KEGG   Sediminicurvatus halobius: LMH63_05420
Entry
LMH63_05420       CDS       T09389                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
shai  Sediminicurvatus halobius
Pathway
shai03030  DNA replication
shai03430  Mismatch repair
shai03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:shai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LMH63_05420 (dnaQ)
   03430 Mismatch repair
    LMH63_05420 (dnaQ)
   03440 Homologous recombination
    LMH63_05420 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shai03032]
    LMH63_05420 (dnaQ)
   03400 DNA repair and recombination proteins [BR:shai03400]
    LMH63_05420 (dnaQ)
Enzymes [BR:shai01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LMH63_05420 (dnaQ)
DNA replication proteins [BR:shai03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LMH63_05420 (dnaQ)
DNA repair and recombination proteins [BR:shai03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LMH63_05420 (dnaQ)
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: UEX79084
LinkDB
Position
1182432..1183157
AA seq 241 aa
MRQIVLDTETTGLEPADGHRVIELGCFELSHRRPTGRTFHEYLNPERPVDAEAVEVHGLD
DAFLADKPRFAEVAQAFFEFIAGAELIIHNAPFDVGFLNHELSLLGEAWGRIEDHCGVTD
TLALAREMHPGQRNSLDALCRRYGVDNGGRTLHGALLDAEILAEVYLAMTGGQAALFLGD
EAGAGEGPARRGIRRLAAERPRLRVVQPDAEAQARHAAWLERLDEAAGGRCVWRALEAEG
E
NT seq 726 nt   +upstreamnt  +downstreamnt
atgcgacagatcgtcctggacaccgaaaccaccggtctcgagcccgccgacgggcatcgg
gtgatcgagctcgggtgcttcgagctgagtcatcggcggcccacggggcggacgttccac
gagtacctcaatccggagcggcccgtggatgccgaggcggtggaggtgcatggcctcgac
gacgccttcctcgccgacaagccgcgcttcgccgaggtggcccaggcgttcttcgagttc
attgccggggccgagctgatcatccataacgcgccgttcgacgtcggcttcctcaatcac
gagctctcgctgctgggcgaggcctggggccggatcgaggaccactgcggggtgacggac
acgctcgccctcgcccgggagatgcacccggggcagcgcaacagcctggacgcgctctgc
aggcgctacggtgtcgacaacggcggccgaaccctgcacggcgcgctgctggacgcggag
atcctcgccgaggtctacctggcgatgaccggcggccaggccgcgctcttcctcggtgac
gaggccggagcgggcgagggccctgcacggcgtggcatccgccggctcgcagcggagcgg
ccacgcttgcgggtggtccagcccgatgccgaggcacaggcgcgccatgcggcctggctg
gagcgcctcgacgaggccgcgggcgggcgctgcgtgtggcgcgccctcgaggcggagggc
gagtga

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