Spiribacter halobius: LMH63_10675
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Entry
LMH63_10675 CDS
T09389
Name
(GenBank) hypothetical protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
shai
Spiribacter halobius
Pathway
shai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LMH63_10675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shai03400
]
LMH63_10675
Enzymes [BR:
shai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LMH63_10675
DNA repair and recombination proteins [BR:
shai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LMH63_10675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
UEX76427
LinkDB
All DBs
Position
2340969..2341865
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AA seq
298 aa
AA seq
DB search
MTAVPAQPVTLTLPAPLDFAATLAPLRSHGDDGLDRWADGRLLRAATVAAGGVAYCARPR
PEERRPVVEVHAQGPGAAAAPELVARAFAPTPGGWSELLARDPLLARLAGEFPGWRPLRQ
PDLFAALVRAISAQQVNLRWAATTRRRLAEAFGEPWVIGGETVYRLDPTTFAALDPARIR
ALQFTTRKAEYIVGVAAEIARGRLSLPALEVLDDTAVIERLAALRGIGRWTAEWILVRTL
GRPRVVAGDLGVRKAVGLAYGSGDPPAEAEVRRLTAHWGPCAELAQGLLLQGLASDLL
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgacggcagttccggcccagcccgtgactctgacgctaccggcgccgctggacttcgcg
gcgacgctggcaccgctgcgaagccacggcgacgacggcctcgaccgctgggccgacggc
cggctgctgcgggctgccaccgtggcggcgggcggcgttgcctactgcgcgcgaccgcgg
ccggaggaacggcgcccggtggtcgaggtgcacgcccagggtccgggcgccgcggcggcg
ccggagctggtcgcgcgggcgttcgcgccgaccccgggagggtggtccgagctgctggca
cgagacccgctgctggcgcggctcgccggcgagttcccgggctggcgcccgttgcgccag
ccggacctgttcgcggcgctggtccgggcgatcagcgcgcagcaggtgaacctgcgctgg
gcggcgaccacccggcggcggctcgcagaggccttcggcgagccctgggtaatcggtggc
gagacggtctatcgtctcgacccgacgacgttcgccgcgctggatcccgcccgcattcgg
gcactgcagttcacgacccggaaggccgaatacatcgtcggcgtggcggcggaaatcgcc
cggggccggctgagcctcccggcgctggaggtgctggacgacacggcggtgatcgagcgt
ctcgccgctctgcggggcatcggacgctggacggcggagtggattctggtgcgcaccctc
ggccgcccgcgggtggtggccggggatctcggggtacgcaaggcagtgggtctcgcctac
ggtagcggcgacccgcccgcggaggcggaggtgcgccggctgacggcgcactggggcccc
tgtgccgagctcgcccaggggctgctgctccagggcctggcgagcgacctgctgtag
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