Sediminicurvatus halobius: LMH63_08815
Help
Entry
LMH63_08815 CDS
T09389
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
shai
Sediminicurvatus halobius
Pathway
shai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LMH63_08815 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shai03400
]
LMH63_08815 (recC)
Enzymes [BR:
shai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LMH63_08815 (recC)
DNA repair and recombination proteins [BR:
shai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMH63_08815 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UEX79885
LinkDB
All DBs
Position
1935637..1939071
Genome browser
AA seq
1144 aa
AA seq
DB search
MVIHGNRLEDLRALAVEWLRRHPLAPLENEIFLVQSNGIAQWLKLALARAPEAPEGGCGI
AAAVDVQLPARFLWSAYRGVLGADAVPAESPFAKEALTWRLMRLLPDLLHDPVFAPLQRF
LSDDHDRRKRHQLALRLADLLDQYQVYRADWLSDWAEGRDVLRDARGHEAALAADHAWQP
ALWRAVLADLPASARQRSRAAVHEAFLRAAGELTARPPGLPRRVIVFGISSLPRQSLEAL
EALAGVSQVLLCVHNPCEHFWADIVPDRELLTGPRRRQARRPDMPADLSPEALHGHAHPL
LAAWGKQGRDYIRLLDEHDDPERYRALFRTLSWQRIDLFEPHGEDCLLHQLQEDIRDLRP
LSETRERWPAVPAEDDSIRFQIAHSPQREVEALHDRLLDCFSADPTLRPRDVIVMVPDVD
RYAPHIEAVFGRLDPDDPRYIPFTVADRGRRGQAPLLIALEQLLRLPEARVAVSEVLDLL
DVPALRRRFGLAEAALGRLHGWVEGAGVRWGLHARQRAALGLPDGFEQNSWAFGLRRMLL
GYAVGEADPWQGIEPFAEVGGLEAAELGPLADLLETLDRWWQALAAEATPADWAVRLRAL
LDDCFHAAGEDDQLLLDRLLEALDDWESTCAEAGLEEPLPLAVVREHWLAAVDAPSLSRR
FLAGAVNVCTLMPMRAIPFRVVCLLGMSDGDYPRSPQPVDFDLMARDYRPGDRSRREDDR
YLFLEALLSARERLLVSWVGRSVQDNTARPPSVLVGQLRDHLAAGWRSAEGADLLAQLTV
DQPLQPFSPALFPVEDDARLFTYAREWQAVHRSVAPTPPPARLPAVSPTEPLAPAVLGRF
LASPPRAFFTGRLQVVLEDEAATAEDLEPFAVEGLGAWQLRRQLADVALAPLPPDAAAAR
SRLDAGLERLRRSGALPPAAPGEAAAAALAEAVTPLLDGVLEWCEAYPERVSPEAALRFE
HAGVVVEAWPEGLRRAADGRTLQLAHSVGRLRIGSRPYWRYDSAAPSWVAHLLACTVVGP
VTTVLVAADAALRLDPLTAEAAGEHLRALMEAWLEGQREPLPVTCQSACAWLEALTLERD
AQADAASVYAGQGQQSGEVDHSPYLARAFPTAEALLADSRFPALAERLYRPLHAALQTPP
EASA
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggtaattcacggcaaccgcctggaggacctgcgggcgctcgccgtggagtggctgcgc
cggcatccgctggcgccgctggagaacgagatcttcctggtccagagcaacggcatcgcc
cagtggctgaagcttgccctggcgcgggccccggaggcgccggagggcggctgcggcatc
gccgcggcggtggatgtgcagctgccggcccgctttctctggagcgcgtatcgtggcgtg
ctcggggccgatgccgtgccggccgagtcgcctttcgccaaggaggcgctcacctggcga
ctgatgcgcctgctgcccgacctgctgcacgatcccgtcttcgcgccgctgcaacgcttc
ctcagtgatgaccacgaccggcgcaagcgtcatcagctcgccctgcggctcgccgatctg
ctggaccagtaccaggtgtatcgcgccgactggctctccgactgggccgaggggcgggac
gtactgcgcgatgcccgcggccatgaggccgcgctggcggcggatcacgcctggcagccc
gcgctctggcgcgcggtgctggccgatctccccgcttccgcgcggcagcgtagccgggcc
gccgtacacgaggcctttctgcgcgccgccggcgagctcactgcgcgcccccccgggctg
ccgcgccgggtcatcgtcttcggcatctcctcgctgccgcggcagagcctggaggcactg
gaggcgctggcgggggtcagccaggtgctgctctgcgtgcacaatccctgcgagcacttc
tgggcggatatcgtccccgaccgggagctcctcaccggcccacgccggcgccaggcgcga
cgcccggacatgcctgccgacctctccccggaggccctccacggccatgcccacccgctg
ctcgccgcctggggcaagcaggggcgggactatatccggctgctcgacgagcacgacgat
cccgagcgctatcgggcgctgttccgtacgctctcctggcagcggatcgatctgttcgag
ccccatggcgaggactgcctcctgcaccagctgcaggaggatatccgcgacctgcgcccc
ttgagcgagacgcgcgagcgctggccggcggtacccgcggaggacgactccatccgcttc
cagatcgcccacagcccccagcgcgaggtggaggccctgcacgatcggctgctggactgc
ttctccgccgatccgaccctgcgcccgcgggatgtcatcgtcatggtccccgacgttgac
cgctacgcgccccatatcgaagcggtgttcgggcgtctcgacccggacgacccgcgctac
atccccttcaccgtggccgaccgcggccggcgcggtcaggcaccgctgctgatcgccctg
gagcagctgctgcgcctgccggaggcccgtgtggcggtgagcgaggtgctggacctgctc
gacgtgcccgcgctgcgccggcgcttcggcctggcggaggcggcactcgggcgcctgcat
ggctgggtcgagggggccggcgtgcgctgggggctgcatgcccgccagcgcgcggccctg
ggactgcccgatggtttcgagcagaacagctgggccttcggcctgcggcgcatgctgctc
ggctatgccgtgggcgaggccgacccctggcagggcatcgaaccctttgcagaggtcggg
gggctggaggccgccgagctcggcccgctggcggacctgctggagaccctggaccgctgg
tggcaggccctggccgcggaggccacgcccgccgactgggcggtgcgcctgcgggcgctg
ctggacgactgcttccatgccgccggagaagacgatcagctcctcctcgatcggctgctg
gaggcccttgacgactgggagtcgacctgcgccgaggcggggctcgaggagcccctgccg
ctcgccgtggtccgggagcactggctcgccgccgtcgatgcgccgagcctcagccggcgc
ttcctggccggggcggtcaacgtctgcacactcatgccaatgcgcgccatccctttccgc
gtggtctgcctgctcggcatgagcgacggcgactacccgcgcagcccgcagccggtggac
ttcgacctcatggcccgggactatcgccccggcgaccgctcgcgccgcgaggacgaccgt
tatctcttcctggaggcgctgctctcggcccgcgagcggctgcttgtgagctgggtcggg
cgcagcgtgcaggacaatacggcgcggccgccgtcggtgctggtgggccagctgcgggat
catcttgccgccggctggcgctcggcggagggcgccgatctgctggcgcagctcaccgtg
gatcagccgctgcagcccttcagccccgcgctgttcccggtggaggacgatgcgcggctg
ttcacctacgcccgggagtggcaggccgtccaccggagcgtggcgccgaccccgccaccg
gcacggctgccagcggtgagcccgacggagccgcttgcccccgcggtgctcgggcgcttt
ctggccagcccgccccgggcgtttttcaccgggcgactgcaggtggtgctggaggacgag
gcggcaacggccgaggacctggagcccttcgccgtggaagggctgggtgcctggcagctg
cgccggcagctcgccgacgtcgcgctcgctcccttgccgccggatgccgcagcggcgcgg
agccggctggacgccgggctggagcgtctgcggcgcagcggtgcgctgccgccggcggcg
ccgggggaggcggcggcagcggcgctggcggaggcggtgacaccgctcctggacggggtg
ctcgagtggtgcgaggcctatccggagcgggtctctcccgaggcggcgctgcgcttcgag
catgccggcgtcgtggtcgaggcctggccggagggcctgcgccgggccgcagacgggcgc
accctgcagctcgctcacagcgtcggccggctgcgcatcggcagccggccctactggcgc
tacgacagcgcggcgccctcctgggtcgcccacttgctggcctgcacggtggtcgggccg
gtcaccaccgtgctggtggccgcggacgccgcgctgcggctcgacccgctcaccgccgag
gccgccggcgagcacctgcgagcgctgatggaggcctggctcgagggccagcgcgagccg
ttgccggtgacctgccagagcgcctgcgcctggctggaggcgctgaccctcgagcgcgac
gcccaggccgacgcggccagcgtctatgccggccagggccagcagagcggtgaggtggac
cacagcccctatctcgcccgggccttccccaccgccgaggcgctgctcgccgacagccgt
tttccggctttggccgagcgcctttaccggcccctgcatgcggccctgcagacgccgccg
gaggcctcggcatga
DBGET
integrated database retrieval system
