Sediminicurvatus halobius: LMH63_07890
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Entry
LMH63_07890 CDS
T09389
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
shai
Sediminicurvatus halobius
Brite
KEGG Orthology (KO) [BR:
shai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shai03016
]
LMH63_07890 (truB)
Enzymes [BR:
shai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LMH63_07890 (truB)
Transfer RNA biogenesis [BR:
shai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LMH63_07890 (truB)
Prokaryotic type
LMH63_07890 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UEX79555
LinkDB
All DBs
Position
1742090..1743001
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AA seq
303 aa
AA seq
DB search
MPRKGRPVSGILLLDKPAGETSNRALQRVRRLLQARKAGHTGSLDPLATGLLPLCFGEAT
KVSGCLLDASKRYEVTARFGVTTDTADAEGETLERRPVPALDRPGVEAALAGLRGEQDQV
PPMYSAVKHQGRRLYELARSGVEVPRAARRITVHALELAWLAGEEAGLRVHCSKGTYVRT
LVADLGEALGCGAHVTALRRTALGPFEAPGMVTLETLEQRAADGPAALDELLLPPDTAIA
DWPAVVLGPETAPYLRQGQAVWIPRAPAPGAVRLYGPEGFLGMGLVLDDGRVAPRRLLAV
PEG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcaagggccgcccggtcagcggcattctcctgcttgacaaacccgccggcgag
acctccaaccgcgccctgcagcgggtgcgccggctgctgcaggcgcgcaaggccgggcat
accggcagcctggacccgctcgccaccggcctgctgccgctctgtttcggcgaggccacc
aaggtcagcggctgcctgctggacgcctcgaagcgctacgaggtcaccgcgcgcttcggc
gtgaccaccgacaccgccgacgccgaaggcgagacgctggagcgccggccggtgccggcc
ctggaccggccaggagtggaggcggcgctggccggcctgcgcggcgagcaggaccaggtg
ccgcccatgtactcggcggtaaagcatcagggccgccgcctctacgaactggcccgctcc
ggggtggaggtgccgcgggccgcccgccggatcaccgtgcatgccctggagctggcctgg
ctcgcgggcgaggaggcgggcctgcgtgtgcactgctccaagggcacctatgtgcgcacg
ctggtggcggatctcggcgaggcgctcggctgcggcgcgcacgtcaccgcgctgcggcgc
acggcgctcggccctttcgaggcccccggcatggtgaccctggagacgctggagcagcgt
gccgcggatggtccggcggcgctggacgagctgctgctgccgccggatacggccatcgcc
gactggccggcggtggtgctcggccccgagaccgcgccgtatctgcgccagggccaggcg
gtctggattccgcgggcgccggcgcccggcgcggtgcggctgtacgggccggaggggttc
ctcggcatgggcttggtgctggatgacggcagggtggcaccgcggcgcctgctcgcggtc
cccgaaggctga
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