Sediminicurvatus halobius: LMH63_07065
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Entry
LMH63_07065 CDS
T09389
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
shai
Sediminicurvatus halobius
Pathway
shai03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
shai00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LMH63_07065 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shai03019
]
LMH63_07065 (orn)
03009 Ribosome biogenesis [BR:
shai03009
]
LMH63_07065 (orn)
Messenger RNA biogenesis [BR:
shai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LMH63_07065 (orn)
Ribosome biogenesis [BR:
shai03009
]
Eukaryotic type
Pre-60S particles
RNases
LMH63_07065 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UEX79394
LinkDB
All DBs
Position
1558055..1558615
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AA seq
186 aa
AA seq
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MPHSPENLIWIDLEMTGLDTDRDQVIEIATIVTDRDLAVLAEGPVLAIRQPESVLAGMDE
WNRTQHGNSGLIERVQRSDVDEAEAERRTLAFLRQWVPPGVSPMCGNSICQDRRFLHRCM
PELERYFHYRNLDVSTLKELARRWAPDLLQGFSKKSSHLALDDIRDSIAELRHYREHFLR
VNRADD
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgcctcactccccggagaacctgatctggatcgatctggagatgacgggcctcgacacg
gaccgggatcaggtcatcgagatcgcgaccatcgtcaccgatcgcgatctggccgtgctt
gccgaagggcccgtgcttgcgattcggcagccggagtcggtcctcgccggtatggacgag
tggaaccgcacccagcatggcaactccgggctgattgagcgagtacagcgcagcgacgtg
gacgaggccgaggcggagcgccgcacccttgccttccttcgccagtgggtgccgccaggc
gtctcgcccatgtgcggcaacagcatctgtcaggaccggcgttttctgcaccgctgcatg
ccggagctcgagcgctatttccactatcgcaacctggacgtcagcaccttgaaggagctc
gcgcgccgctgggcgccggacctactccagggcttcagcaagaaaagctcccacctggcc
ctcgacgacatccgcgactccatcgccgagctgcgccactaccgcgagcacttcctccgg
gtgaaccgcgccgacgattga
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