Sediminicurvatus halobius: LMH63_07060
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Entry
LMH63_07060 CDS
T09389
Symbol
rsgA
Name
(GenBank) ribosome small subunit-dependent GTPase A
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
shai
Sediminicurvatus halobius
Pathway
shai00730
Thiamine metabolism
shai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shai00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LMH63_07060 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shai03009
]
LMH63_07060 (rsgA)
Enzymes [BR:
shai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
LMH63_07060 (rsgA)
Ribosome biogenesis [BR:
shai03009
]
Prokaryotic type
GTPases
LMH63_07060 (rsgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
AAA_16
nSTAND1
MMR_HSR1
ABC_tran
nSTAND3
NACHT
AAA_22
DUF815
AAA
AAA_29
Roc
AAA_5
TsaE
AAA_25
Hpr_kinase_C
AAA_33
Sigma54_activat
VapE-like_dom
SRPRB
RNA_helicase
AAA_18
Septin
AAA_7
Ras
Motif
Other DBs
NCBI-ProteinID:
UEX79393
LinkDB
All DBs
Position
complement(1557054..1557953)
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AA seq
299 aa
AA seq
DB search
MNGEQAGLVVASFGSDCIVEAADGRLLRCHLRRRGGRSARPVCGDRVVWRESGGEGVVER
IEPRVSVIERGDFRGRPRPLAANVTRLVVVLADPPGLDTRLLDRYLVLTHSLSLAALIFL
NKADQLDTAGRARVTAALAPYEALGERILTGSAATGAGLAELRQALAEETVILVGQSGVG
KSSLARALVPDLDVRTGTLSETSGQGRHTTSTTTLHPLPGGGCLIDSPGVRTLRLEHFPP
EAITRGFPEITERAGQCRFRDCRHDREPGCAVRAALARGEIHPERLASWRSLLAKGGGA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaacggggaacaggccgggctggtcgtggcaagctttggcagcgactgcatcgtcgag
gcggccgacggccgtctgctgcgctgccatctgcgccgccgcggcggccgctcggcgcgg
ccggtgtgcggcgatcgcgtggtgtggcgggagagcggtggcgagggcgtggtcgagcgc
atcgagccgcgggtgagcgtcatcgagcgcggcgatttccgcgggcggccgcgcccactg
gcggccaacgtcacccggctcgtggtcgtgctcgccgacccgccgggcctcgatacgcgt
ctgctggaccgctacctggtcctgacgcactcgctctccctggcggcgctgatcttcctc
aacaaggccgaccagctggacacggccgggcgggcgagagtgacggcggccctggcgccc
tacgaggctctcggagaacgcatcctcaccggcagcgcggccaccggcgccgggctggcg
gagctgcgacaggcgctcgccgaggagacggtgatcctggtcgggcagtccggggtgggc
aaatcatcgctcgcccgcgccctggtgccagacctcgacgtgcgtaccgggaccctgtcc
gaaaccagcggccagggccggcacaccaccagcaccacgacgctgcatccgctgcccggc
ggtggctgcctgatcgattcccccggtgtacgcacgctgcgcctcgagcacttcccgccc
gaagcgatcacgcgtggattcccggagatcaccgaacgcgccgggcagtgccggttccgc
gactgccgccatgaccgcgagccgggctgcgccgtgcgcgccgccctcgcccgcggcgag
atccatccggaacggctggccagctggcgatccctgctggccaagggtggcggtgcctag
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