KEGG   Spiribacter halobius: LMH63_06800
Entry
LMH63_06800       CDS       T09389                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
shai  Spiribacter halobius
Brite
KEGG Orthology (KO) [BR:shai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shai03400]
    LMH63_06800
Enzymes [BR:shai01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LMH63_06800
    5.6.2.6  RNA 3'-5' helicase
     LMH63_06800
DNA repair and recombination proteins [BR:shai03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    LMH63_06800
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: UEX79342
LinkDB
Position
complement(1500615..1503059)
AA seq 814 aa
MKPEAGTALGDWFAGQGWTPADFQRATWAAYLAGRSGLVHSATGSGKSLAAWGGPLLEGL
ARADHDPPLRVLWVTPLRALASDTVTNLQAATDGVGLRWRVEKRTGDTGASARARQRRRP
PAALVTTPESLSLLLSYRRGGEAFRGLRAVVVDEWHELLGSKRGVQLELCLARLRALAPG
LRVWGLSATLGNTAEAQDVLLAGDPRGELIRGSEAKRIRIRGLLPGRHERFPWAGHLGVS
LLPQVLEHLGSARSCLLFTNTRSQAELWFEAILRARSDWLEGLGLHHGSIDRALRDRIEA
GLREGRFRCVVATSSLDLGVDFSPVDRVVQVGSPKGVARLAQRAGRCGHQPGAESEVLCV
PSHALELVEIAAARRAWDAGRIEGRTPLRGCLDVLAQHLVTLAAGDGFQPEALLAEVRTT
HAYRDLGDEAWQWVLDFVTGGGPVLAAYPDFRRVLRGDDGRYRIAGRAHAARHRMSIGTI
TSDAAIAVRFQGGGHLGTIEESFISRLRPGDTFLFAGRALELVRVRDLTAYVRRARGSRR
AVPRWQGGRLPLSTELADGVREILAEVRAGHLRDPETRAVADVLAIQQRWSALPGPGELL
AERVDSREGAHLFLYPFAGRLVHEGLAALIAWRLGRRQPATFSITVNDYGFELLADELPA
LDAETVRSLFHPEALVEDLLACVNASELARRQFRDIARIAGLVFQGYPGRGKSARQLQAS
SGLIYDTLARYDPDNRLLGQARDEVLERQLELQRLRRVLGDISDWRVRYHEPERLTPLAF
PLWADRLRNRLSTERWEDRVARMVARLEKAAGPA
NT seq 2445 nt   +upstreamnt  +downstreamnt
atgaagcctgaggccgggaccgcgctgggcgactggttcgccggccagggctggacgccg
gcagacttccagcgggccacctgggccgcctacctcgccgggcgcagcggcctggtgcac
tcggccaccggctccggcaagtcgctggccgcctggggcggcccgctgctggagggtctg
gcccgcgccgaccatgacccgcccctgcgggtgctctgggtgacgccgctgcgggcactc
gccagcgacacggtgaccaacctgcaggcggcgacggacggcgtcggcctgcgctggcgg
gtggagaagcgcaccggggataccggcgccagcgcccgcgcccgccagcgccggcggccc
ccggcggcgctggtcaccaccccggagagcctgtcgctgctgctctcctaccggcgcggt
ggcgaggcctttcgcgggctgagagcggtggtggtggacgaatggcacgagctcctcggc
agcaagcgcggcgttcagctcgagctctgcctcgcgcgcctgcgggcgctggcaccgggg
ctgcgcgtctgggggctgtccgcgaccctcggcaacaccgcggaagcgcaggacgtgttg
ctggccggcgatccccgtggtgagctcatccgcggcagcgaggccaagcgcatccgcatc
cgcgggctgctgcccgggcgccacgagcgtttcccctgggcgggacatctcggcgtcagc
ctgctgccgcaagtgctcgagcacctggggagcgcgcgctcctgtctgctcttcaccaac
acccgctcccaggcggagctgtggttcgaggcgatcctgcgcgcccgcagcgactggctc
gagggcctcggcctgcaccatggctccatcgaccgggcgctgcgcgaccgcatcgaggcg
ggcctgcgcgaggggcgcttccgctgcgtggtggccacctcgagcctcgacctcggcgtg
gacttcagcccggtggaccgggtggtccaggtaggcagccccaagggcgtggcccggctc
gcacagcgtgccgggcgctgcggccaccagccgggcgcggagagcgaggtgctgtgcgtg
ccgagccatgccctggagctggtggagatcgccgccgcccgccgtgcctgggacgccggg
cgcatcgagggtcggacgccgctgcgcggctgcctggacgtcctcgcccagcatctggtc
acgctggcggccggggacggcttccagccggaggcgctgctggccgaggtccgcaccacc
cacgcctaccgcgacctcggcgacgaggcctggcaatgggtgctggacttcgtcaccggc
ggaggcccggtgctggcggcctaccccgatttccggcgcgtgctgcgcggcgacgacggc
cgctaccggatcgccggccgcgcccacgcggcccggcaccgcatgagcatcggcaccatc
accagcgacgcggccatcgccgtgcgcttccagggcggcggccatctcggcaccatcgag
gagagcttcatctcccggctgcggcccggcgataccttcctgttcgccggacgcgccctg
gagctggtgcgggtgcgcgatctcaccgcctacgtccgccgcgcccggggcagccgccgc
gcggtgccccgctggcagggcggacgactgccgctgtccacggagctcgccgacggcgtg
cgcgagatccttgccgaggtgcgtgccggccatctgcgggacccggagacccgtgcggtg
gcggacgtcctcgccatccagcagcgctggtccgcactgccgggtcccggcgagctgctc
gccgaacgggtggacagccgcgagggggcgcacctgttcctgtatccctttgccgggcgg
ctggtgcacgagggcctggcggcgctgatcgcctggcgactcggccggcgtcagcccgcc
accttcagcatcacggtgaacgactacggcttcgagctgctggcggacgagctcccggcg
ctggacgccgagacagtgcgcagcctgttccacccggaggcgctggtggaggacctgctc
gcctgcgtcaacgcgagcgagctcgcccgccgccagttccgggacatcgcccgcatcgcc
gggctggtgttccagggctatcccggccgcggcaagtcggcgcgtcagctgcaggcctcc
agcggcctcatctacgacaccctcgcccgctacgacccggacaaccggctgctcggccag
gcccgggacgaggtactggagcgccagctggagctgcagcggctgcgccgggtgcttggc
gacatcagcgactggcgggtgcgctaccacgagcccgagcggctcacaccgctcgccttc
ccgctctgggccgaccggctgcgcaaccgtctcagcaccgagcgctgggaggaccgggtg
gcgcgcatggtggcgcggctcgagaaagcggcggggccggcatga

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