgagggcttccgcgtcgactggtaccggacggcgtcggcgggctattgcggcatcgcc
gccggcggacacgatctgctgctgagcgatgtccgcctcggcgacggccacggccggcat
ctctacgagcggctgcaggcagacgcgcccgagaatctgccgccggcgatcttcatcacc
gcgtacgcggacatcgacgatgccgtcgccctgctcaagctgggcgcggcggactacctc
accaagccggtggacccggagcgcctggtcgcccggctgcgagagatctgccgttgcgct
ggctgcgccccagcgcgcgacccgagccccatgggcgtatcgcctgccatgcgggaactc
gaggcccggctgcaggctatcgcccgctaccgcgacatgccggtgctgatcctcggcccc
accggcgtcggcaaggaagtcgtcgcccggcgcctgcacgagctgcagggaggcaccggg
cggctggtggcgctcaactgcgcggcggtgccggaggggctggtcgagaccgagctcttc
ggccagcgccgcggcgcgttcaccggcgccgagcacagtcgccccggtgtcttcgagcag
gctgccggcggcacgctgctgcttgacgaggtgggcgacatgcccgaggccatgcaggcc
aagctgttgcgggtgcttcaggatcgcaccgtgacgccggtgggcggcagcgagccgatc
ccggtgcgggcccgcctggtctttgccacccaccgggacctggaggcggatgttgccgcc
gggcgcttccgcaaggacctctattaccgcatccacgtggtgagcctccgggtacccccg
cttgcggagcggcccgacgacatactctggctcgccgagggcttcctcgatcagcaccga
cggcgctatccggccgagccgcggcagctctcccccgccgcccgcgaggccctgctcgcc
cacgactggcccgggcaggtgcgcgagctgcagcacgcgatcgagcgcgcctgcgtcttc
gcggccggccccgtgctggcgccgcaggatctgttcctggagcgcccgccggacggccag
gcgggggcctcgctcagtgaacgcctgggagcgtccgagcgtgcccacctcgagcgcgcg
ctggcggccaacggctggcgcatcacccgcaccgccgaggccctggggctctcgcgcaag
gggctctggcagaagatgcggcgccatggcctgcaggtgccgcgtgcgggcgggcgctga

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